BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487844
Length=1818
Score E
Sequences producing significant alignments: (Bits) Value
AT5G10170.1 | Symbols: ATMIPS3, MIPS3 | myo-inositol-1-phosphat... 2854 0.0
AT4G39800.1 | Symbols: MI-1-P SYNTHASE, MIPS1, ATMIPS1, ATIPS1 ... 1184 0.0
> AT5G10170.1 | Symbols: ATMIPS3, MIPS3 | myo-inositol-1-phosphate
synthase 3 | chr5:3187277-3190251 REVERSE LENGTH=1884
Length=1884
Score = 2854 bits (1545), Expect = 0.0
Identities = 1723/1806 (95%), Gaps = 24/1806 (1%)
Strand=Plus/Plus
Query 18 CCTCTCTCTCTCAAGCATCAATTATTTCTCAAAGTTTTCCTTAGGCAAAAATGTTCATCG 77
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 41 CCTCTCTCTCTCAAGCATCAATTAATTCTCAAAGTCTTCCTTAGGCAAAAATGTTCATCG 100
Query 78 AAAGCTTCAAGGTTGAATCTCCGAACGTGAAGTACACCGAGAATGAGATCCATTCAGTGT 137
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 101 AAAGCTTCAAGGTTGAATCTCCGAACGTGAAGTACACCGAGAATGAGATCCACTCAGTGT 160
Query 138 ACGACTACCAAACCACTGAGCTTGTTCATGAGAACAAAAACGGTGCGTTTCAATGGACTG 197
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 161 ACGACTACCAAACCACTGAGCTTGTTCATGAGAACAAAAACGGTGCTTTTCAATGGACTG 220
Query 198 TGAAGCCAAAAACCGTGAAATATGAGTTTAAGACCGACACTCATGTTCCAAAACTTGGAG 257
|||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 221 TGAAGCCAAAGACTGTGAAGTATGAGTTTAAGACCGACACTCATGTTCCCAAACTTGGAG 280
Query 258 TAATGCTCGTTGGTTGGGGAGGCAACAATGGTTCTACGCTTACCGCTGGTGTTATCGCCA 317
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 281 TAATGCTCGTTGGTTGGGGAGGCAACAATGGTTCTACACTTACCGCTGGTGTTATCGCCA 340
Query 318 ATCGTGAGGGAATATCTTGGGCTACGAAGGAGAAAGTGCAGCAAGCTAATTATTTCGGGT 377
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 341 ATCGTGAGGGAATATCTTGGGCTACAAAGGAGAAAGTGCAACAAGCTAATTATTTCGGGT 400
Query 378 CATTAACCCAAGCATCCTCTATTCGGGTCGGGTCTTTTAATGGTGAAGAAATCTATGCTC 437
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 401 CATTAACCCAAGCATCTTCTATTCGGGTCGGGTCATTTAATGGTGAAGAAATCTATGCTC 460
Query 438 CTTTCAAAAGTCTTCTCCCCATGGTGAATCCTGAAGAAATTGTGTTTGGAGGATGGGACA 497
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 461 CTTTCAAAAGTCTTCTCCCCATGGTGAATCCGGAAGAAATTGTGTTTGGAGGATGGGACA 520
Query 498 TAAGTGACATGAACTTAGCAGACGCAATGGCACGAGCCAAGGTCCTAGACATCGACCTTC 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 521 TAAGTGACATGAACTTAGCAGACGCAATGGCACGAGCCAAGGTCCTAGACATCGACCTTC 580
Query 558 AAAAGCAGCTGCGTCCGTTCATGGAGCACATGGTCCCACTCCCTGGAATATTCGACCCAG 617
|||||||| |||||||||||||||| |||||||| |||||||| ||||| ||||||||||
Sbjct 581 AAAAGCAGATGCGTCCGTTCATGGAACACATGGTTCCACTCCCCGGAATCTTCGACCCAG 640
