BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487791
Length=1474
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09690.2 | Symbols: ATMGT7, MGT7, MRS2-7 | magnesium transpo... 2002 0.0
AT5G09720.1 | Symbols: | Magnesium transporter CorA-like famil... 1098 0.0
AT4G28580.1 | Symbols: ATMGT5, MGT5, MRS2-6 | magnesium transpo... 58.4 2e-07
> AT5G09690.2 | Symbols: ATMGT7, MGT7, MRS2-7 | magnesium transporter
7 | chr5:3000814-3003500 REVERSE LENGTH=1455
Length=1455
Score = 2002 bits (1084), Expect = 0.0
Identities = 1255/1337 (94%), Gaps = 13/1337 (1%)
Strand=Plus/Plus
Query 144 GGCATTGGGTTTAAGCAGTGAAGAATTGGAGATGTCACCTGACGGAAAACTTGTTCCGGT 203
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 88 GGCATTGGGTTTAAGCAGTGAAGAATCGGAGATGTCACCTGACGGAGAACTTGTTCCGGT 147
Query 204 GGATTCATCGGTGGTAGTCTCGGCGAAGAGGAAGATACCTCAGTTATCGCGGAGTTGGAT 263
||||||||||| ||||||| ||||||||||||||| | |||||||||| ||||||||||
Sbjct 148 GGATTCATCGGCGGTAGTCACGGCGAAGAGGAAGACATCTCAGTTATCAAGGAGTTGGAT 207
Query 264 TTCCATAGACGCGTCAGGGCAAAAAACTGTGCTTGACGTTGACAAACACGTGATTATGCA 323
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 TTCCATAGACGCCACGGGGCAAAAAACTGTGCTTGACGTTGACAAACACGTGATTATGCA 267
Query 324 TCGTGTTCAGATCCACGCTCGTGATCTTCGGATCCTTGATCCAAATCTATTTTACCCATC 383
|||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct 268 CCGTGTTCAAATCCACGCTCGTGATCTCCGGATCCTTGACCCGAATCTATTTTACCCTTC 327
Query 384 TGCTATTCTGGGTCGAGAAAGAGCCATTGTTCTTAACTTAGAGCATATTAAGGCGATTAT 443
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 328 TGCTATTTTGGGTCGAGAAAGAGCCATTGTTCTTAACTTAGAGCATATCAAGGCGATTAT 387
Query 444 CACTGCCGAAGAGGTTTTGATTCGGGATTCTTCAGATGAAAATGTTATTCCCGTCCTGGA 503
||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||
Sbjct 388 CACTGCCGAAGAGGTTTTGATCCGAGATTCGTCAGATGAAAATGTTATCCCCGTCCTGGA 447
Query 504 GGAGTTTCAGAGAAGATTGCCTGTAGGGAACGAGGCACATGGTGGTCACGGAGATGGTGA 563
|||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct 448 GGAGTTTCAGAGAAGATTACCTGTAGGAAACGAGGCACATGGTGTTCACGGAGATGGTGA 507
Query 564 TGTGGGTGAAGAAGATGAATCCCCGTTTGAATTTCGGGCGCTAGAGGTGGCTTTAGAAGC 623
| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 508 TTTGGGTGAAGAAGATGAATCCCCGTTTGAATTCCGGGCGCTAGAGGTGGCCTTGGAAGC 567
Query 624 TATTTGTAGTTTCCTAGCTGCAAGGACAACAGAACTAGAGAAGTCTGCTTATCCTGCTTT 683
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 568 TATTTGTAGTTTTCTAGCTGCAAGGACAACAGAACTAGAGAAGTTTGCTTATCCTGCTTT 627
Query 684 GGATGAACTTACATTGAAGATAAGTAGCCGTAACTTGGAAAGGGTTCGTAAATTGAAGAG 743
