BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488135
Length=2115
Score E
Sequences producing significant alignments: (Bits) Value
AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP... 2669 0.0
AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP... 1162 0.0
> AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:4214504-4216686 FORWARD LENGTH=2183
Length=2183
Score = 2669 bits (1445), Expect = 0.0
Identities = 1879/2080 (90%), Gaps = 64/2080 (3%)
Strand=Plus/Plus
Query 1 TCATCTATCACTTCTAATTTCTAAACAA-AAACCATGCCTCCTTCTCCGT-TGCTTGGTC 58
|||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||
Sbjct 30 TCATCTATCACTTCTAATTTCTAAACAACAAACCATGTCTCCTTCTCC-TCTGCTTGGTC 88
Query 59 CACCAGAGCTCAGAGATCCCAACTCTCTCCTCCCAAAACCCATCACACCTTCCGGTCCCA 118
|||| ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 89 CACCTGAGCTCAGAGATCCCAACTCTCTCCTCCCAAAACCCACCACAACTTCTGGTCCCA 148
Query 119 GCAACCCTTTCATGGACGCTATGGTCTCAAATTTCAACAACTCAACTAGAGTCAACGTCA 178
|| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
Sbjct 149 GCGACCCTTTCATGGACGCTATGGTTTCAAATTTCAACAACTCAGCTAGAGTCAACAACG 208
Query 179 TC-TCTTCTCCTCCCATGGGCTACACCGAGAACAATTCCGCCACGCACCTCTCCTCAGGC 237
|| | |||||||| ||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 209 TCAAC-TCTCCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGC 267
Query 238 AACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAAGACTCTCTGGAG 297
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 268 AACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAACACTCTCTCGAG 327
Query 298 CAGTGGCTACAGGGAGCTTGGGACCACGACGCCTTGACCACTCTCAAGCTTATCTGTAAC 357
|||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 328 CAGTGGTTACAAGGTGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAAT 387
Query 358 CTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 CTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTA 447
Query 418 TGGCTCCATGGTTGTCATCCCAAAACTCTAGCTTGTAACCTCGAGTCCCTCTCTCAATTT 477
|||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||
Sbjct 448 TGGCTCCATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTCAATTT 507
Query 478 GGATACTTTAAAGATTTCCCAGAGATTCTTTACCGGATTCTTCAAGGATCTGACATCAGG 537
||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||| ||
Sbjct 508 GGATACTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGG 567
Query 538 AAGATCCAGAAATCAGAAAGGTTCAGGAGGAAAACTGAAGCATCTCGAGGTAGAAGAGCT 597
||||||||||||||||||||||||| |||||||| |||||| ||| || ||||||||||
Sbjct 568 AAGATCCAGAAATCAGAAAGGTTCAAGAGGAAAAGTGAAGC-TCT--AGATAGAAGAGCT 624
Query 598 CCTTTCTATCCCAATCACTCGGGTGTCTCATATGGTGGTCGTCCTTATGGTGGTCGTGGA 657
|| | ||| || || | | | ||| |||||||| ||||||||||||||||
Sbjct 625 CC--T-TAT---GAT-GGTC--AT-TGT--TATCATGGTCGTCTTTATGGTGGTCGTGGA 672
Query 658 CGTGGATCCGGTCGCCGCGGTGGTAAAAGGAAGCCAGTGGCCACAAGGGAGCTGAGAGTA 717
|||||||| |||||| | || ||||||||||||||||||| || |||| | ||||||||
Sbjct 673 CGTGGATCTAGTCGCCCCAGTAGTAAAAGGAAGCCAGTGGCGACGAGGGCGTTGAGAGTA 732
Query 718 GCCAACGCAGAGAGGAAGAACCAAGCGGAGAAAGCCAGAGCAAGCTTGGATCGCAAGAAA 777
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct 733 GCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCAAGCTTGGATCGGAAGAAA 792
Query 778 AAGAAGGTTTCAATGGGGAAGGACGCGTTTACAAGATATTCTCATGATCCAGACTATCGG 837
||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 793 AAGAAGGTTTCGATGGGGAAGGACGCGTTTACAAGATATTCTTGCGATCCAGACTATAGA 852
Query 838 TATCTCCACGAACGCGTCTCTGATCTATTCGCAAATCGA-CTAAAGAGAGATCTTGAGTT 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 853 TATCTCCACGAACGCGTCTCTGATCTATTCGCAAATC-AGCTAAAGAAAGATCTTGAGTT 911
