BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg487887
Length=2826
Score E
Sequences producing significant alignments: (Bits) Value
AT5G10540.1 | Symbols: | Zincin-like metalloproteases family p... 4372 0.0
AT5G65620.1 | Symbols: | Zincin-like metalloproteases family p... 2455 0.0
AT5G10550.1 | Symbols: GTE2 | global transcription factor group... 147 8e-34
> AT5G10540.1 | Symbols: | Zincin-like metalloproteases family
protein | chr5:3328065-3334971 FORWARD LENGTH=2852
Length=2852
Score = 4372 bits (2367), Expect = 0.0
Identities = 2713/2867 (95%), Gaps = 76/2867 (3%)
Strand=Plus/Plus
Query 1 TCCACTACCGCCGCTTCTCATTCTCTTCCTCGTCAATCTCCATCAATGGCTTCTCAAGAT 60
||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 10 TCCACTACCGCCGCTTCTCATTCTCTTTCTCGTCAATCTCAATCAATGGCTTCTGAAGAT 69
Query 61 TCTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCTGTTGAT 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 70 ACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGAT 129
Query 121 GCTCACCATGTCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 GCTCACCATGTCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGAG 189
Query 181 CAGCTAGAAAAAACTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGATT 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 CAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGATT 249
Query 241 ATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACACG 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 ATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACACA 309
Query 301 CCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCAGAGAAGGTGAAGTACCAGCTCAGG 360
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 310 CCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCAGG 369
Query 361 TTGGGACAGAGCAAACCCATTTACAATGCATTTAAAGCTATTCGAGAATCGCCTGACTGG 420
||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct 370 TTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACTGG 429
Query 421 AAATCACTGACCGAAG--C-TC--C-----------G--CAAATAAAGGAGGCGGTTCTC 462
|| ||| ||| ||||| | || | | ||||||||||||||||||||
Sbjct 430 AATTCATTGAGCGAAGCTCGTCAACGATTAGTTGAAGCCCAAATAAAGGAGGCGGTTCTG 489
Query 463 AGTGGTATTGCTCTTGAAGACGACAAGAGAGAAGAATTTAACAAAATTGAACAGGAACTT 522
|||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 490 AGTGGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAACAAAATTGAACAGGAACTT 549
Query 523 GAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAATTTGAAAAG 582
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 550 GAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAGTTTGAAAAG 609
Query 583 TTGATAACAGACAAGAAAGAGATCGAGGGGTTGCCGCCATCTGCACTTGGATTGTTCGCA 642
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 610 TTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCTGCACTTGGATTGTTCGCA 669
Query 643 CAAGCAGCTGCTTCCAAGGGACATGAAAATGCAACTGCTGACACTGGACCATGGCTCATT 702
|||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 670 CAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGACACTGGACCATGGCTCATT 729
Query 703 ACACTCGATGCTCCTAGTTATCTTCCCGTCATGCAACATGCCAAAAACCGAGCTCTGCGC 762
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 730 ACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCCAAAAACCGAGCTCTGCGC 789
Query 763 GAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAGCA 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 GAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAGCA 849
Query 823 ATTATCGACCAAATCTTGAAGCTTCGATTGGAAAAGGCTAAGCATCTTGGTTACAGAAAT 882
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 850 ATTATCGACCAAATCTTGAAGCTTCGACTGGAAAAGGCTAAGCTTCTTGGTTACAGAAAT 909
Query 883 TATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTAGAGAAAGCAGATGAGCTACTA 942
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 910 TATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGGAGAAAGCAGATGAGCTACTA 969
