BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488097
Length=2036
Score E
Sequences producing significant alignments: (Bits) Value
AT5G12480.1 | Symbols: CPK7 | calmodulin-domain protein kinase ... 3001 0.0
AT5G19450.1 | Symbols: CDPK19, CPK8 | calcium-dependent protein... 1746 0.0
> AT5G12480.1 | Symbols: CPK7 | calmodulin-domain protein kinase
7 | chr5:4047515-4050533 REVERSE LENGTH=2116
Length=2116
Score = 3001 bits (1625), Expect = 0.0
Identities = 1757/1821 (96%), Gaps = 8/1821 (0%)
Strand=Plus/Plus
Query 1 ATGGAAACACATAAAAAATTAGGAGTGGTCGTTCTTTGAATCCATTCGCAAGCaagaaga 60
||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||
Sbjct 1 ATGGAAACACATAAAAAATTAAGAGTTGTCATTCTTTGAATCC--CCGCAAGCAAGAAGA 58
Query 61 agaagaag-agaagagagtcaatttgtgtg-tttgtcattcgaagaagagagagaaagag 118
|||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 59 AGAAGAAGAAGAAGAGAGTCAATTTGTGTGTTTTGTCATTTGAAGAAGAGAGAGAAAGAG 118
Query 119 gaagaCTTTGACTCGtcttcttcctctcttcttctctctctATCACTGCATCTATTTTTT 178
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 119 GAAGACTTTGACTCGTCTTCTTCCTCTCTTCTTCTCTCTCTATCACTGCATTTGTTTTTC 178
Query 179 CTCACACCGAATCC-TGAGATTTGACTAGATGGGGAATTGTTGTGGCAGTCCGGGTTCGG 237
|||||| |||| || |||||||||| |||||||||||||||||||||| |||| ||||||
Sbjct 179 CTCACAGCGAA-CCTTGAGATTTGATTAGATGGGGAATTGTTGTGGCAATCCGAGTTCGG 237
Query 238 CTACGAACGAGAGTAAGCAAGGAAAACCCAAGAACAAAAACAATCCTTTTTACAGCAATG 297
|||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 238 CTACGAACCAGAGTAAACAAGGGAAACCCAAGAACAAAAACAATCCTTTTTACAGCAATG 297
Query 298 AATACACTGCAACAGATAGATCTGGAGCTGGTTTTAAGCTCTCTGTGCTTAAAGATCCTA 357
||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 298 AATACGCTACAACAGATAGATCTGGAGCTGGTTTTAAGCTCTCTGTGCTGAAAGATCCTA 357
Query 358 CAGGACATGATATATCCTTGCAGTATGAT-TTGGGACGTGAGGTTGGTCGAGGCGAGTTT 416
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 358 CAGGACATGATATATCCTTGCAGTATGATCTT-GGACGTGAGGTTGGTCGAGGCGAGTTT 416
Query 417 GGTATAACTTACTTGTGTACTGATAAGGAAACAGGTGACAAGTATGCCTGCAAGTCCATA 476
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 417 GGTATAACTTACTTGTGTACTGATAAGGAAACTGGTGAGAAGTATGCCTGCAAGTCCATA 476
Query 477 TCGAAGAAGAAGCTGAGAACAGCAGTTGATATTGAGGATGTTAGGAGGGAGGTTGAGATT 536
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 477 TCTAAGAAGAAGCTGAGAACAGCAGTTGATATAGAGGATGTTAGGAGGGAGGTTGAGATT 536
Query 537 ATGAAGCATATGCCTAAACACCCAAATGTCGTCTCTTTGAAGGATGCCTTTGAGGATGAT 596
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 537 ATGAAGCATATGCCTAAACACCCAAATGTCGTCTCTTTGAAGGATTCCTTTGAGGATGAT 596
Query 597 GATGCGGTGCATATAGTTATGGAGTTGTGTGAAGGAGGGGAACTGTTTGATCGGATTGTT 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GATGCGGTGCATATAGTTATGGAGTTGTGTGAAGGAGGGGAACTGTTTGATCGGATTGTT 656
