BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487771 Length=863 Score E Sequences producing significant alignments: (Bits) Value AT5G09540.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 1096 0.0 AT5G64360.3 | Symbols: | Chaperone DnaJ-domain superfamily pro... 340 1e-92 > AT5G09540.1 | Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:2962216-2963264 REVERSE LENGTH=1049 Length=1049 Score = 1096 bits (593), Expect = 0.0 Identities = 784/871 (90%), Gaps = 34/871 (4%) Strand=Plus/Plus Query 1 ATGGTAA--G-CGGCGGCGGCGATAATAACAGAGCGGAGGCGGATCAGTGGCTTGCTACA 57 ||||||| | |||||||||||| ||||||||||||||||| ||||||| |||||||||| Sbjct 1 ATGGTAAGCGACGGCGGCGGCGAGAATAACAGAGCGGAGGCAGATCAGTTGCTTGCTACA 60 Query 58 TCGGAGAAGCTCTTGGCCTCAAGTGACTTTCATGGAGCTAAGACATTTGCGATCCGTGCA 117 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 TCGGAGAAGCTCTTGGCTTCAAGTGACTTTCATGGAGCAAAGACATTTGCGATCCGTGCA 120 Query 118 TGCGAAGCTGACCCGTCTCGAACAGACGCAGCGGACTATATCCTCGCCATCGCCGACACT 177 |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 TGCGAAGCTGACCCATCCCGAACAGACGCAGCTGACTATATCCTCGCCATCGCCGACACT 180 Query 178 CTCCTCGCCGGAGAAACTACCATCGGAGATTCGAAAGTAACAGACTGGTACGCGGTACTT 237 |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| Sbjct 181 CTCCTCGCCGGAGAAACTACAATCGGAGATTCCAAAGTACCAGACTGGTACGCGGTACTT 240 Query 238 CGACTCAGCCGCCTAACTCGAAACCCC-GAACACGTCGCGACTCAGTACCGTAGACTCAC 296 ||| ||||||||||||| | ||| ||| |||||||||||||||||||||||||||||||| Sbjct 241 CGAATCAGCCGCCTAACCC-AAAGCCCTGAACACGTCGCGACTCAGTACCGTAGACTCAC 299 Query 297 TCTTCTCCTCAATCTCAATGTCAATCGTCTTCCTTTCGCCGATCAAGCGCTTAAGCTAGT 356 |||||||||||| |||||| |||||||||||||||||||||||||||||||||| || || Sbjct 300 TCTTCTCCTCAAACTCAATATCAATCGTCTTCCTTTCGCCGATCAAGCGCTTAAACTCGT 359 Query 357 CTCCGATGCTTGGT-TAGTCCTCTCTGATCCTCCAAGGAAATCAATGTATGATCGAGAGT 415 |||||||||||||| | ||||||||||||||||||||||||||||| || |||||||||| Sbjct 360 CTCCGATGCTTGGTAT-GTCCTCTCTGATCCTCCAAGGAAATCAATTTACGATCGAGAGT 418 Query 416 TTAAGCTGAGTCAATTTGGTCAACCTTATAGTTATAGCCAATCAGAGCAATTTCAAGATT 475 | ||||||||||| ||||||| | | | | || |||||||||||| Sbjct 419 TGCAGCTGAGTCAAACTGGTCAATC-----G-----G--A----GA--AATTTCAAGATT 460 Query 476 CGCCATTGCAGAGCCAAGGTGAGACCATGGAGAATCCTACGGCTACGAGCTTCTGGACTG 535 |||||||||||||||||| ||||||| ||||||||||||| ||||| ||||| ||||| | Sbjct 461 CGCCATTGCAGAGCCAAGCTGAGACCTTGGAGAATCCTACAGCTACAAGCTTTTGGACCG 520 Query 536 CTTGTCCTTATTGTTTTTCACTTTTTGAGTACCCAAAGGGTTACGAGGAATGCACATTGA 595 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 521 CTTGTCCTTACTGCTTTTCACTTTTTGAGTACCCAAAGGGTTACGAGGAATGCACATTGA 580 Query 596 GGTGTCAGCAATGTAGGAAAGCGTTTGAAGCGGTTAAAACGCAAACGCCACCAGTGGAGA 655 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 