Query 897 TTTGACATCCGACCAAA-CAAACCAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTG 955
||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 912 TTTGACATCGGA-CAAACCAAACGAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTG 970
Query 956 ATTCTTCGTTTGACAAAACAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTCCTC 1015
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 971 ACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTACTC 1030
Query 1016 GAGAATCATTCCCTGAATACGAAGGCGTTG-ACGAAGCTCACTATGCCTACAGAGTTCGT 1074
|||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||
Sbjct 1031 GAGAATCATTCCCTGAATACGAAGGCGTTGTA-GAAGCTCACTATGCATACAGAGTTCGT 1089
Query 1075 GATCGTCTAAGGAAAGAAGTTCTTGTTCCTCTGCGGAAAACTCTGCAACTCCCTGAAGTA 1134
||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1090 GATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACTCTGCAACTGCCTGAAGTA 1149
Query 1135 TACATGGGAGCGAGAAACTGGGATACTCTTCCGTACAACCGTGTAGCATCAGTGGCAATG 1194
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1150 TATATGGGAGCGAGAAACTGGGATATTCTTCCGTACAACCGTGTAGCATCAGTGGCGATG 1209
Query 1195 AAGACGTACAAGGATATATTCTTGAATCACGACGCAGAGAGGTTTCAACAATACCTTGAC 1254
||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 1210 AAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGAGAGGTTTCAGCAATATCTTGAC 1269
Query 1255 GATGCAAAGACGGGTAAAACCAAGGTAGCTGCCGGTGCTGTGTTACCTCACGAGATAATC 1314
||||||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct 1270 GATGCAAAGGCGGGGAAAACCAAGGTAGCTGCTGGTGCTGTGTTGCCTCATGAGATAATC 1329
Query 1315 AGAGATTTAGACGGTGGAGACGGTGGACAAGTAGCTGAGCTGCAATGGAA-ACGAACGGT 1373
||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct 1330 AGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGAGCTGCAATGGAAGA-GAACGGT 1388
Query 1374 GGATGATCTGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTATCTGTGACGTTTCAGG 1433
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1389 AGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTGTCTGTGACGTTTCAGG 1448
Query 1434 GTCTATGGATGGTGATCCAATGGAGGTTTCAGTCGCTTTGGGTCTGCTAGTCTCAGAGTT 1493
||||||| ||||||| ||||||||||||| || |||||||||||||||||||| ||| |
Sbjct 1449 GTCTATGAATGGTGAACCAATGGAGGTTTGTGTGGCTTTGGGTCTGCTAGTCTCTGAGCT 1508
Query 1494 ATCTGAAGAGCCATGGAGAGGAAAGCTTATAACTTTCAGCCAAAACCCGGAGATGCATTT 1553
||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||
Sbjct 1509 ATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTCAGCCAAAATCCGGAGTTGCATTT 1568
Query 1554 GGTGACAGGAGACGACT-TGAGA-TCAAAATCAGAGTTTGTGAGGAATATGCAATGGGGA 1611
||||| ||||||||| | || | |||||| |||||||||| | || |||||||||||
Sbjct 1569 GGTGAAAGGAGACGA-TCTG-TACTCAAAAACAGAGTTTGTTAAAAAAATGCAATGGGGT 1626
Query 1612 ATGAACACTGATTTTCAGAAAGTGTTTGACTTGATTC-TGAGAGTTGCGGTAGAAGGGAA 1670
||||||||||||||||||||||||||||| ||||||| || |||| || ||| ||| |||
Sbjct 1627 ATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTG-GAGTGGCCGTACAAGAGAA 1685
Query 1671 GCTGAAACCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTTGATCA 1730
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1686 GCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTTGATCA 1745
Query 1731 AGCGTC-T--TCGTC-CA--AT--A---C-A---TATGGA-----A-GGCAGTCT--AGG 1767
|||| | | ||||| || || | | | |||| | | ||||| || | |
Sbjct 1746 AGCGGCGTCGTCGTCACATTATTCAAGACCAGGCTATGCATTTTTAAGGCAGCCTCCAAG 1805
Query 1768 -AGT--AA-T---GGATGGGAAACTGATTATGAGGTGATTGTGAGGAAGTATAGGCAGAA 1820
| | || | ||||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct 1806 TAATCCAAGTAATGGATGGGAAACGGATTATGAAGTGATTGTGAGGAAGTATAAACAGAA 1865
Query 1821 TGGGTATGGAGAAGTTGTGCCGGATATAGTGTTTTGGAACTTGAGGGATTCAAGAGCAAC 1880