Query 657 GCAAGAGGTCATTACACTGAGCGAGCTGCTGCTGCGGTTATGAAGACTATTGTTGAAGTT 716
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 657 GCAAGAGGTCATTACACTGAGCGGGCTGCTGCTGCGGTTATGAAGACTATTGTTGAAGTT 716
Query 717 GTTCAGATATGCCATAAGCAGGGAGTGATGCATCGGGATCTTAAACCAGAGAACTTTCTT 776
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 717 GTTCAGATATGCCATAAGCAAGGAGTGATGCATCGGGATCTCAAACCAGAGAACTTTCTT 776
Query 777 TTTGCAAATAAGAAAGAGACATCACCCCTCAAGGCCATTGATTTTGGATTATCTGTATTC 836
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 777 TTTGCAAATAAGAAAGAGACATCAGCCCTTAAGGCCATTGATTTTGGATTATCTGTATTC 836
Query 837 TTCAAACCTGGTGAGCAGTTTAATGAGATTGTTGGAAGTCCTTATTACATGGCACCCGAG 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 TTCAAACCTGGTGAGCAGTTTAATGAGATTGTTGGAAGTCCTTATTACATGGCACCCGAG 896
Query 897 GTGCTGCGGCGAAACTATGGACCTGAGATCGACGTCTGGAGCGCTGGAGTCATCCTCTAT 956
|||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||
Sbjct 897 GTGCTGCGGCGAAACTATGGTCCTGAGATCGATGTGTGGAGCGCTGGAGTTATCCTCTAT 956
Query 957 ATCCTACTTTGTGGTGTCCCGCCATTTTGGGCTGAGACTGAACAAGGGGTGGCTCAAGCG 1016
||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||
Sbjct 957 ATCCTACTTTGTGGTGTTCCGCCATTTTGGGCAGAGACTGAGCAAGGGGTGGCTCAAGCG 1016
Query 1017 ATCATTAGGTCAGTAATTGACTTTAAGAGAGATCCATGGCCGAGAGTTTCTGACAGCGCC 1076
|||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1017 ATCATTAGATCAGTTATTGACTTTAAGAGAGATCCATGGCCAAGAGTTTCTGACAGCGCC 1076
Query 1077 AAAGACCTTGTGAGAAAGATGCTTGAACCTGATCCaaaaaaaCGGCTTACTGCTGCACAA 1136
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1077 AAAGACCTTGTGAGAAAGATGCTTGAACCTGATCCCAAAAAACGGCTTACTGCTGCACAA 1136
Query 1137 GTGCTCGAACATACTTGGATACTGAATGCAAAGAAGGCTCCAAATGTCTCTCTTGGGGAG 1196
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 GTTCTCGAACATACTTGGATACTGAATGCAAAGAAGGCTCCAAATGTCTCTCTTGGGGAG 1196
Query 1197 ACTGTGAAAGCAAGGCTCAAGCAGTTTTCTGTTATGAACAAGCTCAAGAAACGAGCTCTA 1256
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 ACTGTGAAAGCAAGACTAAAGCAGTTTTCTGTTATGAACAAGCTCAAGAAACGAGCTCTA 1256
Query 1257 CGAGTGATAGCTGAACACTTGTCAGTGGAGGAAGCAGCAGGGATAAAGGAAGCATTTGAA 1316
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 CGAGTGATAGCTGAACATTTGTCAGTGGAGGAAGCAGCAGGGATAAAGGAAGCATTTGAA 1316
Query 1317 ATGATGGACGTAAACAAGAGAGGCAAGATAAATCTCGAGGAGCTTAAATATGGACTTCAA 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 ATGATGGACGTAAACAAGAGAGGCAAGATAAATCTCGAGGAGCTTAAATATGGACTTCAA 1376
Query 1377 AAAGCTGGACAACAGATCGCCGATGCTGATCTTCAAATTCTTATGGAAGCTACTGATGTT 1436
||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 1377 AAAGCTGGACAACAGATAGCTGATACTGATCTTCAAATTCTTATGGAAGCTACTGATGTT 1436
Query 1437 GATGGGGATGGGACACTGAACTATAGCGAGTTTGTTGCGGTTTCGGTCCACCTTAAGAAG 1496
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1437 GATGGGGATGGGACACTGAACTATAGCGAGTTTGTTGCTGTTTCAGTCCACCTTAAGAAG 1496