Query 618 ATTTCATCGCAGCTAACCAGGGGTCGCGTGCCAACCACGTGATCAAAGGCACCAAGAAAC 677
||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 641 ATTTCATCGCAGCTAACCAAGGGTCACGTGCTAACCACGTGATCAAAGGCACCAAGAAAC 700
Query 678 AACAACTCGAGCAAGTCATCAAGGACATCAGGGAGTTCAAAGAGAAAAACAAAGTGGATA 737
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AACAACTCGAACAAGTCATCAAGGACATCAGGGAGTTCAAAGAGAAAAACAAAGTGGATA 760
Query 738 AAGTGGTGGTACTGTGGACGGCGAACACAGAAAGATACAGCAATGTGGTGGTTGGTCTTA 797
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 761 AAGTGGTGGTACTGTGGACGGCAAACACAGAAAGATACAGCAATGTGGTGGTTGGTCTTA 820
Query 798 ACGACACGACGGAGAATCTAATGTCATCTTTGGAAAAGGATGAGGCTGAGATTTCTCCTT 857
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 821 ACGACACGACGGAGAATCTCATGTCATCTTTGGACAAGGATGAGGCTGAGATTTCTCCTT 880
Query 858 CTACACTTTACGCCATTGCTTGTGTTCTTGAGAACGTTCCTTTCATCAATGGAAGTCCAC 917
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 881 CTACACTTTACGCCATTGCTTGTGTTCTTGAGAACGTTCCTTTTATCAATGGAAGTCCAC 940
Query 918 AAAACACTTTTGTCCCTGGGCTTATTGAATTGGCCATTGAGAGAAACTGCTTGATCGGTG 977
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 941 AAAACACTTTTGTCCCTGGGCTTATTGAATTAGCCATAAAGAGAAACTGCTTGATCGGTG 1000
Query 978 GTGATGACTTCAAGAGTGGTCAGACCAAGATGAAGTCTGTCCTCGTCGATTTCCTTGTTG 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 GTGATGACTTCAAGAGTGGTCAGACCAAGATGAAGTCTGTCCTCGTCGATTTCCTTGTTG 1060
Query 1038 GTGCCGGAATCAAACCGACGTCGATTGTGAGTTACAACCACCTTGGGAACAACGACGGCA 1097
| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1061 GCGCCGGAATCAAACCGACGTCGATTGTCAGTTACAACCATCTTGGGAACAACGACGGCA 1120
Query 1098 TGAACTTGTCAGCGCCGCAAACATTCCGGTCAAAGGAGATATCGAAGAGCAATGTCGTGG 1157
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 TGAACTTGTCAGCACCTCAAACATTCCGGTCAAAGGAGATATCGAAGAGCAATGTCGTGG 1180
Query 1158 ACGATATGGTTGGTAGCAACGGGATTTTGTACGAGCCTGGTGAACACCCTGACCACGTTG 1217
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1181 ACGATATGGTTGGTAGCAACGGAATTTTGTACGAGCCTGGTGAACACCCTGACCACGTTG 1240
Query 1218 TGGTCATTAAGTATGTGCCATATGTAGGAGATAGCAAGAGAGCAATGGACGAGTACACAT 1277
||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||
Sbjct 1241 TGGTCATTAAGTATGTGCCATGTGTAGGAGACAGCAAGAGAGCAATGGATGAATACACAT 1300
Query 1278 CAGAGATATTCATGGGAGGGAAGAACACGATTGTGATGCACAACACTTGTGAAGACTCTC 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 CAGAGATATTCATGGGAGGGAAGAACACGATTGTGATGCACAACACTTGTGAAGACTCTC 1360
Query 1338 TCTTGGCTGCTCCAATTATTTTGGACCTTGTTCTTCTTGCTGAGCTCACTACTCGGATCC 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 TCTTGGCTGCTCCAATTATTTTGGACCTTGTTCTTCTTGCTGAGCTCACTACTCGGATCC 1420
