BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488150
Length=1942
Score E
Sequences producing significant alignments: (Bits) Value
AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-respons... 3016 0.0
AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein |... 1181 0.0
> AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | Auxin-responsive
GH3 family protein | chr5:4267510-4271051 FORWARD LENGTH=1976
Length=1976
Score = 3016 bits (1633), Expect = 0.0
Identities = 1854/1958 (95%), Gaps = 25/1958 (1%)
Strand=Plus/Plus
Query 1 AATGCAGTTTCACAAATTTCCAAATCCTTTG----T-AATTGAGTGTATCAATCTGGAGA 55
|||||| ||||| |||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 1 AATGCAATTTCAAAAATTTCCAAATCCTTTGTAATTAAATTGAGTGTACCAATCTGGAGA 60
Query 56 GAAGAAACGAGACTCTATTGCAGAGAACCAAATATGAAGCCAATCTCCGATATCAACGAA 115
|||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 61 AAAGATACGAGACTCTGTTGCAGAGAACCAAATATGAAGCCAATCTTCGATATCAACGAA 120
Query 116 AGTTTTGAGAAGCAGCTGAAGTATTTAACTTCAGATGTGAAG-CAAATACAAGACAACTT 174
| ||||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||
Sbjct 121 ACTTTTGAGAAGCAGCTGAAGGATTTAACTTCAAATGTGAAGTC-TATACAAGACAACTT 179
Query 175 GTTAGAGGAGATAATCACACCCAACACCAAAACAGAGTACCTCCAACGTTTTCTCATCGA 234
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GTTAGAGGAGATCATCACACCCAACACCAAAACAGAGTACCTCCAACGTTTTCTCATCGA 239
Query 235 TAGGTTCGATAAAGATCTCTTCAAGAAAAACGTACCGATCGTGACATATGAAGATATTAA 294
||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 240 TAGGTTCGACAAAGAGCTCTTCAAGAAAAACGTACCGATCGTGTCATATGAAGATATTAA 299
Query 295 GCCTTATCTGGATCGTGTCGTTAATGGAGAGTCATCCGATGTTATATCGGCTCGACCTAT 354
||||||||| || |||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 300 GCCTTATCTCGACCGTGTCGTTAATGGAGAGTCATCCGATGTTATATCGGCCCGAACTAT 359
Query 355 TACCGGTTTCTTGCTAAGTTCGGGAACTTCTGGGGGAGCACAAAAGATGATGCCATGGAA 414
|| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 360 CACTGGATTCTTGCTAAGTTCTGGAACTTCTGGAGGAGCACAAAAGATGATGCCATGGAA 419
Query 415 CAACAAGTACTTGGACAATTTGACTTTCATCTACGATCTTCGTATGCAAGTTATAACCAA 474
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 420 CAACAAGTACTTGGACAATTTGACATTCATCTACGATCTTCGTATGCAAGTTATAACCAA 479
Query 475 GCATGTGGAAGGTGTGGAAGAAGGAAAAGGGATGATGTTTCTCTTT-ACTAAACAAGAAT 533
||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 480 GCATGTGAAAGGTGTGGAAGAAGGAAAAGGGATGATGTTTCT-TTTCACTAAACAAGAAT 538
Query 534 CCATGACTCCTTCTGGCTTGCCTGCTCGAGTCGCAACCAGCAGCTATTTGAAGAGTGACT 593
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 539 CCATGACTCCTTCTGGCTTGCCTGCTCGAGTCGCAACCAGCAGCTATTTCAAGAGTGACT 598
Query 594 ATTTCAAGCACCGGCCATCGAACTGGTACTACTCGTACACGAGCCCTGATGAAGTCATCT 653
|||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 599 ATTTCAAGAACCGTCCATCGAACTGGTATTACTCGTACACCAGCCCTGATGAAGTCATCT 658
Query 654 TATGCCCTAACAACACCCAAAGTCTGTACTGCCATTTGCTCTGTGGCTTAGTCCAAAGAG 713
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 659 TATGCCCTAACAACACCGAAAGTCTATACTGCCATTTGCTCTGTGGCTTAGTCCAAAGAG 718
Query 714 AAGAGGTTGTGAGAACGGGTTCCATCTTTGCTTCGGTCATGGTCCGAGCTATCGAGGTTC 773
| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 719 ACGAGGTTGTGAGGACGGGTTCCATCTTTGCTTCAGTCATGGTCCGAGCTATCGAGGTCC 778
Query 774 TTAAGAATTCTTGGGTGGAGTTGTGTTCAAACATCCGATCGGGCCATCTCAGCAACTGGG 833
