BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488114
Length=2535
Score E
Sequences producing significant alignments: (Bits) Value
AT5G12970.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 4132 0.0
AT1G51570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 920 0.0
AT4G11610.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 285 1e-75
> AT5G12970.1 | Symbols: | Calcium-dependent lipid-binding (CaLB
domain) plant phosphoribosyltransferase family protein |
chr5:4102135-4105327 FORWARD LENGTH=2557
Length=2557
Score = 4132 bits (2237), Expect = 0.0
Identities = 2439/2538 (96%), Gaps = 7/2538 (0%)
Strand=Plus/Plus
Query 1 CTCTTCTTCGAAATCTCATTTTCAACATCTTCACTTTCTTCTAAACTTTGCATTACAAAA 60
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1 CTCTTCTTCGCAATCTCATTTTTAACATTTTCACTTTCTTCTAAACTTTGCATTACAAAA 60
Query 61 AAGAATGTATTTCCAAGTTAGTT-TCTCTATTCTTCATTAGATCCCTTCAGAAGGGTTGT 119
|| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||
Sbjct 61 AACAATGTATTTCCAAGTT-GTTCTCTCTATTCTTCATTAGATCCCTTGAGAAGGGTTGT 119
Query 120 CTTAAGGTAACAGAACCAAGCAGCTTCCCCTGAAACTGCTTCTTATTACAAGTTCTTGGA 179
||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 120 CTT-AGATAACAGAACCAAGCAGCTTCCCCTGAAACTGCTTCTTCTTACAAGTTCTTGGA 178
Query 180 TCCTTTGTAACAGAATTGC-AGAAGTTTTCAAGATTCAGACAAGATGCAGAAACCTGGCC 238
| ||||| | | |||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 179 T-CTTTGCCATATAATTGCAAGAAGTTTTCAAGATTCAGACAAGATGCAGAAACCAGGGC 237
Query 239 AAAATATAGAATTTGCACTGAAGGAGACTTCACCAAAGATTGGTGCAGGAGCAGTGACAG 298
|||||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct 238 AAAATATAGATTTTGCACTGAAGGAAACTTCACCAAAGATTGGTGCAGGTTCTGTGACAG 297
Query 299 GTGATAAACTCTCCTGCACTTATGATTTGGTTGAGCAGATGCATTACCTCTACGTTCGGG 358
|||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 298 GTGATAAACTCTGCAGCACTTATGATTTGGTTGAGCAGATGCATTACCTCTACGTACGGG 357
Query 359 TAGTGAAGGCGAAGGAATTACCGGGGAAAGATGTGACCGGTAGTTGTGATCCATATGTGG 418
| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TCGTTAAGGCGAAGGAGTTACCGGGGAAAGATGTGACCGGTAGTTGTGATCCATATGTGG 417
Query 419 AAGTGAAGCTCGGAAACTACAGAGGGATGACTAAGCATTTTGAGAAGAAGTCGAATCCGG 478
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 418 AAGTGAAGCTCGGAAACTACAGAGGGATGACTAAGCATTTCGAGAAGAGGTCGAATCCGG 477
Query 479 AGTGGAAGCAAGTGTTTGCGTTTTCAAAGGAGAGAATCCAAGCATCAATCTTGGAGGTTG 538
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 478 AGTGGAAGCAAGTGTTTGCGTTTTCAAAGGAGAGGATCCAAGCATCAATCTTGGAGGTTG 537
Query 539 TAGTTAAAGACAAAGATGTGGTGTTGGATGATTTAATTGGTAGAATCATGTTTGATCTTA 598
| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
Sbjct 538 TCGTTAAAGACAAAGATGTGGTGTTAGATGATTTGATTGGTAGAATCATGTTTGATCTCA 597
Query 599 ATGAGATTCCTAAGCGAGTTCCGCCTGATAGTCCATTGGCTCCTCAGTGGTATAGGTTAG 658
||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 598 ATGAGATTCCTAAACGGGTACCGCCTGATAGTCCATTGGCTCCTCAGTGGTATAGGTTGG 657
Query 659 AGGATCGACATGGGCGTAAAGTTAAAGGAGAGCTTATGTTAGCTGTTTGGATGGGGACAC 718
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 658 AGGATCGACATGGGCGTAAGGTTAAAGGAGAGCTTATGTTAGCTGTTTGGATGGGGACAC 717
Query 719 AAGCCGATGAAGCTTTCTCTGATGCTTGGCATTCAGATGCAGCCTCGGTTGGACCTGAAG 778
