BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488090
Length=3963
Score E
Sequences producing significant alignments: (Bits) Value
AT5G12430.1 | Symbols: TPR16 | Heat shock protein DnaJ with tet... 6192 0.0
> AT5G12430.1 | Symbols: TPR16 | Heat shock protein DnaJ with tetratricopeptide
repeat | chr5:4027979-4034086 REVERSE LENGTH=3994
Length=3994
Score = 6192 bits (3353), Expect = 0.0
Identities = 3783/3987 (95%), Gaps = 43/3987 (1%)
Strand=Plus/Plus
Query 1 ATGAGCAAGTTCGGCGACTTGAATCCCGCCTTCTCTGGTGTGGGTCGAAGCAGCAGC--- 57
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1 ATGAGCAAGTTCGGCGAATTGAATCCCGCCTTCTCTGGTGCGGGTCGAAGCAGCAGCAAT 60
Query 58 AATAACCCCGACGCGAGTTTCAATTCAGCGCCGTTTCCGCGGTCATCTTCTGGTCTCTCT 117
|||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||||||||||
Sbjct 61 AATAACCCTGACGCGAGTTTCAATTCTGCGCCTTTTCCACGGTCGTCTTCTGGTCTCTCT 120
Query 118 AAGCCCAGATTCTCCAAGGTGAGAAGGCAAGTAAAGTCTCAGAATTTGAAGCCCTCGGGG 177
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AAGCCTAGATTCTCTAAGGTGAGAAGGCAAGTAAAGTCTCAGAATTTGAAGCCCTCGGGG 180
Query 178 ACTTCTGATTCTTTACCGGGTCAGAGTTTCAACCCGTTTCACTCCCGTGGGTCTTTTGCC 237
||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||| ||
Sbjct 181 ACTTCTGATTCCTTACCGGGTCAGAGTTTTAACCCGTTTCACTTCCGTGGATCTTTTTCC 240
Query 238 GGTGATCCAACTCCTAGTGAGATCGGATTTGGACGGAGCAGCAATGAGGGTTTTGTA-TT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 241 GGTGATCCAACTCCTAGTGAGATCGGATTTGGACGGAGCAGCAATGAGGGTTTTGTATTT 300
Query 297 --TGGATCAACTGATGTTGGGAAATTGCACTCTGATGATGAAATTGGGAAAAGAGTTATG 354
||||||| || |||||| |||||||| |||||||| ||||||||| ||||||||||
Sbjct 301 GGTGGATCATCTCATGTTGATAAATTGCAATCTGATGAAAAAATTGGGATAAGAGTTATG 360
Query 355 GAGGAGATGGAAAAGTTGAAAATTGAGAGTGAAGGAAAGGCTTCAAAGCTTCCTGAAGAT 414
|| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 361 GAAGAGATGGAAAGGTTGAAAATTGAGAGTGAAGGAAAGGCTTCAAGGCTTCCTGAAGAT 420
Query 415 ATGAAGAATTTGAATTCTAGCTTTAGTTTTGGTGTAAAGAAGGGAAGCAAT---TCAGTT 471
||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||
Sbjct 421 ATGCAGAATTTGAATTCTAGCTTCAGTTTTGGTGTAAAGAAGGGAAGCAATAACTCCGTT 480
Query 472 TTTGCAGCGAAAGAT-GAACTTCCAACTTTGTTAAGTAATAAACTGACTATTGATTCTTC 530
|||||| | | | |||||||||||| |||||||||||||||||| ||||||||| ||
Sbjct 481 TTTGCA---ACTG-TGGAACTTCCAACTCTGTTAAGTAATAAACTGATTATTGATTCATC 536
Query 531 TTCGAGGAGTACAGGACATGTGATCCAGGAAAGTATGGAGAAGTTGAATATTTCAGAGAG 590
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 537 TTCGAGGAGTACAGGACACGTGATCCAGGAAAGTATGGAGAAGTTGAATATTTCGGAGAG 596
Query 591 GGTGACTGATCAGAGACATAGTAATAACGTCAAATCCAAAGTGTCTATGGATTATGTTGG 650
|| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 597 GGGGACTGATCAGAAACAGAATAATAACGTCAAATCCAAAGTGTCTATGGATTATGTTGG 656
Query 651 GGAGAAGATACTATCTGATGATTTGAGTAGAAAGTTAAGTGTTGCAAGTATGACTACTGA 710
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 657 GGAGAAGATACTATCTGATGATTTGAGTAGAAAGTTAAGTGTTGGAAGTATGACTACTGA 716