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 628 GGATGAACTTACCTTGAAGATAAGTAGCCGTAACTTGGAAAGAGTTCGTAAATTGAAGAG 687
Query 744 TGCCATGACCCGATTGACAGCTCGGGTCCAAAAGGTAAGGGATGAGCTTGAACAGTTGTT 803
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 688 TGCCATGACCCGTTTGACAGCTCGGGTCCAAAAGGTAAGGGATGAGCTTGAACAGTTGTT 747
Query 804 GGATGATGACGGTGATATGGCTGATCTCTTCCTTACAAGGAAATTTGTTGGTGCATCTTC 863
||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 748 GGATGATGATGGTGATATGGCTGATCTCTACCTTACAAGGAAGCTTGTTGGTGCATCTTC 807
Query 864 ATC-GATCAGCGTTTCAGATGAACCTATTTGGTATCCTACGTCCCCAACAATAGGTTCTA 922
||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 808 ATCTG-TCAGCGTTTCAGATGAACCCATTTGGTATCCTACTTCCCCAACAATAGGTTCTA 866
Query 923 AGATTTCCAGAGCAAGTAGAGTAAGTTTAGGCACGGTTCGTGGGGACGATGAAAATGATG 982
||||||||||||||||||||| ||||||| |||||||||||| ||||| |||| |||||
Sbjct 867 TGATTTCCAGAGCAAGTAGAGTGAGTTTAGTCACGGTTCGTGGAGACGACGAAACTGATG 926
Query 983 TTGAAGAGCTTGAGATGTTGCTTGAGGCATACTTCATGCAAATCGACAGCACTTTGAACA 1042
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 927 TTGAAGAGCTTGAAATGTTGCTTGAGGCATACTTCATGCAAATAGACAGCACTTTGAACA 986
Query 1043 AATTAACCGAGCTACGCGAGTATATTGATGACACAGAGGATTACATTAACATCCAGTTAG 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 AATTAACCGAGCTACGCGAGTATATTGATGACACAGAGGATTACATTAACATCCAGTTAG 1046
Query 1103 ACAATCATCGAAATCAGCTGATTCAGTTAGAGCTAATGTTAAGCTCTGGAACCGTGTGTG 1162
|||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct 1047 ACAATCATCGAAATCAGCTGATTCAGTTAGAGCTAATGTTAAGCGCAGGAACCGTCTGTG 1106
Query 1163 TATCAATGTACTCAATGGTCGCCGGAATATTCGGCATGAACCTTCCCTACACATGGAACC 1222
||||| ||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1107 TATCAGTGTACTCTATGATCGCCGGAATATTCGGCATGAACATTCCCAACACATGGAACC 1166
Query 1223 ACGACCATGGATACATTTTCAAATGGGTGGTAAGTCTCACGGGAACATTTTGCGCAGTCT 1282
|||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1167 ACGACCATGGTTACATTTTCAAATGGGTCGTAAGTCTCACGGGAACATTTTGCATAGTCT 1226
Query 1283 TGTTCGTGATTATACTGTCGTACGCTCGGTTTAGAGGCCTCATCGGATCTTAATGACAAG 1342
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1227 TGTTCGTGATTATACTGTCGTACGCTCGGTTTAGAGGACTCATCGGATCTTAATGACAAG 1286
Query 1343 AGAAGAGAGGACAATT-GGTACAGATTT-ATAACAAAGAATGTGAGAGCAGATCTTGTTT 1400
||| | || ||||| |||||| |||| ||| || ||||||||||||||||||||||||
Sbjct 1287 AGA-G-GA---CAATTTGGTACATATTTTATAGCAGAGAATGTGAGAGCAGATCTTGTTT 1341
Query 1401 TTGGGGGGCCTCTTCTCGCCAGCAATTTCGTTACTA-GTGATGGGATTGTAT--TTTGTA 1457