|||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |
Sbjct 718 AAGCAGATGAAGCTTTTTCTGATGCTTGGCATTCAGATGCAGCCACGGTCGGACCTGAGG 777
Query 779 GTGTGACGCATATCCGTTCAAAGGTTTATCTTTCGCCAAAGCTTTGGTATGTGAGGGTCA 838
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 778 GTGTGACACATATCCGTTCAAAGGTTTATCTTTCGCCAAAGCTTTGGTATGTCAGGGTCA 837
Query 839 ATGTAATTGAGGCTCAAGATTTGATACCTCATGATAAAACCAAGTTCCCTGAGGTTTACG 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 ATGTAATTGAGGCTCAAGATTTGATACCTCATGATAAAACCAAGTTCCCTGAGGTTTACG 897
Query 899 TGAAAGCAATGCTCGGAAACCAGACTCTGAGAACACGTATTTCTCAGACCAAAACATTGA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 TGAAAGCAATGCTCGGAAACCAGACTCTGAGAACACGTATTTCTCAGACCAAAACATTGA 957
Query 959 ATCCGATGTGGAATGAAGATCTGATGTTTGTTGTTGCTGAGCCTTTTGAGG-AGCCATTG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct 958 ATCCGATGTGGAATGAAGATCTGATGTTTGTTGTTGCTGAGCCTTTTGAGGAAG-CTTTG 1016
Query 1018 ATTCTCGCGGTGGAAGATAGGGTTGCACCGAACAAAGATGAAACGTTAGGCAGGTGTGCA 1077
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1017 ATTCTCGCGGTGGAAGATAGGGTTGCACCGAATAAAGATGAAACGTTAGGCCGGTGTGCA 1076
Query 1078 ATCCCGTTGCAGAATGTCCAAAGAAGGTTAGACCATAGGCCGCTTAACTCGAGGTGGTTC 1137
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 ATCCCGTTGCAGAACGTCCAAAGAAGGTTAGACCATAGGCCGCTTAACTCGAGGTGGTTC 1136
Query 1138 AACCTGGAGAAACATATTATGGTGGAAGGAGAGAAAAAAGAGATCAAATTCGCAAGCAGG 1197
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1137 AACCTGGAGAAACATATTATGGTGGAAGGAGAGCAAAAAGAGATCAAATTCGCAAGCAGA 1196
Query 1198 ATTCATCTAAGAATCTTTCTTGAAGGTGGATACCATGTTCTTGATGAATCAACTCACTAC 1257
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1197 ATTCATCTAAGAATCTTTCTTGAAGGTGGGTACCATGTTCTTGATGAATCAACTCACTAC 1256
Query 1258 AGCAGCGACCTAAGGCCAACCGCAAAACAGCTATGGAAACCAAGCATCGGACTGCTTGAA 1317
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1257 AGCAGCGACCTAAGGCCAACCGCAAAACAGCTATGGAAACCGAGTATCGGACTGCTTGAA 1316
Query 1318 GTAGGGATCATAAGTGCGCACGGACTGATGCCAATGAAGACAAAAGATGGGAAGGGGACA 1377
||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct 1317 GTAGGGATCATAAGTGCACACGGGCTGATGCCAATGAAGTCAAAAGACGGGAAGGGGACA 1376
Query 1378 ACAGATGCATATTGTGTGGCTAAGTATGGGCAGAAATGGATCAGAACAAGAACAATTGTC 1437
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1377 ACAGATGCATATTGCGTGGCTAAGTATGGGCAGAAATGGATTAGAACAAGAACAATCGTG 1436
Query 1438 GATAGTTTTACGCCTAAATGGAACGAGCAGTACACATGGGAAGTGTTTGATACCTGCACT 1497
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1437 GATAGTTTTACGCCTAAATGGAATGAGCAGTACACATGGGAAGTGTTTGACACCTGCACT 1496
Query 1498 GTCATAACTTTTGGAGCATTCGACAACGGACACATTCCAGGAGGAAGCGGAAAAGATTTG 1557
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1497 GTCATAACTTTTGGAGCATTCGACAACGGACACATTCCAGGCGGAAGCGGAAAAGACTTG 1556
Query 1558 AGAATCGGGAAAGTGAGAATCCGTCTCTCGACCCTTGAAGCTGACCGTATCTACACACAT 1617
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 1557 AGAATCGGGAAAGTGAGAATCCGGCTCTCTACCCTTGAAGCTGACCGTATCTACACTCAT 1616
Query 1618 TCATATCCGCTGCTCGTCTTTCATCCTTCCGGGATCAAGAAGACAGGTGAAATACAATTA 1677
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1617 TCATATCCGCTACTCGTCTTTCATCCTTCTGGGATCAAGAAGACAGGTGAAATACAGTTA 1676