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1866 TGGGTATGGAGACGTTGTGCCGGAGATAGTGTTTTGGAACTTGAGGGATTCGAGAGCAAC 1925
Query 1881 GCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTCGAAGAATTTGAT 1940
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1926 GCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTGAGTGGCTTTTCGAAGAATTTGAT 1985
Query 1941 GAAAATGTTTTTGGAGCATGATGGAGAGATTGATCCTATGATGATGATGGAGGCTGCAAT 2000
||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct 1986 GAAAATGTTTTTGGAACATGATGGAGAGATTGATCCTGTGATGATGATGGAGACTGCTAT 2045
Query 2001 TTCTAAAGATGAGTATAAGTCGCTTGTTATAGTTGATTAA 2040
|||||||||||||||||||||||||||| | |||||||||
Sbjct 2046 TTCTAAAGATGAGTATAAGTCGCTTGTTGTTGTTGATTAA 2085
> AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr3:9049446-9051593 FORWARD LENGTH=2148
Length=2148
Score = 1162 bits (629), Expect = 0.0
Identities = 913/1050 (87%), Gaps = 20/1050 (2%)
Strand=Plus/Plus
Query 697 GCCACAAGGGAGCTGAGAGTAGCCAACGCAGAGAGGAAGAACCAAGCGGAGAAAGCCAGA 756
||||| |||||||| || ||||| ||||| |||||||||||||||| |||||||||||||
Sbjct 805 GCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 864
Query 757 GCAAGCTTGGATCGCAAGAAAAAGAAGGTTTCAATGGGGAAGGAC-GCGTTTAC-AAGAT 814
||||||||| | |||||| |||||||||||||||||| ||||| | || | ||| ||| |
Sbjct 865 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAAGG-CTGCATCTACAAAG-T 922
Query 815 ATTCTCATGATCCAGACTATCGGTATCTCCACGAACGCGTCTCTGATCTATTCGCAAATC 874
||||| | |||||| ||||| ||| |||||||||||| |||||||| |||||||||||||
Sbjct 923 ATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCAAATC 982
Query 875 GACTAAAGAGAGATCTTGAGTTTTTGACATCCGACCAAACAAACCAAATCTCTCTTGCTG 934
|||||||||||| ||||||||||||||||||| |||| ||||| |||||||||| || |
Sbjct 983 AACTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAAAATCTCTCTAGCGG 1042
Query 935 CTAAATGGTGTCCATCGCTTGATTCTTCGTTTGACAAAACAACTCTTCTCTGCGAGAGCA 994
|||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||
Sbjct 1043 CTAAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCGAGAGCA 1102
Query 995 TTGCTAGGAAGATCTTTCCTCGAGAATCATTCCCTGAATACGAAGGCGTTGACGAAGCTC 1054
| ||||||||||||||||| | |||||||||||| |||||||||||||| || || ||||
Sbjct 1103 TAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTC 1162
Query 1055 ACTATGCCTACAGAGTTCGTGATCGTCTAAGGAAAGAAGTTCTTGTTCCTCTGCGGAAAA 1114
||||||| |||||||||||||| || ||||||||| |||| ||||||||||| ||||| |
Sbjct 1163 ACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCCGGAAGA 1222
Query 1115 CTCTGCAACTCCCTGAAGTATACATGGGAGCGAGAAAC-TGG-GATACTCTTCCGTACAA 1172
||||||||||||||||||||||||||||||| || | | ||| || |||| || || ||
Sbjct 1223 CTCTGCAACTCCCTGAAGTATACATGGGAGCTAG-AGCTTGGCAAT-CTCTCCCTTATAA 1280
Query 1173 CCGTGTAGCATCAGTGGCAATGAAGACGTACAAGGATATATTCTTGAATCACGACGCAGA 1232
|||||| ||||||||||| |||||| | |||||||| | |||||| ||| |||| | |
Sbjct 1281 CCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGACGAAAA 1340
Query 1233 GAGGTTTCAACAATACCTTGACGATGCAAAGACGGGTAAAACCAAGGTAGCTGCCGGTGC 1292
||||||||| ||||| ||| ||||||| |||||||| ||||| ||| |||| ||||||||
Sbjct 1341 GAGGTTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCCGGTGC 1400
Query 1293 TGTGTTACCTCACGAGATAATCAGAGATTTAGACGGTGGAGACGGTGGACAA-GTAGCTG 1351
||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| || ||||
Sbjct 1401 TGTGTTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGG-CAAAGTCGCTG 1459
Query 1352 AGCTGCAATGGAAACGAACGGTGGATGATCTGAAAGAGAAAGGTTCTTTGAGGAATTGTA 1411
|||||||||||||||||| ||| || || || ||||||||||||||||||| || || |
Sbjct 1460 AGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCA 1519