|| |||| | |||||||||||||| ||||||||||| |||||||||||| || ||||||
Sbjct 1342 TTTGGGGTC-TCTTCTCGCCAGCATTTTCGTTACTAAGTGATGGGATTGCATAATTTGTA 1400
Query 1458 CTGTGTGACTACATTTT 1474
|||||||||||||||||
Sbjct 1401 CTGTGTGACTACATTTT 1417
> AT5G09720.1 | Symbols: | Magnesium transporter CorA-like family
protein | chr5:3011735-3014399 REVERSE LENGTH=1144
Length=1144
Score = 1098 bits (594), Expect = 0.0
Identities = 943/1109 (85%), Gaps = 33/1109 (3%)
Strand=Plus/Plus
Query 224 CGGCGAAGAGGAAGATACCTCAGTTATCGCGGAGTTGGATTTCCATAGACGCGTCAGGG- 282
||| |||||||| | ||| |||| |||| ||||||||||||||||||||||| | |||
Sbjct 26 CGGTGAAGAGGATTACACCCCAGTCATCGTGGAGTTGGATTTCCATAGACGCGAC-GGGA 84
Query 283 CAAAAAACTGTGCTTGACGTTGACAAACACGTGATTATGCATCGTGTTCAGATCCACGCT 342
||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct 85 AAAAAAACGGTGCTTGACGTTGACAAATATGTGATTATGCACCGTGTTCAGATCCACGCT 144
Query 343 CGTGATCTTCGGATCCTTGATCCAAATCTATTTTACCCATCTGCTATTCTGGGTCGAGAA 402
|| ||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 145 CGCGATCTCCGGATACTTGACCCAAATCTCTTTTACCCTTCTGCTATTCTGGGTCGAGAA 204
Query 403 AGAGCCATTGTTCTTAACTTAGAGCATATTAAGGCGATTATCACTGCCGAAGAGGTTTTG 462
||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct 205 AGAGCCATTGTTCTTAACTTAGAGCATATCAAGGCGATCATCACTGCCAAAGAGGTTTTG 264
Query 463 ATTCGGGATTCTTCAGATGAAAATGTTATTCCCGTCCTGGAGGAGTTTCAGAGAAGATTG 522
|||| |||||| |||||||||||| ||||||| ||||||||||||||||| | | ||
Sbjct 265 ATTCAGGATTCGTCAGATGAAAATCTTATTCCAACCCTGGAGGAGTTTCAGACACGCTTA 324
Query 523 CCTGTAGGGAACGAGGCACATGGTGGTCACGGAGATGGTGATGTGGGTGAAGAAGATGAA 582
|||| || ||| ||||||| |||||||| |||||||||||||| |||||||||||||
Sbjct 325 TCTGTTGGAAACAAGGCACACGGTGGTCAATTAGATGGTGATGTGGTTGAAGAAGATGAA 384
Query 583 TCCCCGTTTGAATTTCGGGCGCTAGAGGTGGCTTTAGAAGCTATTTGTAGTTTCCTAGCT 642
||| |||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct 385 TCCGCGTTTGAATTTCGGGCACTAGAGGTTGCTTTGGAAGCTATTTGTAGCTTCCTAGCT 444
Query 643 GCAAGGACAACAGAACTAGAGAAGTCTGCTTATCCTGCTTTGGATGAACTTACATTGAAG 702
|||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 445 GCAAGGACAATAGAATTAGAGAAGTCTGCTTATCCTGCTTTGGATGAACTTACCTTGAAG 504
Query 703 ATAAGTAGCCGTAACTTGGAAAGGGTTCGTAAATTGAAGAGTGCCATGACCCGATTGACA 762
||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct 505 TTAACTAGCCGTAACTTGCTAAGGGTTTGTAAATTGAAGAGTTCCATGACCCGATTGACA 564
Query 763 GCTCGGGTCCAAAAGGTAAGGGATGAGCTTGAACAGTTGTTGGATGATGACGGTGATATG 822
|||| |||||||||| ||| |||||||||||||||||||||||| ||||||| ||||||