Query 1678 GCCGTGCGGTTCACTTGCCTATCTCTCATCAACATGCTTCATATGTATTCTCAGCCATTA 1737
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 GCTGTGCGGTTCACTTGCCTATCTCTCATCAACATGCTTCATATGTATTCTCAGCCATTA 1736
Query 1738 CTACCCAAAATGCATTACATCCACCCGTTATCGGTTCTCCAGCTGGACAGCCTGCGACAC 1797
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1737 CTACCCAAAATGCATTACATCCATCCGTTATCGGTTCTCCAGCTGGACAGCCTGAGACAC 1796
Query 1798 CAGGCGATGAACATTGTCTCGGCGAGGCTGAACCGCGCAGAGCCACCTCTTCGCAAAGAG 1857
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1797 CAGGCGATGAACATTGTCTCGGCAAGGCTGAACCGCGCAGAGCCGCCTCTTCGCAAAGAG 1856
Query 1858 ATTGTAGAGTACATGCTCGATGTTGACTCCCATATGTGGAGCATGAGGAGGAGTAAAGCT 1917
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 ATTGTGGAGTACATGCTCGATGTTGACTCCCATATGTGGAGCATGAGGAGGAGTAAAGCT 1916
Query 1918 AACTTCTTCAGAATCATGAATGTTCTGAGTGGTCTCATTGCTGTTGGAAAATGGTTTGAT 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 AACTTCTTCAGAATCATGAATGTTCTGAGTGGTCTCATTGCTGTTGGAAAATGGTTTGAT 1976
Query 1978 CAGATCTGCAACTGGAGAAACCCAATAACCACAATTCTCATTCATGTTCTTTTCATTATC 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 CAGATCTGCAACTGGAGAAACCCAATAACCACAATTCTCATTCATGTTCTTTTCATTATC 2036
Query 2038 TTAGTTCTCTACCCGGAACTCATCCTCCCAACGGTTTTCTTGTACCTTTTCTTGATCGGG 2097
|||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||
Sbjct 2037 TTAGTTCTTTACCCGGAATTAATCCTCCCAACGGTTTTCTTGTACCTTTTCTTGATTGGG 2096
Query 2098 ATCTGGAATTTCCGGTGGAGACCAAGGCACCCGCCACACATGGACACAAGGTTGTCCCAC 2157
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2097 ATCTGGAATTTCCGGTGGAGACCAAGGCACCCGCCACACATGGACACACGGTTGTCCCAT 2156
Query 2158 GCAGACGCTGTCCACCCCGATGAGCTTGATGAAGAGTTTGATACTTTCCCAACTTCCCGA 2217
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2157 GCAGACGCTGTTCACCCCGACGAGCTTGATGAAGAGTTTGATACTTTCCCGACTTCCCGA 2216
Query 2218 TCCTCTGAGATTGTGAGGATGCGATATGACCGGCTCAGAAGCATAGGGGGACGGGTTCAG 2277
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2217 TCCTCTGAGATTGTGCGGATGCGATATGACCGGCTCAGAAGCATAGGAGGACGGGTTCAG 2276
Query 2278 ACCGTGATAGGCGATCTAGCGACACAGGGAGAGCGGTTTTTATCGCTGCTGAGCTGGCGA 2337
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 2277 ACCGTGATAGGCGATCTAGCAACACAGGGAGAGCGGTTTTTATCGCTGCTGAGCTGGAGA 2336
Query 2338 GACCCGAGGGCAACCACATTGTTTGTGCTCTTCTGTCTCATAGCTGCTATCGTGTTGTAT 2397
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2337 GACCCGAGGGCAACCACATTGTTTGTGCTTTTCTGTCTCATAGCTGCTATCGTGTTGTAT 2396
Query 2398 GTTACACCGTTTCAGGTTGTTGCACTTCTTGCTGGGATCTATGTGCTGAGGCATCCAAGG 2457
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 GTTACGCCGTTTCAGGTTGTTGCACTTCTTGCTGGGATCTATGTGCTGAGGCATCCAAGG 2456
Query 2458 TTCAGGCACAAGCTACCCTCTGTGCCGCTCAATCTCTTCAGGAGGCTACCTGCAAGATCT 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 TTCAGGCACAAGCTACCCTCTGTGCCGCTCAATCTCTTCAGGAGGCTACCTGCAAGATCT 2516
Query 2518 GACAGTCTATTGTAGATA 2535
||||||||||| ||||||
Sbjct 2517 GACAGTCTATTATAGATA 2534
> AT1G51570.1 | Symbols: | Calcium-dependent lipid-binding (CaLB
domain) plant phosphoribosyltransferase family protein |
chr1:19122170-19124688 REVERSE LENGTH=2519
Length=2519
Score = 920 bits (498), Expect = 0.0
Identities = 1729/2302 (75%), Gaps = 170/2302 (7%)
Strand=Plus/Plus
