BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487795 Length=653 Score E Sequences producing significant alignments: (Bits) Value AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH) DNA... 981 0.0 > AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:3026401-3027075 REVERSE LENGTH=675 Length=675 Score = 981 bits (531), Expect = 0.0 Identities = 601/634 (95%), Gaps = 8/634 (1%) Strand=Plus/Plus Query 1 ATGAATAATAATAATATGAACCCATCTCTCTTCCAAAATTACACTTGGAACAACATCATC 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAATAATTATAATATGAACCCATCTCTCTTCCAAAATTACACTTGGAACAACATCATC 60 Query 61 AACAGCAG---CAACAACAACAAGAATGATG---ATCATCATCAACATAATAATGATCCA 114 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 61 AACAGCAGCAACAACAACAACAAGAATGATGATCATCATCATCAACATAATAATGATCCA 120 Query 115 ATCGGTATGGCCATGGACCAGTACACACAGCTCCATAtcttcaatcctttctcttcttct 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATCGGTATGGCCATGGACCAGTACACACAGCTCCATATCTTCAATCCTTTCTCTTCTTCT 180 Query 175 catttccctcctctctcttcttccctcagtaccaccactcttttctccGGAGATCAAGAA 234 |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 181 CATTTCCCTCCTCTCTCTTCTTCCCTCACAACCACCACTCTTCTCTCCGGAGATCAAGAA 240 Query 235 GAGGACGAAGACGAAGAAGAACCTCTTGAGGAACTCGGTGCTATGAAGGAAATGATGTAC 294 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 241 GACGACGAAGACGAAGAAGAACCTCTAGAGGAACTCGGTGCTATGAAGGAAATGATGTAC 300 Query 295 AAGATCGCAGCCATGCAGTCGGTTGACATCGACCCGGCAACCGTCAAGAAACCCAAACGC 354 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 301 AAGATCGCAGCCATGCAATCGGTTGACATCGACCCAGCAACCGTCAAGAAACCCAAACGC 360 Query 355 CGTAACGTAAGGATCTCCGACGACCCTCAGAGTGTGGCGGCTAGACATCGCCGTGAGAGA 414 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGTAACGTGAGGATCTCCGACGACCCTCAGAGTGTGGCGGCTAGACATCGCCGTGAGAGA 420 Query 415 ATCAGTGAGAGAATCAGAATCCTCCAGAGACTCGTGCCAGGTGGCACTAAAATGGACACA 474 ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| || Sbjct 421 ATCAGTGAGAGGATCAGAATTCTTCAGAGACTCGTGCCAGGTGGCACTAAAATGGATACG 480 Query 475 GCTTCAATGCTCGATGAAGCTATACGCTATGTCAAGTTCTTGAAACGGCAGATCCGCCTA 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 481 GCTTCAATGCTCGATGAAGCTATACGCTATGTCAAGTTCTTGAAACGGCAGATCCGGCTA 540 Query 535 CTCAATAATAAT-CCGGGAAATCCTTCTCCTCCGCCGCAAGATCAAGCTTCTCAGGCGTT 593 |||||||||||| |||| | || || |||| ||||||||||||||||||||||||||| | Sbjct 541 CTCAATAATAATACCGG-ATATACTCCTCCGCCGCCGCAAGATCAAGCTTCTCAGGCGGT 599 Query 594 AACGACGTCATGGATTTCGCCACCACCACCACCA 627 |||||||||||| |||| || |||||||| ||| Sbjct 600 GACGACGTCATGGGTTTCACCGCCACCACCGCCA 633 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31547044316 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5