Query 1497 ATGGCGAATGATGAACACTTGCATAAAGCTTTTAACTTCTTTGATCAGAACCAGAGTGGT 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 ATGGCGAATGATGAACACTTGCATAAAGCTTTTAACTTCTTTGATCAGAACCAGAGTGGT 1556
Query 1557 TACATAGAGATTGAAGAACTTCGTGAAGCCTTGAATGATGAATTGGATAATACTAGTAGT 1616
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1557 TACATAGAGATTGACGAACTTCGTGAAGCCTTGAATGATGAATTGGATAATACTAGCAGT 1616
Query 1617 GAGGAAGTAATCGCAGCCATCATGCAAGATGTTGATACCGACAAGGACGGACGAATAAGC 1676
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1617 GAGGAAGTAATCGCAGCCATCATGCAAGATGTTGATACCGACAAGGATGGACGAATAAGC 1676
Query 1677 TATGAAGAGTTTGTTGCGATGATGAAAGCTGGGACAGATTGGAGAAAAGCATCAAGGCAA 1736
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1677 TATGAAGAGTTTGTTGCGATGATGAAAGCTGGGACAGATTGGAGAAAAGCGTCAAGACAG 1736
Query 1737 TATTCCCGGGAAAGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGATGGTTCATTGCAA 1796
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1737 TATTCTCGGGAAAGATTCAACAGTTTAAGCCTCAAGTTAATGAGAGATGGTTCATTGCAA 1796
Query 1797 TTAGAAGGCGAGACCTAAGAA 1817
|||||||||||||||||||||
Sbjct 1797 TTAGAAGGCGAGACCTAAGAA 1817
Score = 311 bits (168), Expect = 2e-83
Identities = 205/222 (92%), Gaps = 5/222 (2%)
Strand=Plus/Plus
Query 1818 CATTGTCAAAAAGACATAACTATTATGTTCTATAAGCATTTAACACGGTAATGATAGAAA 1877
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 CATTGTCAAAAAGAAATAACTATTATGTTCTATAAGCATTTAACACGGTAATGATAGAAA 1946
Query 1878 GATTGGTCGTGGTCGTAGGTTCT-TTTGAGGGCTTTCAATATGTTTGAAAAGTTGTTCCA 1936
||||||||||||||||||||| | ||| |||||||||||| ||||||||||||| ||| |
Sbjct 1947 GATTGGTCGTGGTCGTAGGTTTTGTTT-AGGGCTTTCAATTTGTTTGAAAAGTTCTTCAA 2005
Query 1937 TGGACAGCGATGTGATTGATGATGATGTCAAACAAGTTTCTGAGATTCCAAGGATATGAG 1996
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||
Sbjct 2006 TGGACAGCGATGTGATTGATGATGATGTCGAACAAGTTTCTGAGATTCCAAAGATACGAG 2065
Query 1997 TTT-GTGATTGTAAA-CATTTTATTTATAAGCTGGTATAAGA 2036
||| |||||||||| ||| | ||||||||| |||| |||||
Sbjct 2066 TTTTGTGATTGTAATTCATAT-ATTTATAAGATGGTGTAAGA 2106
> AT5G19450.1 | Symbols: CDPK19, CPK8 | calcium-dependent protein
kinase 19 | chr5:6558426-6561534 REVERSE LENGTH=1911
Length=1911
Score = 1746 bits (945), Expect = 0.0
Identities = 1408/1629 (86%), Gaps = 42/1629 (3%)
Strand=Plus/Plus
Query 207 ATGGGGAATTGTTGTGGC-AGTCCGGGTTCGGCTACGAAC-GAGAGTAAGCAA-GGAAAA 263
||||| ||||||||| || || |||||||||| | | || | ||||||| || || |||
Sbjct 64 ATGGGAAATTGTTGT-GCGAGCCCGGGTTCGG--A-G-ACTGGGAGTAAG-AAGGGGAAA 117
Query 264 CCCAAGAACAAAAACAATCCTTTTTACAG-CAATGAATACACTGCAACAG-ATAGATCTG 321
|| |||| ||||| || || ||||| || || | ||||||| || | || ||||||
Sbjct 118 CCAAAGATCAAAAGTAACCCGTTTTATAGTGAA-GCATACACT---AC-GAATGGATCTG 172
Query 322 GAGCTGGTTTTAAGCTCTCTGTGCTT-AAAGATCCTACAGGACATGATATATC-CTTGCA 379