Query 315 CACTTATGATTTGGTTGAGCAGATGCATTACCTCTACGTTCGGGTAGTGAAGGCGAAGGA 374
||| ||||| | || ||||| ||||| || ||||| ||||| || || ||||| || ||
Sbjct 90 CACATATGACCTCGTCGAGCAAATGCAGTATCTCTATGTTCGTGTCGTAAAGGCTAAAGA 149
Query 375 ATTACCGGGGAAAGA-TGTGACCGGTAGTTGTGATCCATATGTGGAAGTGAAGCTCGGAA 433
|||||| || ||||| | | || ||||||||||| || || || ||||| ||||| || |
Sbjct 150 ATTACCAGGTAAAGACT-TAACTGGTAGTTGTGACCCTTACGTTGAAGTTAAGCTTGGTA 208
Query 434 ACTACAGAGGGATGACTAAG-CATTTTGAGAAGAAGTCGAATCCGGAGTGGAAGCAAGTG 492
|||||||||| | ||| || ||||| |||||||| || ||||| |||||||| |||||
Sbjct 209 ACTACAGAGGAACCACT-AGACATTTCGAGAAGAAATCTAATCCTGAGTGGAACCAAGT- 266
Query 493 TTT-GCGTTTTC-AAAGGAGAGAATCCAAGCATC-AATCTTGGAGGTTGTAGTTAAAGAC 549
||| || ||||| ||| || || | ||||| || |||||| || | | || || ||
Sbjct 267 TTTCGCCTTTTCTAAA-GATAGGGTACAAGCTTCTTATCTTGAAGCTACT-GTCAAGGAT 324
Query 550 AAAGATGTGGTGT-TGGATGATTTAATTGGTAGAATCATGTTTGATCTT-AATGAGATTC 607
|||||| | || | |||||||| |||||| | | |||||||| || |||||||| |
Sbjct 325 AAAGATTTAGT-TAAAGATGATTTGATTGGTCGTGTTGTGTTTGAT-TTGAATGAGATAC 382
Query 608 CTAAGCGAGTTCCGCCTGATAGTCCATTGGCTCCTCAGTGGTATAGGTTAGAGGAT-CGA 666
||||| ||||||| ||||||||||| || ||||| || |||||||| ||||| ||| ||
Sbjct 383 CTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCCACAATGGTATAGATTAGAAGATGGGA 442
Query 667 CATGGGCGTAAAGTTAAAGGAGAGCTTATGTTAGCTGTTTGGATGGGGACACAAGCCGAT 726
| || | ||||||||||||||||||||||||||||||||| | || || ||||| |||
Sbjct 443 -AAGGCCAAAAAGTTAAAGGAGAGCTTATGTTAGCTGTTTGGTTTGGTACTCAAGCTGAT 501
Query 727 GAAGCTTTCTC-TGATGCTTGGCATTCAGATGCAGCCTCGGTT-G-G-ACCTGAAGGTGT 782
|||||||| || ||| |||||||| || ||||| || | ||| | | | |||| | | |
Sbjct 502 GAAGCTTT-TCCTGAAGCTTGGCACTCTGATGCTGCAACTGTTAGTGGAACTGATGCTTT 560
Query 783 GACGC-AT-ATCCGTTCAAAGGTTTATCTTTCGCCAAAGCTTTGGTATGTGAGGGTCAAT 840
| || | ||| | || ||||||||||| || || |||||||||||| | ||||| |||
Sbjct 561 -A-GCTAACATCAGATCTAAGGTTTATCTCTCTCCTAAGCTTTGGTATCTTAGGGTTAAT 618
Query 841 GTAATTGAGGCTCAAGATTTGATACCTCAT-GATAAAACCA-AGT-TCCCTGAGGT-TTA 896
|| ||||| ||||| ||||||||||| | |||||| | | | ||| ||| || ||
Sbjct 619 GTCATTGAAGCTCAGGATTTGATACCG-AGCGATAAAGGGAGA-TATCC-TGAAGTCTTT 675
Query 897 CGTGAAAGCAATGCTCGGAAACCAGAC-TCTGAGAAC-ACGTATT-TCTCAGACCAAAAC 953
||||||| || | ||||| ||| | | |||| || | | | | || || | || |
Sbjct 676 -GTGAAAGTGATAATGGGAAATCAGGCAT-TGAGGACTA-G-AGTGTCACAAAGCAGGAG 731
Query 954 -ATTGAATCCGATGTGGAATGAAGATCTGATGTTTGTTGTTGCTGAGCCTTTTGAGGAGC 1012
||| ||||||||||||||||| ||| ||||||||||||| |||||||| ||||| ||||
Sbjct 732 TATT-AATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAGCTGAGCCGTTTGAAGAGC 790
Query 1013 CATTGATTCTC-GCGGTGGAAGATAGGGTTGCACCGAACAAAGATGAAA-CGTTAGGCAG 1070
| |||||||| | | |||||||||| ||||| ||||| ||||||||| | || || ||
Sbjct 791 CTTTGATTCTAAGTG-TGGAAGATAGAGTTGCGCCGAATAAAGATGAAGTC-TTGGGGAG 848
Query 1071 GTGTGCAATCCCGTTGCAGAATGTCCA-AAGAAGGTTAGACCATAGGCCGCTTAACT-CG 1128
|| || | ||||||||| || | | || |||||| ||| |||| ||| | ||| |
Sbjct 849 ATGCGCGGTTCCGTTGCAGTATTTGGACAA-AAGGTTTGACTATAGACCGGTGAACAGC- 906
Query 1129 AGGTGGTTCAACCTGGAGAAACATATTATGGTGGAAGGAG-AGA-AA-AAAGAGATCAAA 1185
|||||||| ||||| ||||| ||| |||| ||||||||| ||| || ||||||||||||
