BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487830
Length=920
Score E
Sequences producing significant alignments: (Bits) Value
AT5G10050.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1483 0.0
AT5G65205.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 538 4e-152
> AT5G10050.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:3144200-3145730 FORWARD LENGTH=981
Length=981
Score = 1483 bits (803), Expect = 0.0
Identities = 882/921 (96%), Gaps = 2/921 (0%)
Strand=Plus/Plus
Query 1 AAAATGGAGAGCGACGACGAGAGTCCGGTGGTTCTAATTACGGGGTGTTCTCAGGGAGGG 60
||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 52 AAAATGGAGAGTGGCGATGAGAGTCCGGTGGTTCTAATTACGGGATGTTCTCAGGGAGGA 111
Query 61 ATTGGTCACGCGCTGGCACGTGAGTTCACTGAGAAGGGATGCCGAGTGGTGGCGACGAGT 120
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 112 ATTGGTCACGCGCTGGCCCGTGAGTTCACTGAGAAGGGATGTCGAGTGGTGGCGACGAGT 171
Query 121 CGATCACGGAGCACCATGACGGATCTGGAGCAAGATTCGAGGTTATTCGTGAAGGAGCTT 180
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 CGATCACGGAGTACGATGACGGATCTGGAGCAAGATTCGAGGTTATTCGTGAAGGAGCTT 231
Query 181 GATGTGCAATCGGACCAGAATGTGAGTAAGGTTTTGTCGGAGGTTATTGATAAGTTCGGT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 GATGTGCAATCGGACCAGAATGTGAGTAAGGTTTTGTCGGAGGTTATTGATAAGTTCGGT 291
Query 241 AGGATCGACGTTCTTGTCAACAACGCCGGAGTTCAGTGTGTCGGACCACTGGCGGAGACT 300
| ||||||||||||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct 292 AAGATCGACGTTCTTGTTAATAACGCCGGAGTTCAGTGCGTTGGACCTCTGGCGGAGACT 351
Query 301 CCAATTTCCGCCATGGAAAACACATTCAACACCAATGTTTTTGGTTCCATGAGGATGACT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 CCAATTTCCGCCATGGAAAACACATTCAACACCAATGTTTTTGGTTCCATGAGGATGACT 411
Query 361 CAAGCTGTTGTACCTCACATGGTGTCTaaaaaaaaGGGAAAGATTGTCAACGTTGGAAGT 420
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 412 CAAGCTGTTGTACCACACATGGTGTCTAAGAAAAAGGGAAAGATTGTCAACGTTGGAAGT 471
Query 421 ATCACTGTTATGGCACCTGGTCCATGGGCTGGGGTCTATACAGCTACCAAAGCTGCTATT 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 472 ATCACTGTTATGGCACCTGGTCCATGGGCTGGTGTCTATACAGCTACCAAAGCTGCTATT 531
Query 481 CATGCTCTTACCGATACCCTGAGGTTGGAGCTTCTGCCC-TTTGGGATTGATGTCATCAA 539
||||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||
Sbjct 532 CATGCTCTTACCGATACTCTGAGGTTGGAGCTTC-GTCCGTTTGGGATTGATGTCATCAA 590
Query 540 CGTTGTCCCGGGAGGAATAAGAACAAACATAGCGAACTCAGCTGTGGCAACCTTCAACAA 599
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 591 TGTTGTCCCGGGAGGAATAAGAACAAACATAGCAAACTCAGCTGTGGCAACTTTCAACAA 650
Query 600 AATGCCTGAGCTGAAACTATACAAGCCTTATGAAGAAGCTATCAGAGAAAGGGCGTTTAT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 AATGCCTGAGCTGAAACTATACAAGCCTTATGAAGAAGCTATCAGAGAAAGGGCGTTTAT 710
Query 660 ATCACAGAGGATGAAGCCAACTCCTGCAGAAACATTCGCCAAAGACACCGTAGCTGCAGT 719
||||||||||||||| |||||||||||||||||||| |||| |||||| ||||| |||||
Sbjct 711 ATCACAGAGGATGAATCCAACTCCTGCAGAAACATTTGCCAGAGACACTGTAGCCGCAGT 770
Query 720 GCTGAAGAAGAACCCACCCGCTTGGTTCTCTTCAGGCAGGTATTCAACCCTCATGGCAGT 779
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 771 GCTGAAGAAGAATCCACCCGCTTGGTTCTCGTCAGGCAGGTATTCAACCCTCATGGCAGT 830
Query 780 CATGTACCATATGCCCCTATGGCTCAAAGATTTTCTCCAGAAGCAGGTTTTAATGAAGAA 839
|||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 831 CATGTATCATATGCCCTTATGGCTCAAAGATTTTTTCCAGAAGCAGGTTTTAATGAAGAA 890
Query 840 GTGATAATCAGGTTGGGGTTTAAGACAGAATGTAACATAAACACGAATGTAAAAGATTTG 899