Query 943 GAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAAGAGT 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 GAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAAGAGT 1029
Query 1003 TTTGCAAAGAACCAAGGTGCTGCAGAAGCTGACAGTTTGACTCACTGGGACATCACTTTC 1062
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1030 TTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTGACTCACTGGGACATCACTTTC 1089
Query 1063 TGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACCTTAC 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 TGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACCTTAC 1149
Query 1123 TTCTCACTGCCAAAGGTTATGGATGCATTATTCGGTCTAGCTAAGACACTATTTGGAATT 1182
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1150 TTCTCATTGCCAAAGGTTATGGATGCGTTATTCGGTCTAGCTAAGACACTATTTGGAATT 1209
Query 1183 GATGTTGTGCCAGCAGATGGTGTAGCTCCGGTCTGGAACAGCGATGTTAGGTTCTACTGT 1242
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1210 GATGTTGTGCCAGCAGACGGTGTAGCGCCGGTCTGGAACAGCGATGTTAGGTTCTACTGT 1269
Query 1243 GTCAAAGATTCTTCTGGAAATCCAACTGCTTATTTCTACTTTGATCCCTACTCTCGTCCT 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1270 GTCAAAGATTCTTCTGGAAATCCAACTGCTTATTTCTACTTTGATCCCTACTCTCGCCCT 1329
Query 1303 TCAGAAAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAGTCATGGCC 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 TCAGAAAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAGTCATGGCC 1389
Query 1363 CAGAAGGGTTCCTCCGTTAGGCTCCCTGTTGCTCAAATGGTCTGCAACCAAACTCCACCA 1422
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1390 CAGAAGGGTTCCTCCGTTAGACTCCCTGTTGCTCAAATGGTCTGCAACCAAACTCCACCT 1449
Query 1423 GTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCCATGAATTT 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCCATGAATTT 1509
Query 1483 GGCCATGCTCTTCAGCATATGCTTACCAAAGAAGATGAGGGGCTAGTGGCTGGTATCCGA 1542
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1510 GGCCATGCTCTTCAGCATATGCTTACCAAAGAGGATGAGGGGCTAGTGGCTGGTATCCGG 1569
Query 1543 AATATCGAGTGGGATGCAGTTGAATTACCTTCACAGTTTATGGAGAACTGGTGCTACCAC 1602
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1570 AATATCGAGTGGGATGCAGTTGAATTACCGTCACAGTTTATGGAGAACTGGTGCTACCAC 1629
Query 1603 AGGGATACCTTAATGAGCATTGCTAAGCATTATCAAACAGGAGAAACTCTTCCCGAGAAT 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1630 AGGGATACCTTAATGAGCATTGCTAAGCATTATCAAACAGGAGAAACTCTTCCCGAGAAT 1689
Query 1663 GTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTTAGTCTTCGCCAG 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 GTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTTAGTCTTCGCCAG 1749
Query 1723 TTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCAGGTGGGACAGAG 1782
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1750 TTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCAGGTGGGGCAGAG 1809
Query 1783 ACCATCTACGATGTTGATCAAAGGGTGTCCATAAAAACACAAGTGATCCCTCCACTTCCT 1842
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 ACCATCTACGAAGTTGATCAAAGGGTGTCCATAAAAACACAAGTGATCCCTCCACTTCCT 1869
Query 1843 GAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTTATGCAGCTGGATAC 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 GAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTTATGCAGCTGGATAC 1929
Query 1903 TACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAGCTTTTGAAGATGCT 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1930 TACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAGCTTTTGAAGATGCT 1989
Query 1963 GGGTTGGATGACATCAAGGCTGTTAAAGAAACAGGACAAAGATTCAGAAACACAATACTC 2022
|||||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||
Sbjct 1990 GGGTTGGATGACATTAAGGCTGTCAAAGAAACAGGACAGAGATTCAGAAACACTATACTT 2049
Query 2023 GCTCTGGGAGGAGGAAAAGCACCTCTAAAAGTGTTTGTGGAGTTCAGAGGACGAGAACCT 2082
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2050 GCTCTGGGAGGAGGAAAAGCTCCTCTAAAAGTGTTTGTGGAGTTCAGAGGACGAGAACCT 2109
Query 2083 TCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCTGCTTGAAGTCTTGAA 2142
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2110 TCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCTGCTTGAA--CT--AA 2165
Query 2143 CTAATAATGTCCTTTGCTACTCTCACACTCAACTTTGGGATTATTAATGTCATTCAATGA 2202
| || |||||||||||||||||||||||||||||||| |||||||||||||| ||| |
Sbjct 2166 -T--TA-TGTCCTTTGCTACTCTCACACTCAACTTTGGGTTTATTAATGTCATTAAATAA 2221
Query 2203 AATTAAACTTTTTTACTTGCTTGTT-CACTGAGCATGCTT-C---AAGTATTGTAGTAAA 2257
||||||||||||| |||||||||| | |||||||||||| | |||| |||||||||
Sbjct 2222 AATTAAACTTTTTC-CTTGCTTGTTTC-CTGAGCATGCTTTCTTCAAGTGTTGTAGTAAT 2279
Query 2258 CATCTCAGAGATGTGCAACTTGGTAACAAAATAA-TGGTTCATGAACGAAACGAACAAAG 2316
||||||| ||| ||||| || ||||| |||| || |||||||| ||||||||||||| ||
Sbjct 2280 CATCTCATAGAAGTGCAGCT-GGTAAAAAAAAAAATGGTTCATAAACGAAACGAACAGAG 2338
Query 2317 ATAATACTTTTTCTTCGAACCATTTTCACATTCTCCACTACATATTTCTTC-ATTCCTCT 2375
|||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct 2339 ATAATA-TTTTTCTTCGAACCATTTTCACATTCTCCACTACATTTTTCTTAGAT-CCTCT 2396
Query 2376 CAATCTTTTCTTTTACTAAGTCACTCTCAACCCTCTGTTCATGGTGTCACCAATAATCTA 2435
| |||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 2397 CGATCTTTTCTT--ACTAAGTCACTCT---------GTTCATGGTGTCACCAATAATCTA 2445
Query 2436 AAAGAACTAAAGAACCTTAATCTGAAAGAGGAAAAGGA-ACT---CTTCCACCTCTT-GC 2490
|| |||| | |||||||||||||||||||||| | |||||||||||| ||
Sbjct 2446 AA-GAAC-------C-TTAATCTGAAAGAGGAAAAGGACAGAAAACTTCCACCTCTTTGC 2496
Query 2491 TCAACCTAGAAATTCTCTAACTACCCTTTACATTTTTTCCTCTATCTACTGTTTCCCTAA 2550
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2497 TCAACCTAGAAATTCACTAACTACCCTTTACATGTTTTCCTCTATCTACTGTTTCCCTAA 2556
Query 2551 AACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTT--T--CCCTT---T--ACACCGAAG 2601
|||||||||||||||||||||||||||||||||| | ||||| | |||| |||
Sbjct 2557 CACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTTCCTTTCCCTTCCATTTACACA-AAG 2615
Query 2602 -TTCCACCTCCGCCCAAATTCTCCGATTCTAGTCTCCTGGAGTTGTTATGCATATATCAA 2660
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2616 GTTCCACCTCCACCCAAATTCTCCGATTCTAGTCTCCTGGAGTTGTTAAGCATATTTCAA 2675
Query 2661 CGTACGGTCAACAGTTATTACGGGGCTTCTTTTGCTTCCACAAATGGAGATTGCACACTA 2720
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2676 CGTACGGTCAACAATTATTACGGGGCTTCTTTTGCTTCCACAAATGGAGACTGCACACTA 2735
Query 2721 TCCGCATCCGAATCACTTCCTGATGAACTCCCTGACTCCGAATCTGCATAGAGTGCCATA 2780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2736 TCCGCATCCGAATCACTTCCTGATGAACTCCCTGACTCTGAATCTGCATAGAGTGCCATA 2795
Query 2781 CAAAAATCGAAGGGCACAAGATCATTTCAGAGGGATA-GAATCTCTT 2826
||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 2796 CAAAACTCGAAGGGCACAAGATCATTTCAGAGGGATATGA-TCTCTT 2841
> AT5G65620.1 | Symbols: | Zincin-like metalloproteases family
protein | chr5:26221932-26225903 FORWARD LENGTH=2514
Length=2514
Score = 2455 bits (1329), Expect = 0.0
Identities = 1854/2104 (88%), Gaps = 50/2104 (2%)
Strand=Plus/Plus
Query 62 CTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCTGTTGATG 121
|||| |||||||||||||| |||||| | || || |||||||||||||| || |||||||
Sbjct 300 CTCTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATG 359
Query 122 CTCA-CCATG-TCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGA 179
| || |||| || | ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 360 C-CAGTCATGTTC-GTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGA 417
Query 180 GCAGCTAGAAAAAACTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGAT 239
| ||||||| ||| |||| ||||| ||||||||||||| ||||| ||||||||||| ||
Sbjct 418 GGAGCTAGAGAAATCTGTGGAGCCAACATGGCCAAAACTGGTGGAACCATTAGAGAAAAT 477
Query 240 TATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACAC 299
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 478 CGTTGATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAGGCTGTCAAGGACAC 537
Query 300 GCCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCAGAGAAGGTGAAGTACCAGCTCAG 359