Sbjct 907 AGGTGGTTTAACCTTGAGAAGCATGTTATAATGGAAGGAGGAGAGAAGAAAGAGATCAAA 966
Query 1186 TTCGCAAGCAGGATTCATC-TAAGAATCTT-TCTTG-AAGGTGGATACCATGTTCTTGAT 1242
||||| |||| ||| || | | || || || | ||| |||| || || ||||| ||||||
Sbjct 967 TTCGCCAGCAAGATCCA-CATGAGGAT-TTGT-TTGGAAGGAGGGTATCATGTGCTTGAT 1023
Query 1243 GAATCAACTCACTACAGCAGCGACCTAAGGCCAACCGCAAAACAGCTATGGAAACC-AAG 1301
|| || || || ||||| || |||||||| ||||| ||||| || || ||||| || ||
Sbjct 1024 GAGTCTACACATTACAGTAGTGACCTAAGACCAACTGCAAAGCAACTGTGGAAGCCTAA- 1082
Query 1302 CATCGGACTGCTTGAAG-TAGGGATCATAAGTGCGCAC-GGACTGATGCCAATGAA-GAC 1358
|||||| ||||||| | ||||| || ||| |||| || || | ||||| ||||| | |
Sbjct 1083 CATCGGTGTGCTTGA-GCTAGGGGTCTTAAATGCG-ACCGGTTTAATGCCCATGAAAG-C 1139
Query 1359 AAAAGATGG-GA-AGGGGA-CAACAGATGCATATTGTGTGGCTAAGTATGGGCAGAAATG 1415
||||| || | |||||| | || || || ||||||||||| |||||||||||||||||
Sbjct 1140 TAAAGAAGGTGGTAGGGGAACCACGGACGCGTATTGTGTGGCAAAGTATGGGCAGAAATG 1199
Query 1416 GATCAGAACAAGAACAATTGTCGATAGTTTTACGCCTAA-ATGGAACGAGCAGTACACAT 1474
||||||||| | |||||| | || || ||||| || || |||||||||||| || || |
Sbjct 1200 GATCAGAACTCGGACAATTATTGACAGCTTTACCCC-AAGATGGAACGAGCAATATACTT 1258
Query 1475 GGGAAGTGTTTGATACC-TGCACTGTCA-TAACTTTTGGAGCATTCGACAACGG--A-C- 1528
|||| || |||||| || || ||||| | | || |||| | ||||| ||| | | |
Sbjct 1259 GGGAGGTTTTTGAT-CCGTGTACTGT-AGTTACAGTTGGTGTGTTCGATAACTGCCATCT 1316
Query 1529 ACA---T--TC-CAGGA-----GGAAGCGGAAAAGATTTGAGAATCGGGAAAG-TGAGAA 1576
||| | | || | ||| | |||||||||| ||||| || |||| |||| |
Sbjct 1317 ACACGGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGAATTGG-AAAGGTGAGGA 1375
Query 1577 TCCGTCTCTCGACCCTTGAAGCTGACCGTA-TCTACACACATTCATATCCGCTGCTCGT- 1634
| | ||||| || || || ||||| || | ||||||||||||||||||| || | ||
Sbjct 1376 TAAGGCTCTCTACTCTCGAGGCTGATCG-AGTCTACACACATTCATATCCTCTTTTGGTG 1434
Query 1635 CTTTCATCCTTCCGG-GATCAAGAAGACAGGTGAAATACAATTAGCCGTGCGGTTCACTT 1693
|| |||||| || | ||||||| | || || || || ||||| ||| |||| ||||
Sbjct 1435 CTA-CATCCTAGTGGAG-TCAAGAAAATGGGAGAGATTCACTTAGCGGTGAGGTTTACTT 1492
Query 1694 GC-CTATC-TCT-CATCAACATGCT-TCATATGTATTCTCA-GCCAT-TACT-ACCCAAA 1746
|| || || | | | |||||||| | | ||||||||||| | ||| | | || ||| ||
Sbjct 1493 GCTCT-TCAT-TGC-TCAACATGATGT-ATATGTATTCT-ATGCC-TCT-CTTACCTAAG 1545
Query 1747 ATGCATTACATCCA-CCCGTTATCGGTTCTCCAGCTGGACAGCCTGCGACACCAGGCGA- 1804
||||| ||| |||| ||| | | ||||| |||||| || | | | | || || || |
Sbjct 1546 ATGCACTACCTCCATCCCCTCA-CGGTTAGCCAGCTCGATAACTTAAGGCATCAAGCAAC 1604
Query 1805 TGAACATTGTCTCGGCGAGGCTGAAC-CGCGCAGAGCCACCTCTTC-GCAAAGA-GATTG 1861
| | ||||| ||| | ||||| ||| || |||||||| ||| || | ||||| | |||
Sbjct 1605 TCAG-ATTGTGTCGACAAGGCT-AACACGAGCAGAGCCGCCT-TTGAGGAAAGAAG-TTG 1660
Query 1862 TAGAGTACATGCTCGATGTTG-ACTCCCATATGTGGAGCATGAGGAGGAGTAAAGCTAAC 1920
| ||||| ||||| ||||| | | || || |||||||| ||| | || || || || ||
Sbjct 1661 TTGAGTATATGCTTGATGTGGGA-TCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAAT 1719
Query 1921 TTCTTCAGAATCATGA-ATGTTCT-GAGTGGTCTCATTGCTGTTGGAAAATGGTTTGATC 1978
|||||||| || ||| | || || |||||| | || ||||| || ||||||||||| |
Sbjct 1720 TTCTTCAGGATAATGGGA-GT-CTTGAGTGGGATAATCGCTGTAGGGAAATGGTTTGAAC 1777
Query 1979 AGATCTGCA-ACTGGAGAAACCCAATAACCACAATTCTCATTCATGTTCTTTTCATTATC 2037
