BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487822 Length=378 Score E Sequences producing significant alignments: (Bits) Value AT5G09990.1 | Symbols: PROPEP5 | elicitor peptide 5 precursor |... 518 2e-146 > AT5G09990.1 | Symbols: PROPEP5 | elicitor peptide 5 precursor | chr5:3124568-3125076 FORWARD LENGTH=416 Length=416 Score = 518 bits (280), Expect = 2e-146 Identities = 341/370 (92%), Gaps = 5/370 (1%) Strand=Plus/Plus Query 13 GAGGAGA-TTATAAGATAGAGATGATGCAGCAAGAGGGAGATAACAAAAGAGATTGTTGC 71 ||||| | ||| ||||||| || ||||||||||||| ||||| ||||||||||||||||| Sbjct 33 GAGGA-ACTTAGAAGATAGCGAAGATGCAGCAAGAGAGAGATCACAAAAGAGATTGTTGC 91 Query 72 AAGCTCATGCCTCAAACGGTCAAGGGTTTTTTCAAGTGTCTGAGATTCAGACG---TTCA 128 ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||| Sbjct 92 AAGCTCATGCCTCAAACTGTCAAGGCTTTCTTCAAGTGTCTGAGATTCAGACGTTCTTCT 151 Query 129 TCTTCTTCTTCAGACATGGTGAAATCTAAAGCAAGAAATGAGGAGAAAGAAGAAGCTTCA 188 |||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||| Sbjct 152 TCTTCTTCTTCAGACATGGTGAAAGCTAGAGCAAGAAATGAAGAGAAAGAAGAACCTTCA 211 Query 189 TCTATCGAAACTTCAACGAGGAGTCTCAACGTAATGAGGAAAGGGATAAGGAAACAACCG 248 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 212 TCTATCGAAACTTCAACTAGGAGTCTCAACGTAATGAGGAAAGGGATAAGGAAACAACCA 271 Query 249 GTTAGCTCGGGAAAACGAGGTGGAGTTAACGACTACGACATGTAACTAGAATCTTGATGT 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 272 GTTAGCTCGGGAAAACGAGGTGGAGTTAACGACTACGACATGTAACTAGAATCTTGATGT 331 Query 309 AGAATTGGATAATCTTGTTTAGTAGTCACTCTAAAAGAAACTTGCTTTGCGCCTCATGAA 368 |||||||||||||||||||| ||||| |||||| || | |||| |||||| |||||||| Sbjct 332 AGAATTGGATAATCTTGTTTGGTAGTTACTCTACAACATACTTTCTTTGCATCTCATGAA 391 Query 369 TCATCACGAT 378 |||||| ||| Sbjct 392 TCATCATGAT 401 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17794783146 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5