Query 711 TGGGAACCTTTCTGGAGATTCAGTTCAGGGAAGTGTGAATGGGAAGAACGTCCATGATTT 770
|||||| | ||||||||||||| ||||||||||||| |||| |||||| |||||||||||
Sbjct 717 TGGGAATCATTCTGGAGATTCATTTCAGGGAAGTGTAAATGAGAAGAAAGTCCATGATTT 776
Query 771 TAATAGTTCATGTCCGATGAACTATAGTTTTGTAGGTACAGAGCCAAGTCAAAATCTGAA 830
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 TAACAGTTCATGTCCGATGAACTATAGTTTTGTAGGTACAGAGCCAAGTCAAAATCTGAA 836
Query 831 TGCTAGAAGTGTTCATGATGTTTCCTCTACAGTAAATACTTCCGAGTTTAATTTTTTGAG 890
|||||||| ||| |||||||| |||||||||||||||||||| || ||||||||| ||||
Sbjct 837 TGCTAGAAATGTCCATGATGTGTCCTCTACAGTAAATACTTCAGATTTTAATTTTGTGAG 896
Query 891 TAATCAAGACAGTCG-G-GGTACAGGTTTTATGGAATTCAAGACCCCTAATTCGAAAGTA 948
||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct 897 TAATCAAGACAGT-GTGAAG-ACAGGTTTTATGGAATTCAAGACCCCTAATTCGAAAGTA 954
Query 949 AACCCATTTTCTAGTTTGGACCAGAAATTGGGGTTCAATGCGAAGAAGGACAGTGTTGGT 1008
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 AACCCATTTTCTAGTTTGGACCAGAAATTGGGGTTCAATGCGAAGAAGGACAGTGTTGGG 1014
Query 1009 GC--C-ACGAGAGCGAGAAGGAAAGGGGGTAAGCAGCCTGTGAAAGTGCAGCTAAATATT 1065
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 GCTACTACGAGAGCGAGAAGGAAAGGGGGTAAGCAGCCTGTGAAAGTGCAGCTAAATATT 1074
Query 1066 GGACGTGAGTTTGCTTTTGCAGAAAGTGCTACTCCAAATGGAAGCAATGAGGCTCCTGAG 1125
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1075 GGACGTGAGTTTGCTTTTGCAGAAAGTGCTATTCCAAATGGAAGCAATGAGGCTCCTGAG 1134
Query 1126 GCGTATTCACCTATGGATATTTCTCCATATGAGGTGACAGAAGATTGTGGAGACTTTTCT 1185
||||||||||| |||||||||||||||||||||| |||||||| |||| |||| ||||||
Sbjct 1135 GCGTATTCACCGATGGATATTTCTCCATATGAGGAGACAGAAGTTTGTAGAGAATTTTCT 1194
Query 1186 GCTGATATACCACCTACTGCTCCAAATGATTTGTTTGATGCAGAGCTAGTTGCTGCAACC 1245
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1195 GCTGATATACCACCTACTGCTCCAAATTATTTGTTTGATGCAGAGCTAGTTGCTGCAACC 1254
Query 1246 GAGCGGATGGAAATTAATGAGGGGGATGAAGTTAATAACTATCAAGCTAAAGAATTTAAT 1305
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1255 GAGAGGATGGAAATTAATGAGGGGGATGAAGTTAATAACTATCAAGCTGAAGAATTTAAT 1314
Query 1306 ACTGGAAAATGTGCTGATCATGAAGACCTTGCTGAAGGTTCTAGATCTGGAGCTGAAACT 1365
||||| || ||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 1315 ACTGGGAATTGTGCTGATCATGAAGACCTTGCTGGAGATTCTATATCTGGAGCTGAAACT 1374
Query 1366 GAAAGTTTTAAATCAGCAGCGGAAGAGATGGAAACTAGTAGTGAAACTTTTGCTACAGCT 1425
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1375 GAAAGTTTTAAATCAGCAGCCGAAGAGATGGAAACTAGTAGTGAAACTTTTGCTACAGCT 1434
Query 1426 TCAGAAAGTGAGGTTACTTCACGATATAAGTCTGATAGGCAAGAAAATGATGACCATTCC 1485
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1435 TCAGAAAGTGAGGTTACTTCACGATATAAGTCTGATAGGAAAGAAAATGATGACCATTCC 1494
Query 1486 CTTTCTAATACAGATGCTGCTAGCTCCAGCTTTACCTTTTCTGCTTCATCATTTTCGGGA 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CTTTCTAATACAGATGCTGCTAGCTCCAGCTTTACCTTTTCTGCTTCATCATTTTCGGGA 1554