|||||||| | |||| ||| || ||||| || || | || || |||| |||||||||
Sbjct 1778 AGATCTGCGTA-TGGAAAAATCCGATAACAACGGTTTTAATCCACATTCTCTTCATTATC 1836
Query 2038 -TTAGTTCTCTACCCGGAACTCATCCT-CCCAACGGTTTTCTTGTACCTTTTCTTGATCG 2095
|| ||| ||||||| || |||||| | |||| | ||||| | ||||| |||||||| |
Sbjct 1837 CTT-GTTATCTACCCCGAGCTCATCTTGCCCACCA-TTTTCCTCTACCTCTTCTTGATTG 1894
Query 2096 G-GATCTGGAATT-TCCGGTGGAGACCAAGGCACCCGCCACACATGGACACAAGGT-TGT 2152
| | | ||| | | || | ||||| || || || || ||||||||||||||| | | | |
Sbjct 1895 GAGTT-TGGTACTATC-GCTGGAGGCCGAGACATCCTCCACACATGGACACACG-TCTCT 1951
Query 2153 CCCACGCAGACGCTGTC-CACCCCGATGAGCTTGATGAAGAGTTTGATACTTTCCCAACT 2211
| ||||| ||| | | | ||||| |||||||| || || |||||||| |||||||| |||
Sbjct 1952 CACACGCTGACTCAG-CACACCCTGATGAGCTCGACGAGGAGTTTGACACTTTCCCTACT 2010
Query 2212 TCCCGATCC-TCTGAGATTGTGAGGATGCGATATGACCGGCTCAGAAGCATAGGGGG-AC 2269
|||||| || || || || || |||||| |||||||||| ||||||||||| | || |
Sbjct 2011 TCCCGA-CCATCAGACATCGTCAGGATGAGATATGACCGACTCAGAAGCATTGCTGGTA- 2068
Query 2270 GGGTTCAGACCGT-GATAGGCGATCTAGCGACACAGGGAGAGCGGTTTTTA-TCGCTGCT 2327
|| |||| || || | | || ||||| || || || |||||| | ||| | ||| ||||
Sbjct 2069 GGATTCAAACAGTTGTT-GGTGATCTTGCAACTCAAGGAGAGAGATTTC-AGTCGTTGCT 2126
Query 2328 GAGCTGGCGAGACCCGAGGGCAACCACAT-TGTTTGTGCTC-TTCTGTCTCATAGCTGCT 2385
|||||||| |||||| | || || | | | || || || |||||||| ||||||||
Sbjct 2127 AAGCTGGCGTGACCCGCGTGCCACTGC-TCTCTTCGT-CTTGTTCTGTCTGATAGCTGC- 2183
Query 2386 ATCGTG-TTGTATGT-TA-CACCGTTTCAGGTTGTTGCACTTCTTGC--TGGGATC-TAT 2439
| ||| || ||| | || | || || |||||||| || || |||| | || | |||
Sbjct 2184 A--GTGATTTTATATATAACTCCCTTCCAGGTTGTGGC--TT-TTGCCATTGGCTTGTAT 2238
Query 2440 GTGCTGAGGCATCCAAGGTTCAGGCACAAGCTACCC-TCTGTGCCGCTCAATCT-CTTCA 2497
||||| || || || ||| ||||| ||||||| ||| || || || || || || |||||
Sbjct 2239 GTGCTTAGACACCCGAGGCTCAGGTACAAGCT-CCCATCAGTTCCACTTAA-CTTCTTCA 2296
Query 2498 GGAGGCTACCTGCAAGATCTGA 2519
||||||| || |||||| ||||
Sbjct 2297 GGAGGCTTCCAGCAAGAACTGA 2318
> AT4G11610.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr4:7013729-7018049
REVERSE LENGTH=3466
Length=3466
Score = 285 bits (154), Expect = 1e-75
Identities = 1430/2018 (71%), Gaps = 199/2018 (10%)
Strand=Plus/Plus
Query 405 TGATCCATAT-GTGGAAGTGA-AGCTCGGAAACTACAGAGGGATGACTAAG-CATTTTGA 461
|||||||| | || || |||| || | || ||||||| ||| || || ||| ||||||||
Sbjct 1100 TGATCCAT-TCGTCGAGGTGAGAG-TGGGGAACTACAAAGGAATCAC-AAGACATTTTGA 1156
Query 462 GAAGAAGTCGA-ATCCGGAGTGGAAGCAAGTGTTTGCGTTTTC-AAAGGAGAGAATCCAA 519
|||| || | | ||||||| ||||| ||||||||||| || | ||| ||| |||| |||
Sbjct 1157 GAAG-AGACAACATCCGGAATGGAACCAAGTGTTTGCATTCGCGAAA-GAGCGAATGCAA 1214
Query 520 GCATCAATCTTGGAGGTTGTAGTTAAAGACAAAGATGTGGTGTTGGATGATTTAAT-T-- 576
|| || | ||||| || || ||||| ||||||||| | | || || || || |
Sbjct 1215 GCCTCGGTGTTGGAAGTAGTGGTTAAGGACAAAGATCTTTTAAAAGACGA-TT-ATGTCG 1272
Query 577 GG-TAGAATCATGTTTGATC-TTAATGA-GATTCCTAAGCGAGTTCCGCCTGATAGTCCA 633
|| | | | | |||||| | ||||||| | | ||| || || || || || || ||
Sbjct 1273 GGTTTG--TTAGGTTTGA-CATTAATGATG-TCCCTCTTCGTGTGCCACCAGACAG-CCC 1327
Query 634 T-TGGCTCCTCAGTGGTATAGGTTAGAGGATCGACATGGGCGTA-AAG-TTAAAGGAGAG 690
| | ||||| || |||||||| |||||||| | | | || | | ||| | ||||| |||