|| |||| || ||||||||||| || |||||||| ||||||||||||||||| ||| |
Sbjct 173 GAACTGGGTTCAAGCTCTCTGT-TTTGAAAGATCCAACAGGACATGATATATCTCTT--A 229
Query 380 -GTATGATTTGGGACGTGAGGTTGGTCGAGGCGAGTTTGGTATAACTTACTTGTGTACTG 438
||||||| |||| |||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct 230 TGTATGATCTGGGGCGTGAGGTTGGTCGCGGAGAGTTTGGTATTACTTACTTGTGCACTG 289
Query 439 ATAAGGAAACAGGTGACAAGTATGCCTGCAAGTCCATATCGAAGAAGAAGCTGAGAACAG 498
||| |||| || || |||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct 290 ATATCAAAACGGGCGAGAAGTATGCGTGCAAGTCTATATCAAAGAAGAAGCTTAGAACAG 349
Query 499 CAGTTGATATTGAGGATGTTAGGAGGGAGGTTGAGATTATGAAGCATATGCCTAAACACC 558
| || ||||| ||||||||||||||||| |||||||| ||||| |||||||||| |||||
Sbjct 350 CTGTGGATATAGAGGATGTTAGGAGGGAAGTTGAGATAATGAAACATATGCCTAGACACC 409
Query 559 CAAATGTCGTCTCTTTGAAGGATGCCTTTGAGGATGATGATGCGGTGCATATAGTTATGG 618
||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 410 CAAATATCGTGTCGCTGAAGGATGCCTTTGAGGATGATGATGCAGTGCATATAGTTATGG 469
Query 619 AGTTGTGTGAAGGAGGGGAACTGTTTGATCGGATTGTTGCAAGAGGTCATTACACTGAGC 678
|||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct 470 AGTTGTGTGAAGGAGGTGAGCTGTTTGATCGGATTGTTGCTAGAGGTCATTATACTGAGC 529
Query 679 GAGCTGCTGCTGCGGTTATGAAGACTATTGTTGAAGTTGTTCAGATATGCCATAAGCAGG 738
||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| |
Sbjct 530 GAGCTGCTGCTGCAGTGATGAAGACTATTCTTGAAGTTGTTCAGATATGCCATAAGCATG 589
Query 739 GAGTGATGCATCGGGATCTTAAA-CCAGAGAACTTTCTTTTTGCAAATAAGAAAGAGACA 797
|||||||||||||||||| |||| || ||||||||||| ||||||||||| |||||||||
Sbjct 590 GAGTGATGCATCGGGATC-TAAAGCCTGAGAACTTTCTCTTTGCAAATAAAAAAGAGACA 648
Query 798 TCACCCCTCAAGGCCATTGATTTTGGATTATCTGTATTCTTCAAACCTGGTGA-GCAGTT 856
||| |||| || ||||| |||||||||||||| || |||||||| |||||||| | | ||
Sbjct 649 TCAGCCCTTAAAGCCATAGATTTTGGATTATCAGTCTTCTTCAAGCCTGGTGAGGGA-TT 707
Query 857 TAATGAGATTGTTGGAAGTCCTTATTACATGGCACCCGAGGTGCTGCGGCGAAACTATGG 916
|| |||||||||||||||||||||||||||||||| ||||| || ||||||| || ||
Sbjct 708 CAACGAGATTGTTGGAAGTCCTTATTACATGGCACCAGAGGTACTTAGGCGAAATTACGG 767
Query 917 ACCTGAGATCGACGTCTGGAGCGCTGGAGTCATCCTCTATATCCTACTTTGTGGTGTCCC 976
||||||| | || ||||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct 768 ACCTGAGGTTGATATCTGGAGTGCTGGAGTTATCCTTTATATCCTGCTCTGTGGTGTCCC 827
Query 977 GCCATTTTGGGCTGAGACTGAACAAGGGGTGGCTCAAGCGATCATTAGGTCAGTAATTGA 1036
||||||||||| |||||||| |||||||||||||| ||||||||||||||||| || ||
Sbjct 828 ACCATTTTGGGCCGAGACTGAGCAAGGGGTGGCTCAGGCGATCATTAGGTCAGTTATCGA 887
Query 1037 CTTTAAGAGAGATCCATGGCCGAGAGTTTCTGACAGC-GCCAAAGACCTTGTGAGAAAGA 1095
||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| ||||
Sbjct 888 CTTTAAGAGGGATCCATGGCCGAGAGTTTCTGAGA-CTGCCAAAGACCTTGTGAGGAAGA 946
Query 1096 TGCTTGAACCTGATCCaaaaaaaCGGCTTACTGCTGCACAAGTGCTCGAACATACTTGGA 1155