|||||||| ||||||||||| ||||| |||||||||||||| ||||||| |||||||||
Sbjct 538 ACCTGAGCTACGTGCTGCCATCGAAGACGTTCAGCCAGAGAAAGTGAAGTTCCAGCTCAG 597
Query 360 GTTGGGACAGAGCAAACCCATTTACAATGCATTTAAAGCTATTCGAGAATCGCCTGACTG 419
|||||| || ||||| || ||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct 598 GTTGGGGCAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTG 657
Query 420 G--A--AATCACTG-A-C-CG--AA-GC----T----CCGCAAATAAAGGAGGCGGTTCT 461
| | ||| || | | || || || | | ||||||||||||||||||||
Sbjct 658 GTCATCGCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATAAAGGAGGCGGTTCT 717
Query 462 CAGTGGTATTGCTCTTGAAGACGACAAGAGAGAAGAATTTAACAAAATTGAACAGGAACT 521
|| ||||||||||||||| || || ||||||||||| ||||| |||||||||||||||||
Sbjct 718 CATTGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAATAAAATTGAACAGGAACT 777
Query 522 TGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAATTTGAAAA 581
||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 778 CGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCAACAAAGAAATTTGAAAA 837
Query 582 GTTGATAACAGACAAGAAAGAGATCGAGGGGTTGCCGCCATCTGCACTTGGATTGTTCGC 641
|||||||||||||||||||||||||||||| ||||| |||||||| ||||| | |||||
Sbjct 838 GTTGATAACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTTGGGCTATTCGC 897
Query 642 ACAAGCAGCTGCT-TCCAAGGGACATGAAAATGCAACTGCTGACACTGGACCATGGCTCA 700
||||||||||| | |||||||| |||||||||||||||||||| | |||||||||| |||
Sbjct 898 ACAAGCAGCTG-TCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCA 956
Query 701 TTACACTCGATGCTCCTAGTTATCTTCCCGTCATGCAACATGCCAAAAACCGAGCTCTGC 760
||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 957 TTACACTGGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAAAACCGTGCTCTGC 1016
Query 761 GCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAG 820
| ||||||||||||||||||||| |||| ||||||||||| || ||||| |||||||| |
Sbjct 1017 GTGAGGAAGTCTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACGG 1076
Query 821 CAATTATCGACCAAATCTTGAAGCTTCGATTGGAAAAGGCTAAGCATCTTGGTTACAGA- 879
||||||| ||||| || ||||||||||| |||||||| ||||||| ||||||||||| |
Sbjct 1077 CAATTATTGACCAGATTTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACA-AC 1135
Query 880 AATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTAGAGAAAGCAG-ATGAGCT 938
||||| ||||||||||||||||| | ||||||||||||||| |||||||||| | |||||
Sbjct 1136 AATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCA-GAGCT 1194
Query 939 ACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAA 998
|||| |||||||| ||||| || |||||| |||||||||||||||| |||||||| ||
Sbjct 1195 TTTAGAGAAGCTTCGTAGTGCATCCTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAA 1254
Query 999 GAGTTTTGCAAAGAACCAAGGTGCTGCAGAAGCTGACAGTTTGACTCACTGGGACATCAC 1058
|||||| ||||||||||| |||||||||||| |||||||| ||||||| ||||||| |||
Sbjct 1255 GAGTTTCGCAAAGAACCAGGGTGCTGCAGAATCTGACAGTATGACTCATTGGGACACCAC 1314
Query 1059 TTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACC 1118
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1315 TTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTACGTCC 1374
Query 1119 TTACTTCTCACTGCCAAAGGTTATGGATGCA-TTATTCGGTCTAGCTAAGACACTATTTG 1177
|||||||||||||||||||||||||||| | || ||| |||||||||||||||| ||||
Sbjct 1375 ATACTTCTCACTGCCAAAGGTTATGGATGGACTT-TTCAGTCTAGCTAAGACACTTTTTG 1433
Query 1178 GAATTGATGTTGTGCCAGCAGATGGTGTAGCTCCGGTCTGGAACAGCGATGTTAGGTTCT 1237
|||||||| ||| |||||||||||| |||||||||||||||||| |||||| ||||||
Sbjct 1434 GAATTGATATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAATGATGTTCGGTTCT 1493
Query 1238 ACTGTGTCAAAGATTCTTCTGGAAATCCAA-CTGCTTA-TTTCTACTTTGATCCCTACTC 1295
|| | ||||||||||||||||| || |||| | ||||| ||| ||||||||||| |||||
Sbjct 1494 ACCGCGTCAAAGATTCTTCTGGGAACCCAATC-GCTTACTTT-TACTTTGATCCATACTC 1551
Query 1296 TCGTCCTTCAGA-AAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAG 1354
||| || ||||| ||| |||| ||||||||||||||||| ||| |||| ||||||||||
Sbjct 1552 TCGCCCGTCAGAGAAA-AGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAG 1610