Sbjct 1328 TCTTGCTCCGCAATGGTATAGATTAGAGGA-CAAGAAAGGAG-AGAAGATCAAAGGTGAG 1385
Query 691 CTTATG-TTAGCTGTTTGGATGGGGACACAAGCCGATGAAGCTTTCTCTGATGCTTGGCA 749
|||||| || ||||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1386 CTTATGCTT-GCTGTTTGGATCGGTACACAAGCTGATGAAGCTTTCTCTGATGCTTGGCA 1444
Query 750 TTCAGATGCAGCC-T-CG-GTTG---GACCTGAAGGTGTGAC-GCA-TA-TCCGTTCAAA 800
||| ||||| || | | |||| | || || | | | || | |||| |||||
Sbjct 1445 TTCTGATGCTGCAATGCCCGTTGATTGTTCTCCAGCTATCTCCGCCGTTCTCCGCTCAAA 1504
Query 801 GGTTTATCTTTCGCCAAAG-CTTTGGTATGTGAGGGTCAATGTAATTGAGGCTCAAGATT 859
||| |||| | |||| | || ||||| || | || || || || || || ||||| |
Sbjct 1505 GGTCTATCATGCGCCTC-GTCTATGGTACGTCCGTGTGAACGTGATCGAAGCACAAGACT 1563
Query 860 TGATACCT-CATGATAAAACCAAGTTCCCTGAGGTTTACGTGAAAGCA-ATGCTCGGAAA 917
|||| || || || ||||| | ||||||||| |||||||| || || | ||| |||||
Sbjct 1564 TGATTCCGACA-GACAAAACTAGGTTCCCTGATGTTTACGTCAAGGCGCA-GCTAGGAAA 1621
Query 918 CCAGACTC-TGA-GAACA--CGTATTTCTCA-GAC-CAAAACATTGAAT-CCGATGTGGA 970
||| | || ||| || || | || | || | | | || | ||| | ||| | ||||
Sbjct 1622 CCA-AGTCATGAAGACCAGACC-ATG-C-CAAG-CTCGAACCCTTGG-TGCCG-TATGGA 1674
Query 971 ATGAAGATCTGAT-GTTTGTTGTTGCTGAGCCTTTTGAGGAGCCATTGA-TTCTCGCGGT 1028
| ||||| || | |||||||||||| ||||| ||||| || ||||| | ||||| | ||
Sbjct 1675 ACGAAGA-CTTTTTGTTTGTTGTTGCGGAGCCATTTGAAGA-CCATTTAGTTCTCACCGT 1732
Query 1029 GGAAGATAGGGTTGCACCGAACAAAG-ATGA-A-ACGTTAGG-CAGGTG-TG-CAATCCC 1082
|| || ||||||| || | |||| | || | | ||| || | | | | || |||
Sbjct 1733 CGAGGACCGGGTTGCTCC-AGGAAAGGACGAGATA-GTT-GGTC-G-TACTTACATTCCT 1787
Query 1083 GTTGCAGAATGTCCA-AAGA-AGGTTA-GACCATAGGCCGCTTAACTCGAGGTGGT-TCA 1138
||| | | || | ||| || | | || |||| | | | | ||| |||| | |
Sbjct 1788 -TTGAACACGGTAGAGAAGCGAGCTGATGATCATATGATACATG-CGCGA--TGGTAT-A 1842
Query 1139 ACCTGGAGAAACATATTATGGTGGAAG-G-AG-AGAAAAA-AGAGATCAAATTCGCAA-G 1193
| ||||||| || |||| || || | | | || || ||||| |||||| | | |
Sbjct 1843 ATCTGGAGAGACCGGTTATTGTAGATGTGGATCAGCTCAAGAGAGAA-AAATTCTCTATG 1901
Query 1194 CAGGATTCATCTAAGAATCTT-TCTTGAAGGTGGATACCATGTTCTTG-ATGAATCAACT 1251
||||||||||| || | || ||||||||| |||||||||||| ||| |||| ||||||
Sbjct 1902 -AGGATTCATCTGCGAGT-TTGTCTTGAAGGAGGATACCATGTT-TTGGATGAGTCAACT 1958
Query 1252 CACTACAGCAGCGACCTAAGGCCAACCGCAAAAC-AGCTATGGAAACCAAGC-ATCGGAC 1309
|| ||||||||||| || | ||| |||| | || | || |||| || || | ||||||
Sbjct 1959 CATTACAGCAGCGATCTCCGCCCATCCGCTAGACCA-CTCTGGAGAC-AACCGATCGGAG 2016
Query 1310 TGCTTGAAG-TAGGGATCATAAGTGC-GCACGGACTG-ATGCCAATGAAGACAAAAGATG 1366
| ||||| | | |||||| ||| || | ||||| | |||||||| || | ||| |
Sbjct 2017 TTCTTGA-GCTCGGGATCTTAAACGCTGTT-GGACTTCAC-CCAATGAAAACTAGAGAAG 2073
Query 1367 GGAAGGGGA-CAACAGATGCATATTGTGT-GGCTAAGTATGGGCAGAAA-TGGATCAGAA 1423
| | | ||| | | || | | ||| || || || ||||| || ||| ||| | ||||
Sbjct 2074 GCA-GAGGAACCTCTGACACTTTTTGCGTTGGGAAA-TATGGACA-AAAGTGGGTTAGAA 2130
Query 1424 CAAGAACAATTGTCGATAG-TT-T-TACGCCTAAATGGAACGAGCAGTACACATGGGAAG 1480
|||| ||||| || |||| || | | | || || | ||||||||||| ||||||||||
Sbjct 2131 CAAGGACAATGGTGGATAACTTGTGT-C-CC-AAGTATAACGAGCAGTATACATGGGAAG 2187
Query 1481 TGTTTGATACCTGC-ACTGTCATAACTTTTGGAGCATTCGACAACGGACA-CATTCCAGG 1538