Sbjct 565 GCTCAGGTCCAAAAGATAAAGGATGAGCTTGAACAGTTGTTGGAAGATGACGAAGATATG 624
Query 823 GCTGATCTCTTCCTTACAAGGAAATTTGTTGGTGCATCTTCATC-GATCAGCGTTTCAGA 881
||||| |||| |||| ||||||| | | |||||||||||| | | | | | ||| |
Sbjct 625 GCTGAACTCTACCTTTCAAGGAAGCTCGCGGGTGCATCTTCACCAGCT-ATTGATTCTGG 683
Query 882 TGAAC-C-T-ATTTGGTATCCTACGTCCCCAACAATAGGTTCTAAGATTTCCAGAGCAA- 937
||||| | | | |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 684 TGAACACATTAATTGGTATCCTACGTCCCCAACAATAGGTGCTAAGATTTCCAGAGCAAA 743
Query 938 GTAG--A---G-TAAGTTTAGGCACGGTTCGTGGGGACGATGAAAATGATGTTGAAGA-G 990
| || | | | || | || |||||||||||||||||| |||||||||||||||| |
Sbjct 744 G-AGCCATTTGGTGAGGTCAGCCACGGTTCGTGGGGACGACAAAAATGATGTTGAAGAAG 802
Query 991 CTTGAGATGTTGCTTGAGGCATACTTC-ATGCAAATCGACAGCACTTTGAACAAATTAAC 1049
|||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||
Sbjct 803 -TTGAAATGTTGCTTGAGGCACACTTTTATGCAAATCGACAGAACTTTGAACAAATTAAC 861
Query 1050 CGAGCTACGCGAGTATATTGATGACACAGAGGATTACATTAACATCCAGTTAGACAATCA 1109
|||||||||||||||| | ||||| ||||| |||| | |||| |||||| |||||| | |
Sbjct 862 CGAGCTACGCGAGTATGTGGATGAGACAGAAGATTTCCTTAATATCCAGCTAGACAGT-A 920
Query 1110 -TCGAAATCAGCTGATTCAGTTAGAGCTAATGTTAAGCTCTGGAACCGTGTGTGTATCAA 1168
|||||||||||| ||| |||| || | || |||| | |||||| | | |||||||||
Sbjct 921 GTCGAAATCAGCTAATTAAGTTCGAAATTATTTTAACCGCTGGAAGCATCTGTGTATCAG 980
Query 1169 TGTACTCAATGGTCGCCGGAATAT-TCGGCATGAACCTTCCCTACACATGGAACCA-CGA 1226
||||||| | || | || || | | ||||||||| |||| | | | |||||| | | |
Sbjct 981 TGTACTCTGTAGTTGTTGGCAT-TCTAGGCATGAACATTCCTTTCCCGTGGAAC-ATCAA 1038
Query 1227 CCATGGATACAT-T-TTCAAATGGGTGGTAAGTCT-CACGGGAACATTTTGCGCAGTCTT 1283
| | |||| | |||||||||||||| || | ||| | |||| |||||||| ||||
Sbjct 1039 A-A---A-ACATATGTTCAAATGGGTGGTGAG-CGGCACTGCAACAGTTTGCGCAATCTT 1092
Query 1284 GTTCGTGATTATACTGTCGTACGCTCGGT 1312
||||||||||||| |||||| ||||||||
Sbjct 1093 GTTCGTGATTATAATGTCGTTCGCTCGGT 1121
> AT4G28580.1 | Symbols: ATMGT5, MGT5, MRS2-6 | magnesium transport
5 | chr4:14123489-14125052 FORWARD LENGTH=1276
Length=1276
Score = 58.4 bits (31), Expect = 2e-07
Identities = 52/62 (84%), Gaps = 1/62 (2%)
Strand=Plus/Plus
Query 963 TGGGGAC-GATGAAAATGATGTTGAAGAGCTTGAGATGTTGCTTGAGGCATACTTCATGC 1021
||| ||| || ||| |||| |||| || | ||||||||||||||||||||||||||||
Sbjct 860 TGGTGACGGAGGAAGATGACATTGATGATATGGAGATGTTGCTTGAGGCATACTTCATGC 919
Query 1022 AA 1023
||
Sbjct 920 AA 921
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72690389160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5