Query 1355 TCATGGCCCAGAAGGGTTCCTCCGTTAGGCTCCCTGTTGCTCAAATGGTCTGCAACCAAA 1414
||||||| ||||| || || || |||||||| |||||||| || ||||||||||||||||
Sbjct 1611 TCATGGCTCAGAAAGGCTCTTCTGTTAGGCTGCCTGTTGCACACATGGTCTGCAACCAAA 1670
Query 1415 CTCCACCAGTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCC 1474
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 1671 CTCCACCAGTAGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTC 1730
Query 1475 ATGAATTTGGCCATGCTCTTCAGCATATGCTTACCAAAGAAG-ATGAGGGGCTAGTGGCT 1533
|||||||||| |||||||||||||| |||||||| || | || ||||||||||||| |||
Sbjct 1731 ATGAATTTGGACATGCTCTTCAGCACATGCTTACGAA-GCAGGATGAGGGGCTAGTTGCT 1789
Query 1534 GGTATCCGAAATATCGAGTGGGATGCAGTTGAATTACCTTCACAGTTTATGGAGAACTGG 1593
||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct 1790 GGTATCCGAAATATCGAGTGGGACGCGGTTGAATTACCATCACAGTTTATGGAGAATTGG 1849
Query 1594 TGCTACCACAGGGATACCTTAATGAGCATTGCTAAGCATTATC-AAACAGGAGAAACTCT 1652
|||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| ||
Sbjct 1850 TGCTACCACAGGGACACTTTAATGAGCATTGCTAAGCATTA-CGAAACAGGAGAAACACT 1908
Query 1653 TCCC-GAG-AATGTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTT 1710
||| ||| || ||||||||||| || ||||| |||||||||||||||||||||||| ||
Sbjct 1909 -CCCAGAGGAA-GTATACAAGAAACTCCTGGCCGCAAGAACATTCCGTGCAGGGTCCTTT 1966
Query 1711 AGTCTTCGCCAGTTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCA 1770
|||||||| |||||||| ||||| | |||||||| |||||||||||||||||| | |||
Sbjct 1967 AGTCTTCGTCAGTTGAAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATACGTACCA 2026
Query 1771 GGTGGGAC-AGAGACCATCTACGATGTTGATCAAAGGGTGTCCA-TAAAAACACAAGTGA 1828
|| || || |||| ||||||| || || ||||||||||| || | ||||||| ||||| |
Sbjct 2027 GGAGG-ACCAGAGTCCATCTATGACGTAGATCAAAGGGTATC-AGTAAAAACCCAAGTTA 2084
Query 1829 TCCCTCCACTTCCTGAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTT 1888
|||||||||||||||| |||||||| ||||||||||||||||| || ||||| || || |
Sbjct 2085 TCCCTCCACTTCCTGAGGATAGATTTCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGAT 2144
Query 1889 ATGCAGCTGGATACTACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAG 1948
||||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||
Sbjct 2145 ATGCAGCTGGATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCTGATGCATTTTCAG 2204
Query 1949 CTTTTGAAGATGCTGGGTTGGATGACATCAAGGCTGTTAAAGAAACAGGACAAAGATTCA 2008
| |||||||| ||||| | || ||||||||||||||||||||||||||||| |||||||
Sbjct 2205 CATTTGAAGACGCTGGACTAGACGACATCAAGGCTGTTAAAGAAACAGGACAGAGATTCA 2264
Query 2009 GAAACACAATACTCGCTCTGGGAGGAGGAAAAGCACCTCTAAAAGTGTTTGTGGAGTTCA 2068
||||||| ||||| || || |||||||| ||||| ||||| || |||||||| ||||| |
Sbjct 2265 GAAACACCATACTTGCACTTGGAGGAGGGAAAGCGCCTCTTAAGGTGTTTGTTGAGTTTA 2324
Query 2069 GAGGACGAGAACCTTC-CCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCT 2127
|||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 2325 GAGGACGAGAACCTTCACCC-GAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCT 2383
Query 2128 GCTT 2131
||||
Sbjct 2384 GCTT 2387
> AT5G10550.1 | Symbols: GTE2 | global transcription factor group
E2 | chr5:3332855-3335232 REVERSE LENGTH=2037
Length=2037
Score = 147 bits (79), Expect = 8e-34
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 2680 ACGGGGCTTCTTTTGCTTCCACAAATGGAGATTGCACACTATCCGCATCCGAATCACTTC 2739
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1969 ACGGGGCTTCTTTTGCTTCCACAAATGGAGACTGCACACTATCCGCATCCGAATCACTTC 1910
Query 2740 CTGATGAACTCCCTGACTCCGAATC 2764
||||||||||||||||||| |||||
Sbjct 1909 CTGATGAACTCCCTGACTCTGAATC 1885
Score = 67.6 bits (36), Expect = 6e-10
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Minus
Query 2547 CTAAAACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTT 2585
|||| ||||||||||||||||||||||||||||||||||
Sbjct 2037 CTAACACTCAAAATCTTTTCTTTCGAGTTTCCCTTCCTT 1999
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140417273457
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5