Query 1398 AGTTCATG-GCCGAAACCGAGGGAAAGTTCCATTCTTTCCATCCGGTGGCTCCTCTCCTA 1456
|||||||| | |||| |||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1421 AGTTCATGAGT-GAAAACGAGGGAAAGTTTCATTCTTTCCATCCGGTGGCTACTCTCCTA 1479
Query 1457 AGTTACCTCTCAAAGGCACCACTGGTCCCTCCTGGCACGCCAGTTGTGAATGCTTTGTCG 1516
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1480 AGTTACCTCTCAAAGGCACCACTGGTTCCTCCTGGCACGCCAGTTGTTAATGCTTTGTCG 1539
Query 1517 AAACAGCGTGCAATGCTTGAGAACATACTCAGAGCTTGTGTTGGACTTGCTCCTGAGAAC 1576
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1540 AAACAGCGTGCAATGCTTGAGAACGTACTCAGAGCTTGTGTTGGACTTGCTCCTGAGAAC 1599
Query 1577 AACATGATTCTCGAGTACAAGTGATCAAAGAGACGAGACCAATCAATCGATCAAGACTCG 1636
|||||||||||||||||||||||||||||||||| | ||| || | | ||| |
Sbjct 1600 AACATGATTCTCGAGTACAAGTGATCAAAGAGAC----C-AAT---TC-A--A-GACCCC 1647
Query 1637 CTTTCTTAGCT-T-TTCGCtttttatgtttatttaataattacatttctaaaatgtaagt 1694
||||||||||| | || ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct 1648 CTTTCTTAGCTATGTT-GCTTTCTATGTTTAATAAATAATTACATTTCTAAAATGTAAGT 1706
Query 1695 gttccttttcttattt-tttctttCTCATTTACAAATGTCATCTATCTGGTTTCGTTACC 1753
|||| ||||||| | | ||||| |||||||||||||||||||||| ||||||||||| |
Sbjct 1707 GTTC-TTTTCTT-TGTCTTTCT--CTCATTTACAAATGTCATCTATGTGGTTTCGTTATC 1762
Query 1754 TTTTCCAGCCAAATATGTAATGGTGTCTCGCGCTGAATTGGAATTGTCTT-CTATCTCAT 1812
|| |||||||||||||||||||| |||||||||||||||| |||||||| | |||||||
Sbjct 1763 TTCCCCAGCCAAATATGTAATGGTATCTCGCGCTGAATTGGGATTGTCTTTC-ATCTCAT 1821
Query 1813 TTCAAA 1818
||||||
Sbjct 1822 TTCAAA 1827
> AT4G39800.1 | Symbols: MI-1-P SYNTHASE, MIPS1, ATMIPS1, ATIPS1
| myo-inositol-1-phosphate synthase 1 | chr4:18469348-18471967
REVERSE LENGTH=1921
Length=1921
Score = 1184 bits (641), Expect = 0.0
Identities = 1275/1578 (81%), Gaps = 56/1578 (4%)
Strand=Plus/Plus
Query 52 TTTTCCTTAGGCAAAAATGTTCATCGAAAGCTTCAAGGTTGA-ATCTCCGAACGTGAAGT 110
|||||| | ||||||||||| || || |||||||| ||||| | | |||||||||||||
Sbjct 60 TTTTCC-TCTGCAAAAATGTTTATTGAGAGCTTCAAAGTTGAGAGC-CCGAACGTGAAGT 117
Query 111 ACACCGAGAATGAGATCCATTCAGTGTACGACTACCAAACCACTGAGCTTGTTCATGAG- 169
|||| ||||||||||| || || |||||||| ||| | || || ||| |||||||||||
Sbjct 118 ACACAGAGAATGAGATTCACTCTGTGTACGATTACGAGACGACGGAGGTTGTTCATGAGA 177
Query 170 A-A-CAAAAACGGTGCGTT-TCAATGGACTGTGAAGCCAAAAACCGTGAAATATGAGTTT 226
| | | || || | || ||||||| |||||||||||| || || ||||| || |||
Sbjct 178 AGACCGTCAATGGCAC-TTACCAATGGATTGTGAAGCCAAAGACTGTCAAATACGA-TTT 235
Query 227 -AAGACCGACACTCATGTTCCAAAACTT-GGAGTAATGCTCGTTGGTTGGGGAGGCAACA 284