|||| |||||||| || |||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct 947 TGCTCGAACCTGACCCCAAAAAACGGCTTTCTGCTGCACAAGTACTCGAACATTCTTGGA 1006
Query 1156 TACTGAATGCAAAGAAGGCTCCAAATGTCTCTCTTGGGGAGACTGTGAAAGCAAGGCTCA 1215
||| ||||| ||||||||||||||||| || || || ||||| ||||||||||| ||||
Sbjct 1007 TACAAAATGCGAAGAAGGCTCCAAATGTTTCACTCGGCGAGACGGTGAAAGCAAGACTCA 1066
Query 1216 AGCAGTTTTCTGTTATGAACAAGCTCAAGAAACGAGCTCTACGAGTGATAGCTGAACACT 1275
| |||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||
Sbjct 1067 AACAGTTTTCTGTTATGAACAAGCTCAAGAAAAGAGCGCTACGGGTGATAGCCGAACACT 1126
Query 1276 TGTCAGTGGAGGAAGCAGCAGGGATAAAGGAAGCATTTGAAATGATGGAC-GTAAACAAG 1334
| ||||||||||||| ||| || || |||||||||||||| ||||||||| ||||| |||
Sbjct 1127 TATCAGTGGAGGAAGTAGCTGGCATCAAGGAAGCATTTGAGATGATGGACAGTAAA-AAG 1185
Query 1335 A-GAGGCAAGATAAATCTCGAGGAGCTTAAATATGGACTTCAAAAAGCT-GGACA--A-C 1389
| | || |||||||| |||||||||||||||| ||||||||| ||| || ||||| | |
Sbjct 1186 ACG-GGAAAGATAAACCTCGAGGAGCTTAAATTTGGACTTCATAAA-CTCGGACAGCAGC 1243
Query 1390 AGATCGCC-GATGCTGATCTTCAAATTCTTATGGAAGCTACTGATGTTGATGGGGATGGG 1448
|||| || ||| ||||||| || ||||| ||||||||| ||||||||||||||||||||
Sbjct 1244 AGAT-ACCTGATACTGATCTACAGATTCTGATGGAAGCTGCTGATGTTGATGGGGATGGG 1302
Query 1449 ACACTGAACTATAGCGAGTTTGTTGCGGTTTCGGTCCACCTTAAGAAGATGGCGAATGAT 1508
|| | || ||| | |||||||| || || || || || |||||||| |||||||| ||
Sbjct 1303 ACTTTAAATTATGGGGAGTTTGTGGCTGTCTCTGTGCATCTTAAGAAAATGGCGAACGAC 1362
Query 1509 GAACACTTGCATAAAGCTTTTAACTTCTTTGATCAGAACCAGAGTGGTTACATAGAGATT 1568
|||||||||||||| ||||||| ||| ||||| ||||| ||||| | |||||||||||||
Sbjct 1363 GAACACTTGCATAAGGCTTTTAGCTTTTTTGACCAGAATCAGAGCGATTACATAGAGATT 1422
Query 1569 GAAGAACTTCGTGAAGCCTTGAATGATGAATTGGATAATACTAGTAGTGAGGAAGTAATC 1628
|| || || ||||| || || |||||||| ||| |||||| ||||| ||||| |
Sbjct 1423 GAGGAGCTGCGTGAGGCTTTAAATGATGAGGTGG---ATACTAACAGTGAAGAAGTTGTT 1479
Query 1629 GCAGCCATCATGCAAGATGTTGATACCGACAAGGACGGACGAATAAGCTATGAAGAGTTT 1688
||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1480 GCAGCTATTATGCAAGATGTTGACACAGACAAGGACGGACGAATAAGCTATGAAGAGTTT 1539
Query 1689 GTTGCGATGATGAAAGCTGGGACAGATTGGAGAAAAGCATCAAGGCAATATTCCCGGGAA 1748
| ||||||||||||||||| ||||||||||| ||||| || ||||| ||||||||||||
Sbjct 1540 GCGGCGATGATGAAAGCTGGAACAGATTGGAGGAAAGCGTCGAGGCAGTATTCCCGGGAA 1599
Query 1749 AGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGATGGTTCATTGCAATTAGAAGGCGAG 1808
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1600 AGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGAAGGTTCATTGCAATTAGAAGGCGAA 1659
Query 1809 ACCTAAGAA 1817
| ||||||
Sbjct 1660 AATTAAGAA 1668
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100903095450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5