Query 1546 GTGCAGGGGCAACTATTAACTTCAAAGCGTATCAATAGGAAGAAAAACCCAATTAAACTT 1605
|||||||||| ||||| |||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1555 GTGCAGGGGCCACTATCAACTTCGAAGCGTATCAATAGGAAGAAAAACCCGATTAAACTT 1614
Query 1606 GGGCAGGATCCATATATCCTAATTCCAAATGCAACACTACCATTAAAGTCTTCACAACAT 1665
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1615 GGGCAGGATCCATATATCCTAATTCCAAATGCTACACTACCATTAAAATCTTCACAACAT 1674
Query 1666 TCTCCGTTAACTGGTGTGCAGTCACACTTGCCCACTGGGAAACCCAGTGAAAGGGATCCA 1725
|||||||||||||||||||||||||| || |||| |||||||||||||||||||||||
Sbjct 1675 TCTCCGTTAACTGGTGTGCAGTCACATTTTTCCACAGGGAAACCCAGTGAAAGGGATCCG 1734
Query 1726 CTTACTCGTCTACACAAGCCTATTAATAGTTCTGTGATGGACAAAGCACGAATCGAAAAA 1785
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1735 CTTACTCGTCTACACAAGCCTATTAATAATTCTGTGATGGAAAAAGCACGAATCGAAAAA 1794
Query 1786 GATGTGTCTAATGTAGCGCAAGAAGCATGTGAAAAGTGGCGATTAAGAGGAAACAATGCT 1845
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1795 GATGTGTCTAATGCAGCGCAAGAAGCATGTGAAAAGTGGCGATTAAGAGGAAACAATGCT 1854
Query 1846 TATAAAATTGGAGATCTTTCCAGAGCTGAGGAATCTTACACTCAAGGGATTGATTCAGTG 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 TATAAAATTGGAGATCTTTCCAGAGCTGAGGAATCTTACACTCAAGGGATTGATTCAGTG 1914
Query 1906 CCTAGAATCGAAACTTCTAGAAACTGTCTCAGGGCATTGATGCTTTGCTACAGCAACCGT 1965
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1915 CCTAGAATCGAAACTTCTAGAAACTGTCTCAGGGCATTAATGCTTTGCTATAGCAACCGT 1974
Query 1966 GCTGCGACACGCATGGCCCTTGGAAGAATGAGAGAAGCAATAGCAGATTGTACGATGGCT 2025
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1975 GCTGCAACACGCATGGCCCTTGGAAGAATGAGAGAAGCAATAGCAGATTGTACGATGGCT 2034
Query 2026 TCTTCAATAGACTCCAACTTCCTTAAAGTTCAAGTCAGAGCTGGAAATTGTTACCTTTCA 2085
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2035 TCTTCAATAGACTCCAACTTCCTTAAAGTTCAAGTCAGAGCTGCAAATTGTTACCTTTCA 2094
Query 2086 CTTGGGGAGATTGAAGATGCTTCCAGGTATTTCAAAAAATGCTTACAATCCGGAAGTGAC 2145
|||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 2095 CTTGGGGAGATTGAAGATGCATCCAGGTATTTCAAAAAATGCTTGCAATCAGGAAGTGAC 2154
Query 2146 ATTTGTGTGGACCGTAAAATTATTGTAGAGGCTTCTGAAGGTCTACAAAAGGCACAGAGA 2205
|| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 2155 ATCTGTGTGGACCGTAAAATTATTGTCGAGGCTTCTGAAGGTCTACAAAAGGCGCAGAGA 2214
Query 2206 GTTTCCGAATGCATGCATGAAGCTGGTCGTCGTTTGCAACTTAGAACATCAACTGATGCT 2265
||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 2215 GTTTCTGAATGCATGCATGAAGCTGGCCGTCGTTTGCAACTTAGAACATTAACTGATGCT 2274
Query 2266 GAAAAAGCTTTGGAAATACTGGAAGAATCTCTTTTGATAAGTTCATACTCTGAAAAGTTA 2325
|||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||
Sbjct 2275 GAAAAAGCTTTGGAAATATTGGAAGATTCTCTTTTGATAAGTACATACTCTGAAAAGTTA 2334
Query 2326 CTCACCATGAAAGGAGAGGCGCTCTTGATGCTTGAGAAGTATGAAGCAGCAATAAAGCTT 2385