|| ||||| | || ||| || ||| || || || ||||| || |||| |||||| ||||
Sbjct 236 CAAAACCGATATTCGTGTCCCCAAA-TTAGGGGTTATGCTTGTGGGTTTGGGAGGAAACA 294
Query 285 ATGGTTCTACGCTTACCGCTGGTGTTATCGCCAATC-GTGAGGGAATATCTTGGGCTACG 343
|||| || || || ||||||||||| || || || | || ||||| || ||||| |||
Sbjct 295 ATGGATCAACTCTCACCGCTGGTGTGATTGCGAA-CAAAGAAGGAATCTCGTGGGCAACG 353
Query 344 AAGGAGAAAGTGCAGCAAGCTAATTATTTCGGGTCATTAACCCAAGCATCCTCTATTCGG 403
||||| |||||||| ||||| ||||| ||||||||| |||| ||||| || || |||||
Sbjct 354 AAGGACAAAGTGCAACAAGCGAATTACTTCGGGTCACTAACTCAAGCTTCATCGATTCGT 413
Query 404 GTCGGGTCTTTTAATGGTGAAGAAATCTATGCTCCTTTCAAAAGTCTTCTCCCCATGGTG 463
||||| |||||||| |||||||| ||||||||||||||||| ||||| || || ||||||
Sbjct 414 GTCGGATCTTTTAACGGTGAAGAGATCTATGCTCCTTTCAAGAGTCTCCTTCCAATGGTG 473
Query 464 AATCCTGAAGAAATTGTGTTTGGAGGATGGGACATAAGTGACATGAACTTAGCAGACGCA 523
||||| || || ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 474 AATCCGGATGATGTTGTGTTTGGAGGATGGGATATAAGTGACATGAACTTAGCAGATGCC 533
Query 524 ATGGC-ACGAGCCAAGGTCCTAGACATCGACCTT-CA-AAAGCAGCTGC-GTCCGTT-CA 578
||||| | |||||| ||| || || ||||| ||| || ||| ||||| | | || || ||
Sbjct 534 ATGGCTA-GAGCCAGGGTTCTTGATATCGA-CTTGCAGAAA-CAGCT-CAGGCC-TTACA 588
Query 579 TGGAGCACATGGTCCCACTCCCTGGAATATTCGACCCAGATTTCATCGCAGCTAACCAGG 638
||||| |||| || ||||||||||| || ||||| || |||||||| || ||||| || |
Sbjct 589 TGGAGAACATTGTGCCACTCCCTGGGATCTTCGATCCTGATTTCATAGCTGCTAATCAAG 648
Query 639 GGTCGCGTGCCAACCACGTGATCAAAGGCACCAAGAAACAACAACTCGAGCA-AGTCATC 697
|||| ||||| ||||||||||||||||| |||||||| ||||| |||| || | |||||
Sbjct 649 GGTCACGTGCTAACCACGTGATCAAAGGTACCAAGAAGGAACAAGTCGACCACA-TCATC 707
Query 698 AAGGACATCAGGGAGTTCAAAGAGAAAAACAAAGTGGATAAAGTGGTGGTACTGTGGACG 757
|||||||| |||||||| || ||||| || || |||||||| || ||||| || ||||||
Sbjct 708 AAGGACATGAGGGAGTTTAAGGAGAAGAATAAGGTGGATAAGGTTGTGGTTCTCTGGACG 767
Query 758 GCGAACACAGAAAGATACAGCAATGTGGTGGTTGGTCTTAACGACACGACGGAGAATCTA 817
|| |||||||| | || ||||||||||| ||||| | ||||| || | |||||||||
Sbjct 768 GCTAACACAGAGCGTTATAGCAATGTGGTCGTTGGGATGAACGATACAATGGAGAATCTC 827
Query 818 ATGTCA-TCTTTGGAAAAGGATGAGGCTGAGATTTCTCCTTCTACACTTTACGCCATTGC 876
||| | ||| |||| | ||||||||||||||| |||||||| |||||||| || |||||
Sbjct 828 ATG-GAGTCTGTGGATAGGGATGAGGCTGAGATCTCTCCTTCAACACTTTATGCGATTGC 886
Query 877 TTGTGTTCTTGA--GAACGTTCCTTTCATCAATGGAAGTCCACAAAACACTTTTGTCCCT 934
|||||||||||| ||| | || |||||||||||||| || |||||||| ||||| ||
Sbjct 887 TTGTGTTCTTGAGGGAA--TCCCGTTCATCAATGGAAGCCCTCAAAACACCTTTGTTCCA 944
Query 935 GGGCTTATTGAAT-TGGCCATTGAGAGAA-ACTG-CTTGATCGGTGGTGATGACTTCAAG 991