Query 1412 TAGCTATCTGTGACGTTTCAGGG-TCTATGGATGGTGATCCAATGGAGGTTTCAGTCGCT 1470
| ||||| ||||||||||| ||| |||||| ||||||| ||||||||||||||||||||
Sbjct 1520 TGGCTATATGTGACGTTTC-GGGATCTATGAATGGTGAGCCAATGGAGGTTTCAGTCGCC 1578
Query 1471 -TTGGGTCTGCTAGTCTCAGAGTTATCTGAAGAGCCATGGAGAGGAAAGCTTATAACTTT 1529
|||| | |||||||||| ||| |||| ||||||||||||| ||||||||||||||| ||
Sbjct 1579 CTTGGAT-TGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATT 1637
Query 1530 CAGCCAAAACCCGGAGA-TGCATTTGGTGACAGGAGACGACTTGAGATCAAAATCAGAGT 1588
||| |||| || || | |||||||||||| ||||||||| |||||||||||| ||||||
Sbjct 1638 CAGACAAAGTCCTGA-ACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAGAGT 1696
Query 1589 TTGTG-AGGAATATGCAATGGGGA-ATGAACACTGATTTTCAGAAAGTGTTTGACTTGAT 1646
||||| || | |||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 1697 TTGTGGAG-AGCATGCAATGGG-ATATGAACACTGATTTTCAGAAAGTGTTTGATTTGAT 1754
Query 1647 TCTGAGAGTTGCGGTAGAAGGGAAGCTGAAACCGGAAGAGATGATCAAGAGGGTGTTTGT 1706
||| | ||| || || ||| | ||||| || ||| |||| ||||||||||||||||||||
Sbjct 1755 TCTTAAAGTGGCCGTGGAAAGCAAGCTTAAGCCGCAAGACATGATCAAGAGGGTGTTTGT 1814
Query 1707 GTTCAGTGATATGGAGTTTGATCAAGCGTC 1736
||||||||| |||||||||||| |||||||
Sbjct 1815 GTTCAGTGACATGGAGTTTGATGAAGCGTC 1844
Score = 407 bits (220), Expect = 2e-112
Identities = 333/386 (86%), Gaps = 14/386 (4%)
Strand=Plus/Plus
Query 181 TCTTCTCCTCCCATGGGCTACACCGAGAACA-ATTCCGCCACGC-ACCTCTCCTCAGGCA 238
||||| ||| | ||||||||||| ||||| | | |||||||| | ||||||||||||| |
Sbjct 316 TCTTCACCTGCGATGGGCTACACTGAGAATAGA-TCCGCCAC-CTACCTCTCCTCAGGTA 373
Query 239 ACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAAG-ACTCTCTGGAG 297
|||||||||||||||||||||| ||| ||||||| |||||| ||| | |||||||||
Sbjct 374 ACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTCCACGCC-CAAGAAATCTCTGGAG 432
Query 298 CAGTGGCTACAGGGA-GCTTGGGACCACGACGCCTTGACCACTCTCAAGCTTATCTGTAA 356
||| ||||| | ||| ||||||||||| || | || |||||||||||||||||||||||
Sbjct 433 CAGCGGCTAGA-GGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAA 491
Query 357 CCTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTT 416
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||
Sbjct 492 CCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTT 551
Query 417 ATGGCTCCATGGTTGTCATCCCAAAACTCTAGCTTGTAACCTCGAGTCCCTCTCTCAA-T 475
|||||||||||| | ||||||||||| |||||||||||||||||||| ||||| ||| |
Sbjct 552 GTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTCTC-CAAAT 610
Query 476 TTGGATACTTTAAAGATTTCCCAGAGATTCTTTACCGGATTCTTCAAGGATCTGACATCA 535
|||| || ||||||||||| || |||||||||||||||||||| |||||| |||| |||
Sbjct 611 TTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGACCTGAAATCC 670
Query 536 GGAAG-ATCCAGAAATCAG-AAAGGT 559
| | | || |||||| | | ||||||
Sbjct 671 GCA-GTATACAGAAAAC-GCAAAGGT 694
Score = 165 bits (89), Expect = 2e-39
Identities = 134/155 (86%), Gaps = 6/155 (4%)
Strand=Plus/Plus
Query 1777 TGGGAAACTGATTATGAGGTGATTGTGAGGAAGTATAG-GCAGAATGGGTATGGAGAAGT 1835
||| |||| ||||| ||||||||||||| |||||||| | |||| ||||| ||||| |
Sbjct 1954 TGGCAAACGGATTACAAGGTGATTGTGAGAAAGTATAGAG-AGAAAGGGTACGGAGAGGC 2012
Query 1836 TGTGCCGGATATAGTGTTTTGGAACT-TGAGGGATTCAAGAG-CAACGCCGGTGCCGGGA 1893
||||||||| || ||||||||||| | |||||||||| || | ||||||| |||| |||
Sbjct 2013 TGTGCCGGAGATTGTGTTTTGGAA-TCTGAGGGATTCGAG-GTCAACGCCTGTGCTTGGA 2070
Query 1894 AACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTC 1928
|||||||||||||||||||||||||||||||||||
Sbjct 2071 AACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTC 2105
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104868938505
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5