581 GGTGTCAGCAGTGTAGGAAAGCGTTTGAAGCGGTTAAAACGCAAACGCCACCTGTGGAGA 640 Query 656 GTAATGGTGAAGGCGTTTACGTTTG-TTCTTGGGCTATGTTCCCTGTAGGGTTATCAAGT 714 |||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct 641 GTAATGGTGAAGGCGTTTAC-TTTGGTTCTTGGGCTATGTTCCCTGTAGGATTAACAAGT 699 Query 715 CATGCTAAAACCTCTAATTGGTCGCCAATTTCACATCTTTCCGTCTGCACAGGGCAAAGA 774 ||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 700 CATCCTAACACCTCTAATTGGTCGCCAATCTCACATCTTTCCGTCTGCACAGGGCAAAGT 759 Query 775 TCATGTGATCAGCAATCGAAGGCTCTTCCACGAAACG--ATGATGCTGATGATGTTGACA 832 |||| |||||||||||| || | || | | || | || | ||||||||||||| Sbjct 760 TCATCTGATCAGCAATCAAA---T-TTGAAGGCTACTCCAAGAAAC-GATGATGTTGACA 814 Query 833 TATATATTACAATTTCTGATGATGATTAAAG 863 |||||||| |||||||||||||||||||||| Sbjct 815 TATATATTGCAATTTCTGATGATGATTAAAG 845 > AT5G64360.3 | Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:25737071-25738667 REVERSE LENGTH=1597 Length=1597 Score = 340 bits (184), Expect = 1e-92 Identities = 347/424 (82%), Gaps = 18/424 (4%) Strand=Plus/Plus Query 24 TAACAGAGCGGAGGCGGATCAGTGGCTTGCT-ACATCGGAGAAGC-TCTTGGCCTCAAGT 81 |||||||| |||||||||||||||||||| | ||||||||||||| || | || || ||| Sbjct 104 TAACAGAGTGGAGGCGGATCAGTGGCTTG-TAACATCGGAGAAGCTTC-TAGCGTCTAGT 161 Query 82 GACT-TTCATGGAGCTAAGACATTTGCGATCCGTGCATGCGAAGCTGACCCGTCTCGAAC 140 || | |||| ||||| ||||||||||||||||| |||||||||||||||||| | ||| | Sbjct 162 GA-TCTTCAAGGAGCAAAGACATTTGCGATCCGCGCATGCGAAGCTGACCCGACCCGAGC 220 Query 141 AGACGCAGCGGACTATATCCTCGCCATC-GCCGACACTCTCCTCGCCGGAGAAACTAC-C 198 ||| || || ||||| |||||||| ||| | ||||| ||| ||||||||||| ||| | Sbjct 221 AGAAGCTGCAGACTACATCCTCGCAATCTG-CGACATTCTTCTCGCCGGAGAGACT-CGT 278 Query 199 ATCGGAGATTCGAAAGTAACAGACTGGTACGCGGTACTTCGACTCAGCCGCCTAACTCGA 258 | || ||||| || | ||||||||||||| || || |||||| | || || ||| | Sbjct 279 TTAGGTGATTCCAACTTGCCAGACTGGTACGCCGTTCTCCGACTCGGTCGTTTAGCTCAA 338 Query 259 AACCCCGAACACGTCGCGACTCAGTACCGTAGACTCACTCTTCTCCTCAATC-T-CAATG 316 ||||| |||||||||||||||||||||||||||||| ||||||||||||||| | | | Sbjct 339 AACCCTGAACACGTCGCGACTCAGTACCGTAGACTCGCTCTTCTCCTCAATCCTTCCGT- 397 Query 317 TCAATCGTCTTCCTTTCGCCGATCAAGCGCTTAAGCTAGTCTCCGATGCTTGGTTAGTCC 376 | |||||||| || |||||||||| ||| ||||| | ||||||||||||||||| || | Sbjct 398 T-AATCGTCTCCCATTCGCCGATCGAGCTCTTAAAATCGTCTCCGATGCTTGGTTCGTTC 456 Query 377 TCTCTGATCC-TCCAAGGAAATCAATGTATGATCGAGAGTTT-AAGCTGAGTCAATTTGG 434 |||||||||| | |||| |||||| | || || ||||| || || || |||||| | || Sbjct 457 TCTCTGATCCGTTCAAG-AAATCATTCTACGACCGAGAATTGCAA-CTTAGTCAACTCGG 514 Query 435 TCAA 438 |||| Sbjct 515 TCAA 518 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42096215186 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5