| ||||| || || || || |||| |||| | || || |||||||| | | |||
Sbjct 2188 TCTTTGAC-CCAGCGACGGTTTTAACCGTTGGTGTGTTTGATAACGGACAGC-T---AGG 2242
Query 1539 AGGAAGCGGAAA-AGAT-T-TGA-GAATCGGGAA-AGTGAGAATCCG-TCTCTCGACCCT 1592
| || ||||| ||| | ||| || | ||||| | | | || | | | || || |
Sbjct 2243 TGAAAAAGGAAATAGAGATGTGAAGATT-GGGAAGATTC-GTATAAGGT-TATCTACT-T 2298
Query 1593 T-GA-AGCTG-ACCGTATCTACACACATTCATATCCGCTGCTCGT-CTTTCATCCTTCCG 1648
| || | ||| || | |||||||||||||| || ||||| || || ||| || ||| | |
Sbjct 2299 TAGAGA-CTGGACGG-ATCTACACACATTCTTACCCGCTACTTGTTCTT-CACCCTACTG 2355
Query 1649 GGATCAAGAAGACAGGTGAAATACA-ATTAGCCGTGCGGTTCACTTGCCTATCTC-T-CA 1705
|| | ||||| | || || |||| || |||||| ||||||| ||| ||||| | |
Sbjct 2356 GGGTGAAGAAAATGGGCGAGCTACATATG-GCCGTGAGGTTCACATGC--ATCTCGTTCG 2412
Query 1706 TCAA-CATGCTTCATATGTATTCTCAG--CCA-TTACTACCCAAAATGCATTACATCC-A 1760
||| ||||||| || || |||| ||| || | || ||||||||||| | |
Sbjct 2413 -CAAACATGCTT--TACCAATACTCAAAACCACTTT-TGCCTAAAATGCATTATGTTAGA 2468
Query 1761 CCCGTTATCGGTTCTCCAGCTGGACA-GCCTGCGACACCAGGCGATGAACATTGTCTCGG 1819
|| ||| || || | |||| ||||| || | ||||| || ||| |||| || || | |
Sbjct 2469 CC-GTTTTCAGTAATGCAGCAGGACATGCTT-CGACATCAAGCGGTGAATATAGTGGCTG 2526
Query 1820 CGAGGCT-GA-ACCGCGCAGAGCCACCTCTTCGCAAAGAGATTGTAGAGTACATGCTCG- 1876
|| || | | | | |||||||| || || | |||||||| | |||| ||| |||
Sbjct 2527 CGCGGTTAGGTA--GAGCAGAGCCTCCCCTGAGGAAAGAGATCATTGAGTTTATG-TCGG 2583
Query 1877 ATGTTGACTCCCATATGTGGAGCATGAGGAGGAGTAAAGCTAACTTCTTCAGAATCATGA 1936
| || || ||| ||||||| ||| | | ||| |||||||| |||||| | || ||||
Sbjct 2584 ACACGGATTCGCATTTGTGGAGTATGCGTAAGAGCAAAGCTAATTTCTTCCGGATGATGA 2643
Query 1937 -A-TGTTCTGAG-TGGTCTCATTGCTGTTGGAAAATGGTT-T-G-ATCAGATCTGCAAC- 1989
| | |||| | || | | || || |||||||||||||| | | | || | ||| |
Sbjct 2644 CAGTTTTCTCCGGTG-T-T-ATCGCGGTTGGAAAATGGTTCTCGGA-CAT-T-TGCT-CG 2696
Query 1990 TGGAGAAACCCAATAACCACAATTCTCATTCATGTTCT-TTTCATT-AT-CTTAGTTC-T 2045
||| ||||||| || || || |||| |||||||||| ||| || || ||| ||| |
Sbjct 2697 TGGCGAAACCCGATCACGACCGTTCTTGTTCATGTTCTGTTT--TTGATGCTT-GTTTGT 2753
Query 2046 CTACCCGGAACTCATCCTCCCAACGGT-TTTCTTGTACCT-TTTCTTGATCGGGATCTGG 2103
|| ||| ||||| ||| | ||||| | ||||| ||| | ||| ||||||||| |||||
Sbjct 2754 CT-CCCAGAACTGATCTTACCAACAATGTTTCTC-TACATGTTT-TTGATCGGGCTCTGG 2810
Query 2104 AATTTCCGGTGGAGACCAAGGCACCCGCCACACATGGACACAAGGTTGTCCCACGCAGAC 2163
|| | ||||| |||||| | | || ||||||||| |||||| | || || || ||
Sbjct 2811 AACTACCGGTTTAGACCACGTTATCCACCACACATGAACACAAAAATCTCTCAAGCCGAG 2870
Query 2164 GCTGTCCACCCCGATGAGCTTGATGAAGAGTTTGATAC-TTTCCCAACTTCCCGAT-CCT 2221
|| ||||| || || ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 2871 GCGGTCCATCCAGACGAGCTTGATGAAGAGTTTGATACGTTTCC-AACCACTAGAAACC- 2928
Query 2222 CTGAGATTGTGAGGATGCGATATGACCGGCTCAGAAGCATAGG--GGGACGGGTTCAGAC 2279
|||| || ||| | | | ||||||||||| |||||| | || |||| || |||||||
Sbjct 2929 CTGACATGGTGCGTTTAAGGTATGACCGGCTTAGAAGCGT-GGCCGGGA-GGATTCAGAC 2986
Query 2280 CGTGATAGGCGATCTAGCGACACAGGGAGAGCGGTTTT 2317
|||||| || ||||| || ||||| ||||| || ||||
Sbjct 2987 CGTGATCGGAGATCTTGCAACACAAGGAGAACG-TTTT 3023
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125818693044
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5