|| || |||| || |||| | | || ||| | || ||||||||||| ||||| ||||||
Sbjct 945 GGTCTAATTG-ATATGGCGA-TCAG-GAACAATGTTTTGATCGGTGGAGATGATTTCAAG 1001
Query 992 AGTGGTCAGACCAAGATGAAGTCTGTCCTCGTCGATTTCCTTGTTGGTGCCGGAATCAAA 1051
|||||||| ||||||||||| |||||| | || |||||||| ||||| || ||||||||
Sbjct 1002 AGTGGTCAAACCAAGATGAAATCTGTCTTGGTTGATTTCCTAGTTGGCGCAGGAATCAAG 1061
Query 1052 CCGACGTCGATTGTGAGTTACAACCACCTTGGG-AACAACGACGGCATGAACT-TGTCAG 1109
|| || || |||||||| ||||| || |||||| |||||||| || ||||| | | ||||
Sbjct 1062 CCTACTTCAATTGTGAGCTACAATCA-CTTGGGAAACAACGATGGAATGAA-TCTCTCAG 1119
Query 1110 CGCCGCAAACATTCCGGTCAAAGGAGATATCGAAGAGCAATGTCGTGGACGATATGGTTG 1169
| || || || ||| | || |||||||| || || |||||||||||||||||||||||||
Sbjct 1120 CTCCACAGACTTTCAGATCTAAGGAGATCTCCAAAAGCAATGTCGTGGACGATATGGTTG 1179
Query 1170 GTAGCAACGGGATTTTGTACGAGCCTGGTGAACACCCTGACCACGTTGTGGTCATTAAGT 1229
|||||| || || | | |||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct 1180 CTAGCAATGGTATCCTCTTTGAGCCTGGGGAACACCCGGACCATGTTGTTGTCATCAAGT 1239
Query 1230 ATGTGCCATATGTAG-GAGATAGCAAGAGAGCAATGGACGAGTACACATCAGAGATATTC 1288
|||| || ||||| | | ||||| ||| |||| |||||||||||||||||||||||||||
Sbjct 1240 ATGTACCGTATGTTGCG-GATAGTAAGCGAGCCATGGACGAGTACACATCAGAGATATTC 1298
Query 1289 ATGGGAGGGAAGAACACGATTGTGATGCACAACACTTGTGAAGACTCTCTCTTGGCTGCT 1348
||||||||||||||||| |||||||||||||| || || || ||||||||||| ||||||
Sbjct 1299 ATGGGAGGGAAGAACACAATTGTGATGCACAATACCTGCGAGGACTCTCTCTTAGCTGCT 1358
Query 1349 CCAATTATTTTGGACCTTGTTCTTCTTGCTGAGCTCA-CTACTC-GGATCCAGTTCATGG 1406
||||| || ||||| |||||||| || || ||||||| | || | ||||||||||||
Sbjct 1359 CCAATCATCTTGGATCTTGTTCTCCTCGCGGAGCTCAGC-AC-CAGGATCCAGTTCAAAT 1416
Query 1407 CCGAAACCGAGGGAAAGTTCCATTCTTTCCATCCGGTGGCT-CCTCTCCTAAGTTACCTC 1465
|||| ||||||||||| || ||||||||||| ||||| || | || || ||||||
Sbjct 1417 CCGAGGGAGAGGGAAAGTTTCACTCTTTCCATCCTGTGGCCACCA-TACTCAGCTACCTC 1475
Query 1466 TCAAAGGCACCACTGGTCCCTCCTGGCACGCCAGTTG-TGAATGCTTTGTCGAAACAGCG 1524
| ||||||||||| || || || || || || || | | || || ||||||| |||||
Sbjct 1476 ACCAAGGCACCACTTGTACCGCCGGGAACTCCGGT-GATTAACGCACTGTCGAAGCAGCG 1534
Query 1525 TGCAATGCTTGAGAACAT-ACTCAGAGCTTGTGTTGGACTTGCTCCTGAGAACAACATGA 1583
|| ||||| ||||| || | | || || || |||||||| ||||| |||||||||||||
Sbjct 1535 GGCTATGCTGGAGAATATTA-TGAGGGCGTGCGTTGGACTGGCTCCGGAGAACAACATGA 1593
Query 1584 TTC-TCGAGTACAAGTGA 1600
| | | || | |||||||
Sbjct 1594 T-CATGGAATTCAAGTGA 1610
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89959376640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5