|||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct 891 GTGATAATCAGGTTGGGGTTTAAGACAGAATGTACCTTAAACACGAATGTAAAAGCTTTG 950
Query 900 TTCAAATTGTTAATTAAATCT 920
||||||||||||||| |||||
Sbjct 951 TTCAAATTGTTAATTGAATCT 971
> AT5G65205.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:26050810-26052034 REVERSE LENGTH=991
Length=991
Score = 538 bits (291), Expect = 4e-152
Identities = 643/810 (79%), Gaps = 35/810 (4%)
Strand=Plus/Plus
Query 1 AAAAT-GG-AG-AGCGA-CGACGAGA-GTCCGGTGGTTCTAATTACGGGGTGTTCTCAGG 55
||||| || || ||| | |||||||| | || |||||||| || || || ||||||||||
Sbjct 15 AAAATGGGAAGCAGC-AGCGACGAGACG-CCAGTGGTTCTCATCACAGGATGTTCTCAGG 72
Query 56 GAGGGATTGGTCACGCGCTGGCACGTGAGTTCACTGAGAAGGGATGCCGAGTGGTGGCGA 115
|||| || ||||||||| |||| ||||||||| | | || || || || ||||||||||
Sbjct 73 GAGGAATCGGTCACGCGTTGGCGCGTGAGTTCTCGGCTAATGGTTGTCGTGTGGTGGCGA 132
Query 116 CGAGTCGATCAC-GGAGCACCATGAC-GGATCTGGAGCAAGATTCGAGGTTATTCGTG-A 172
|||||||||| | | || || ||||| | || ||||| ||||||| | ||| || ||| |
Sbjct 133 CGAGTCGATCGCAGAAG-ACGATGACTGAAT-TGGAGAAAGATTCCAAGTTCTTTGTGCA 190
Query 173 AGGAGCTTGATGTGCAATCGGACCAGAATGTGAGTAAGGTTTTGTCGGAGGTTATTGATA 232
| ||||| ||||| || || || |||| |||||||| ||| ||||| | ||||| || |
Sbjct 191 A-GAGCTCGATGTTCAGTCTGAGCAGAGCGTGAGTAAAGTTGTGTCGAAAGTTATCGACA 249
Query 233 AGTTCGGT-AGGATCGACGTTCTT-GTCAACAACGCCGGAGTTCAGTGTGTCGGACCACT 290
| || ||| | ||| || ||| || || || |||||||||||||||||| ||||||| |
Sbjct 250 AATTTGGTCA-GATTGATGTT-TTGGTTAATAACGCCGGAGTTCAGTGTATCGGACCTTT 307
Query 291 GGCGGAGACTCCAATTTCCGCCATGGAAAACACATTCAACACCAATGTTTTTGGTTCCAT 350
|||||||| ||||||||| |||||||| |||| |||||||||||||| | ||||||||
Sbjct 308 GGCGGAGATTCCAATTTCAGCCATGGATTACACCTTCAACACCAATGTGCTCGGTTCCAT 367
Query 351 GAGGATGACTCAAGCTGTTGTACCTCACATGGTGTCTaaaaaaaaGGGAAAGATTGTCAA 410
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||
Sbjct 368 GAGGATGACTCAAGCTGTTGTACCTCACATGGCGTCTAAGAAAAAGGGAAAGATTGTGAA 427
Query 411 CGTTGGAAGTATCA-CTGTTATGGCACCTGGTCCATGGGCTGGGGTCTATACAGCTACCA 469
| | |||||||| | | | |||||||| || |||||||||||||| ||||| || | ||
Sbjct 428 CATAGGAAGTATTAGCA-TAATGGCACCAGGACCATGGGCTGGGGTTTATACTGC-ATCA 485
Query 470 AA-GCTGCTATTCATGCTCTTACCGATACCCTGAGGTTGGAGCTTCTGCCCTTTGGGATT 528
|| |||||| |||||||||||||||| || | |||||||||||| ||| |||||||||
Sbjct 486 AAAGCTGCTCTTCATGCTCTTACCGACACTTTAAGGTTGGAGCTTAAGCCATTTGGGATT 545
Query 529 GATGTCATCAACGTTGTCCCGGGAGGAATAAGAA-CAAACATAGCGAACTCAGCTG-TGG 586
||||| |||||| |||| || ||||| || || |||||||||| ||||||| | |
Sbjct 546 GATGTAATCAACATTGTACCAGGAGGTATTC-AATCAAACATAGCTAACTCAGG-GATAT 603
Query 587 CAACCTTCAACAAAATGCCTGAGCTGAAACTATACAAGCC-TTATGAAGAAGCTATCAGA 645
| | |||||||| | ||||| ||||||||||||| || || || || |||||| |
Sbjct 604 CGAGTTTCAACAATTTACCTGAATTGAAACTATACAAACCGTTC-GAGGACGCTATCCGT 662
Query 646 GAAAGGGCGTTTATATCACAGAGGATGAAGCC-A-ACTCCTGCAGAAACATTCGCCAAAG 703
|| || |||||| | || || | || ||||| | || || |||| || || || ||||
Sbjct 663 GAGAGAGCGTTTCTGTCGCAAAACATAAAGCCGATAC-CCA-CAGAGACTTTTGCGAAAG 720
Query 704 ACACCGTAGCTGCAGTGCTGAAGAAGAACCCACCCGCTTGGTTCTCTTCAGGCAGGT-AT 762
| || || | | ||||||||||| |||||||| ||||||| |||| |||| |||| ||
Sbjct 721 AGACTGTTTCCGTGGTGCTGAAGAAAAACCCACCGGCTTGGTACTCTACAGGTAGGTTAT 780
Query 763 TCAACCCTCATGGC-AGTCATGTACCATAT 791
| || ||||||| | ||||| |||||||
Sbjct 781 -CTACAGTCATGGCGA-TCATGCACCATAT 808
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44959561565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5