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2335 CTCACTATGAAGGGAGAGGCGCTCTTGATGCTTGAGAAGTATGACGCAGCAATAAAGCTT 2394
Query 2386 TGTGAGCAGACAGTTGATTTGGCTGGAAAGAATTCTCTTCCAGATTCTCATGACACTCCC 2445
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2395 TGTGAGCAGACAGTTGATTTGGCTGGAAAGAATTCTCCTCCAGATTCTCATGACACTCCC 2454
Query 2446 AAGGACACAAACTTTAGAATTTGGCAGTGTCATGTCATGCTTAAATCATA-TTTCCATAT 2504
||||||| ||||||||||||||||||||||||| |||||||||||||| | |||| ||||
Sbjct 2455 AAGGACATAAACTTTAGAATTTGGCAGTGTCATCTCATGCTTAAATCA-AGTTTCTATAT 2513
Query 2505 GGGAAAGCTTGAGGAGGCAAGTGCTTCTCTAGAGAAGCAAGAACAACTACTATCTGCTAC 2564
|||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct 2514 GGGAAAGCTTGAGGAGGCGATTGCGTCTCTAGAGAAGCAAGAACAACTACTATCTGCTAC 2573
Query 2565 AAAAAGAGACGGAAACAAAACTCTTGAATCCTCCATTCCATTGGCTGCTACTATACGTGA 2624
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2574 AAAAAGAGAAGGAAACAAAACTCTTGAATCCTCCATTCCGTTGGCTGCTACTATACGTGA 2633
Query 2625 GTTGTTGCGCCTTAAGTCGGCAGGGAATGAAGCCTTTCAGTCTGGACGACACACTGAAGC 2684
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2634 GTTGTTGCGCCTTAAGGCGGCAGGGAATGAAGCCTTTCAGTCTGGACGACACACTGAAGC 2693
Query 2685 AGTTGAACATTACACAGCAGCCCTGGCTTGCAATGTGGAATCACGTCCTTTTACAGCTGT 2744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2694 AGTTGAACATTACACAGCAGCCCTGGCTTGCAATGTGGAATCACGTCCTTTTACAGCTGT 2753
Query 2745 GTGTTTCTGTAATCGTGCTGCTGCATATAAGGCTCTTGGTCAATATTCTGACGCTATTGC 2804
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 2754 GTGTTTCTGTAATCGTGCAGCTGCATATAAGGCTCTTGGTCAATTTTCTGACGCTATTGC 2813
Query 2805 AGACTGCAGCCTTGCTATTGCTCTTGACCAAAATTACTCAAAGGCTATTTCTAGACGGGC 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2814 AGACTGCAGCCTTGCTATTGCTCTTGACCAAAATTACTCAAAGGCTATTTCTAGACGGGC 2873
Query 2865 CACGTTGTTCGAGATGATTAGGGATTATGGGCAGGCAGCAAGTGATATGGAGAGATATGT 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2874 CACGTTGTTCGAGATGATTAGGGATTATGGGCAGGCAGCAAGTGATATGGAGAGATATGT 2933
Query 2925 TAATATTCTAACCAAGCAACTGGAAGAGAAGACCTCTGGAATTATTGACAGATCCACTAG 2984
||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||
Sbjct 2934 TAATATTCTAACCAAGCAAATGGAAGAGAAGACCTCTGGAACCCTTGACAGATCTACTAG 2993
Query 2985 TATGGCCAATGACATAAGACAAGCTCGTATACGACTTTCTGAACTGGAAGAGAAATCAAG 3044
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2994 TATGTCCAATGACATAAGACAAGCTCGTATACGACTTTCTGAACTGGAAGAGAAATCAAG 3053
Query 3045 GAAAGAAAGTTCATTGGATATGTACCTCGTCTTGGGTGTTGTACCATCATGCTCGGCTTC 3104
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3054 GAAAGAAAATTCATTGGATATGTACCTCGTCTTGGGTGTTGTACCATCATGCTCGGCTTC 3113
Query 3105 AGATATCAGAAAGGCGTATAGGAAGGCCGCACTCAAACATCATCCCGACAAGGCTGGTCA 3164
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3114 AGATATCAGAAAGGCATATAGGAAGGCCGCACTCAAACATCATCCCGACAAGGCTGGTCA 3173
Query 3165 GTCTTTGACAAGAAACGAGACTAAAGATGAGAGGTTATGGAAGGAGATAGGAGAAGAAGT 3224
