BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg487982 Length=1429 Score E Sequences producing significant alignments: (Bits) Value AT5G11460.1 | Symbols: | Protein of unknown function (DUF581) ... 2017 0.0 > AT5G11460.1 | Symbols: | Protein of unknown function (DUF581) | chr5:3656811-3658931 REVERSE LENGTH=1439 Length=1439 Score = 2017 bits (1092), Expect = 0.0 Identities = 1346/1460 (92%), Gaps = 52/1460 (4%) Strand=Plus/Plus Query 1 GAGAGAGAGAAGAGTACCTCACAAGACTTGCACAGATATATAGACGAAAGACTTCTCATT 60 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1 GAGAGAGAGAAGAGTACCTCACAAGACTTGCACAGATATAT--ACGTAAGACTTCTCATT 58 Query 61 G--t-c-ttctt-t-c-t-t-cttcttc-tccttcttcttcAAC-TTTACCTCAGAAGGA 109 | | | ||||| | | | | ||||| | ||||||||||||||| ||||||||||||| | Sbjct 59 GTCTGCTTTCTTCTCCTTCTCCTTCTCCTTCCTTCTTCTTCAACTTTTACCTCAGAAGCA 118 Query 110 AGAACAAGTCCTGAAGAAATTTCCAGATCATCAATCATGTCTCAGCATTCCAACTATCAA 169 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 119 AGAACAAGTCCTGAAG-AA--CCCAGATCATCAATCATGTCTCAGCATTCCAACTATCAA 175 Query 170 ATGGCCACTGCTTCTGATTACTATTCGACAAAACCGGTCTTGTCAGGGATTAAG-AGCCA 228 ||| |||||||||||||||||||||||||||||||||||||||||| |||| || ||||| Sbjct 176 ATGACCACTGCTTCTGATTACTATTCGACAAAACCGGTCTTGTCAGCGATT-AGAAGCCA 234 Query 229 CAAACTCATCTCTAGTTTGTTTGAAGGAAAGTCTCCATCTGATTGTGAATCAGCTTGGAG 288 |||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||| Sbjct 235 CAAACTCATCTCTAGTGTGTTTGAAGGAAAGTGTCCATCTGACTATGAATCAGCTTGGAG 294 Query 289 CCCAACTTCTCCTTTGGATTTCAGATTGTTCTCGACTTTAGGGAACCCTTTTGGTGCTTC 348 ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| | Sbjct 295 CCCAACTTCTCCTTTGGATTTCAGATTGTTCTCCACTTTAGGGAACCC-TTT--TGCTGC 351 Query 349 TTCTTCTTCTTTGAGGTCAATCTGGAAAGGGAAACAAAAGAGCTGGGATTCTGGTAAAGT 408 ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 352 TTCTTCTTC---GAGGTCAATCTGGAGAGGGAAACAAAGGAGCTGGGATTCTGGTAAAGT 408 Query 409 TGGCTTGAGCATTGTTCATTCTCTTGTTGATG---ATCACACTGATTCATCATCAAGGAT 465 |||||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||| Sbjct 409 AGGCTTGAGCATTGTGCATTCTCTTGTTGATGATCATCACACTGATTCATCAGCAACGAT 468 Query 466 TGTTCTACCATCACCGGATAGTAAAAACATAATCTTTGGGTCCTTGATGAGAAGTGGCCA 525 |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 469 TGTTTTACCATCACCGGATAGTAAAAACATAATCTTTGGATCTTTGATGAGAAGTGGCCA 528 Query 526 GAAACCTCATCTACTCTCTCAACCCCTTGCCAAAGCTTTGATCCCCAAGAATGATATACC 585 ||||||||||||||||||||||||| || ||||||||||||| |||||| ||| |||||| Sbjct 529 GAAACCTCATCTACTCTCTCAACCCTTTACCAAAGCTTTGATGCCCAAGGATGTTATACC 588 Query 586 CAATGTTGTTTTTGAGATTGGACCTGATGTGCTTGATGTGGTTGAGCTACAAAAATCTGG 645 |||| ||||||||||||||||| ||||||| |||||||| ||||||| | ||||||||| Sbjct 589 AAATGCTGTTTTTGAGATTGGACATGATGTGATTGATGTGCTTGAGCTTCGAAAATCTGG 648 Query 646 CTCGGTC---GCTGCTTACTGCTCCGGTGCTGGGAACTTCAGTGTGAACAACAATGCTTG 702 ||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 649 CTCCGTCGATGCTGCTTACTGTTCCGGTGCTGAGAACTTCAGTGTGAACAACAATGCTTG 708 Query 703 TCAGGTGATCAAGCAAGCCCCAGGATCACTTAATGGGGGTACAGGAAGTGACATTGAGAC 762 |||||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||| Sbjct 709 TCAGGTGACCAAGCAAGACCCAGGATCACTTAATGGGGGTACTGAAAGTGACATGGAGAT 768 Query 763 CTCAGAGGACTACACTTGTGTTATTTCACATGGTCCTAACCCCAAAACCACCCATTTTTA 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 CTCAGAGGACTACACTTGTGTTATTTCACATGGTCCTAACCCCAAAACCACCCATTTTTA 828 Query 823 CGGGGATCAGGTTCTGGAGTCCGTAGAGAACAATGAGTTGAAGAACAGTTGTTGC-AGTA 881 ||||||||||||| |||||||||||||| | | |||||||||||| |||||||| || | Sbjct 829 CGGGGATCAGGTTATGGAGTCCGTAGAGCGCGAGGAGTTGAAGAACCGTTGTTGCAAG-A 887 Query 882 ACAAGAAAAAGAGCATTTTTGCAGTTGCTCCTCTCGACTTGACAACACCTGTTGATGTGT 941 || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 888 ACGAGAAAGAGAGCATTTTTGCTGTTGCTCCTCTCGACTTGACAACACCTGTTGATGTGT 947 Query 942 TACCTCCCAAAGACTTCTTGAGCTTCTGCTACGGCTGTAGCAAGAAGTTGGTTATGGG-G 1000 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 948 TACCTCCCAAAGACTTCTTGAGCTTCTGCTACGGCTGTAGCAAGAAGTTGGGTATGGGAG 1007 Query 1001 AAAGATATATACATGTACAGTGGATACAAAGCGTTCTGCAGTAGTGAGTGCCGTTCAAAG 1060 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1008 AA-GATATATACATGTACAGTGGATACAAAGCGTTCTGCAGTAGTGAGTGCCGTTCAAAG 1066 Query 1061 GAGATAGATCGGGATGAGAAAATGGAGGATG-A-A-GAAGAAG---CAATCAAGTCTGCC 1114 |||||||||| ||||||| |||||||||||| | | ||||||| |||||||||||| | Sbjct 1067 GAGATAGATCTGGATGAGGAAATGGAGGATGGAGATGAAGAAGAAGCAATCAAGTCTGTC 1126 Query 1115 TCGTCTTCAGAGAAGGACCTGTCTAAGAAGAAGAGTAACGGTGTGTTCTTCACCGTGGGC 1174 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1127 TCGTCTTCAGACAAGGA---GTCTAAGAAGAAGAGTAACGGTGTGTTCTTCACCGTGGGC 1183 Query 1175 TGATTCCAATGCTCCCACCATTTCCATGATCGATTTGAGTCCATGAAAAGAGGAAAAGTA 1234 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 TAATTCCAATACTCCCACCATTTCCATGATCGATTTGAGTCCATGAAAAGAGGAAAAGTA 1243 Query 1235 GAAGCTTGAGCTGATCATCTGTTCAAGAAAAA-GAGCTGTTGGTTTCTTTAAACCGAGGC 1293 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1244 GAAGCTTGAGCTGATCATCTGTTCAAGAAAAAAGAGCTGTTGGTTTCTTTAAACTGAGGC 1303 Query 1294 GGCCATGGATGATCATTTTTGTATATTGCTTGTGCTTCTGCT-ACCTAACaaaaaaa--- 1349 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1304 GGCCATGGATGATCATTTTTGTATATTGCTTGTGCTTCTGCTTACCTAACAAAAAAAAAA 1363 Query 1350 TACTTTTGGTCTCATCTCTCATGGTTTGGGTGGGTGATTGAGTGGAACTATGGCTCTTGT 1409 ||||||||||||||||||||||||||| |||||||||||| || |||||||| |||| Sbjct 1364 TACTTTTGGTCTCATCTCTCATGGTTTTGGTGGGTGATTG-GTC---CTATGGCTATTGT 1419 Query 1410 TATGGATATTTATAATTATG 1429 |||||||||||||||||||| Sbjct 1420 TATGGATATTTATAATTATG 1439 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70431364635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5