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3174 GTCTTTGACAAGAAACGAGACTAAAGATGAGAGGTTATGGAAGGAGATAGGGGAAGAAGT 3233
Query 3225 GCGCAAAGATACCGATAAATTATTTAAAATGATTGGGGAAGCGTATGCTGTGCTTTCAGA 3284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3234 GCGCAAAGATACCGATAAATTATTTAAAATGATTGGGGAAGCGTATGCTGTGCTTTCAGA 3293
Query 3285 CCCTGCAAAGCGTTCTCAGTATGATCTTGAAGAAGAGATGCATAATTCGCAAAAGAGGCG 3344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3294 CCCTGCAAAGCGTTCTCAGTATGATCTTGAAGAAGAGATGCATAATTCGCAAAAGAGACG 3353
Query 3345 TGATGGAAGCAGCACATCTGGAGCAGACACGGATAATTATCCTTTCCAAAGCAGTAGAAG 3404
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 3354 TGATGGAAGCAGCACATCTGGAGCAGACACAGATAATTATCCTTTCCACAGCAGTAGAAG 3413
Query 3405 AAACTGGAGGGAGGGATGGAGTTCACGTAAAGACCCATCAACTCCGAGGTGGTTTGATCC 3464
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3414 AAACTGGAGGGAAGGATGGAGTTCACGTAAAGACCCATCAACTCCGAGGTGGTTTGATCC 3473
Query 3465 AAACCGATCAAACAGATACCCGTTGTAACTGTAATCATCTGGTAGGTATCGTTTACCAAA 3524
||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||
Sbjct 3474 AAACCGATCAAACAGATACCCGT---AACTGTAATCATCTCGAAGGTATCGTTTACCAAA 3530
Query 3525 TTCCTCAGCAGCTAC-GTTGAGTACTCCTGCAAATACTCAGGCTGGTAAGGCA-TGGATA 3582
||||||||||| || ||||| | ||||||||||||| ||||| ||||||||| || |||
Sbjct 3531 TTCCTCAGCAG-TAAAGTTGATTCCTCCTGCAAATACACAGGCCGGTAAGGCACTG-ATA 3588
Query 3583 GTATTATATTCGTGGAAGAAGATACACATCACACGATTGAGATGCCGGAAATTTACGCAA 3642
||||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 3589 GTATTATCTTCATGGAAGAAGATACACATTACACGATTGAGATGCCGGAAATCTACGCAA 3648
Query 3643 GTAATGGAGAAAAAGAAGGAGTCTCTGTATTGTATACTCGTTTTGTTCGTGAGGTATAGA 3702
||||||||||||| |||| | ||||| ||||||||||||||||||||| ||||||| |||
Sbjct 3649 GTAATGGAGAAAAGGAAGAATTCTCTCTATTGTATACTCGTTTTGTTCATGAGGTAGAGA 3708
Query 3703 CTTCGACGTTGTTCTCCATATGAAGAAACATTGTACAGG-TCACAGGGAACGTAGAGTGG 3761
|||| | |||||| |||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 3709 CTTC-A--TTGTTCCCCATGTGAAGAAACATTGTACAGGGTCACAGGGAACGTAGAGTGG 3765
Query 3762 GTGATTGAAGGAGACATACATATAGAGTGtttttttttttt-ttATGTTTCTTGGGGTCG 3820
| |||||||||||||||||||||| ||| | | |||||||| ||||||| ||| ||||||
Sbjct 3766 GCGATTGAAGGAGACATACATATAAAGT-TATGTTTTTTTTGTTATGTT-CTTTGGGTCG 3823
Query 3821 TGAAGAAAGACAATGTGTGATCTCTCTTGTTGTTAACCCTTTTGATTGTAGATTGTCTCA 3880
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 3824 TGAAGAAAGACAATGTGTGGTCTCTCTTGTT-TTAACCCTTTTGATTGTAGATTGTCTCA 3882
Query 3881 ATTCATTGATTTCTGGAAAA-ATTCTTCTAA---ATTTGTTTTTGCATTTATGAAAAATA 3936
||||||||||||||| |||| | || | ||| ||||| ||||||||||||||||||||
Sbjct 3883 ATTCATTGATTTCTGCAAAAGAGTCAT-TAAGCTATTTGATTTTGCATTTATGAAAAATA 3941
Query 3937 TATGATGTTTGCATGTTTGTAAAAATT 3963
|||| |||||| ||||||||| |||||
Sbjct 3942 TATGTTGTTTGAATGTTTGTAGAAATT 3968
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 197457087648
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5