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 779 TTAAGAATTCTTGGGAGGAGTTGTGTTCAAACATCCGATCGGGCCATCTCAGTAACTGGG 838
Query 834 TCACAGACTTGGGTTGTCAAAGCTCTGTTTCTTTGGTCCTTGGAGGGCCACGTCCTGAAT 893
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 839 TCACAGACTTGGGTTGTCAAAACTCTGTTTCTTTGGTTCTTGGAGGGCCACGTCCTGAAT 898
Query 894 TAGCAGACACGATCGAAGAAATATGCAACCAAAAGTCTTGGAAAGGTATAGTCAAAAGA- 952
|||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 899 TAGCAGACACTATTGAAGAAATATGCAACCAAAATTCTTGGAAAGGTATAGTCAAAAGAC 958
Query 953 TTGTGGCCAAACACCAAATATATCGAAACTGTTGTTACCGGTTCAATGGGACAGTACGTT 1012
|| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 959 TT-TGGCCAAACACCAAATATATCGAAACCGTTGTCACTGGTTCAATGGGACAGTACGTT 1017
Query 1013 CCCATGTTGAACTACTATTGTAACGACTTGCCTCTCGTTTCAACAACTTACGGTTCTTCG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CCCATGTTGAACTACTATTGTAACGACTTGCCTCTCGTTTCAACAACTTACGGTTCTTCG 1077
Query 1073 GAGACTACCTTTGGGATCAATCTAGATCCTCTGTGCAAACCTGAAGATGTTTCTTACACT 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 GAGACTACCTTTGGGATCAATCTAGATCCTCTGTGCAAACCTGAAGATGTTTCTTACACT 1137
Query 1133 TTCATGCCCAACATGTCTTACTTTGAGTTCATACCAATGGATGGAG-A--CAATAACGAT 1189
|||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct 1138 TTCATGCCCAACATGTCTTACTTTGAGTTCATACCAATGGATGGAGGAGACAAGAACGAT 1197
Query 1190 GTGGTCGACCTTGAAGATGTGAAACTCGGGTGCACTTATGAACCCGTGGTCACAAATTTC 1249
||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1198 GTGGTTGACCTAGAAGATGTGAAACTTGGGTGCACTTATGAACCCGTTGTCACAAATTTC 1257
Query 1250 GCCGGCTTGTATAGGATGAGAGTGGGAGATATTGTACTGGTGACTGGTTTCTACAACAAC 1309
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1258 GCTGGCTTGTATAGGATGAGAGTGGGAGATATTGTTTTGGTGACTGGTTTCTACAACAAC 1317
Query 1310 GCGCCTCAGTTTAAGTTTGTAAGAAGAGAAAACGTCGTCTTAAGCATCGATTCCGATAAA 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 GCGCCTCAGTTTAAGTTTGTAAGAAGAGAAAACGTCGTCTTAAGCATCGATTCCGATAAA 1377
Query 1370 ACTAACGAAGAAGATCTGTTTAAGGCGGTGAGTCAAGCGAAGCTGGTTCTCGAGTCATTA 1429
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |
Sbjct 1378 ACTAACGAAGAAGATCTGTTTAAGGCTGTGAGTCAAGCGAAGCTCGTACTCGAGTCATCA 1437
Query 1430 GGTCTCGATCTGAAAGACTTCACCAGTTATGCTGACACCTCAACATTTCCCGGTCACTAC 1489
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1438 GGTCTCGATCTGAAAGACTTCACCAGTTATGCTGACACCTCAACATTTCCAGGTCACTAC 1497
Query 1490 GTGGTTTACTTGGAAGTAGATACCAAAGAGGGAGAGGAGAAGAAGACGTCACAGTTTGAG 1549
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1498 GTGGTTTACTTGGAAGTAGATACCAAAGAGGGAGAGGAGAAGGAGACGGCACAGTTTGAG 1557
Query 1550 CTCGATGAAGAGGCACTCTCCATGTGTTGTTTGGTAATGGAGGAGTCGCTTGATAATGTT 1609
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1558 CTCGATGAAGAGGCACTCTCCACGTGTTGTTTGGTAATGGAGGAGTCGCTTGATAATGTT 1617
Query 1610 TACAAGAGATGTCGATTCAAAGACGGATCGATCGGGCCTCTGGAGATAAGAGTGGTGCGT 1669
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1618 TACAAGAGATGTCGATTCAAAGACGGATCGATCGGGCCTCTCGAGATAAGAGTGGTGCGT 1677
Query 1670 CAAGGAACGTTT-ATTTCTCTCATGGACTTCTTCATCTCACAAGGTGCTTCCACTGGTCA 1728
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1678 CAAGGAACGTTTGATT-CTCTCATGGACTTCTTCATCTCACAAGGTGCTTCCACCGGTCA 1736
Query 1729 ATACAAGACTCCCAGATGCATTAAATCAGGGAAAGCCTTGCAAGTACTGGAGACATGTGT 1788
|||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1737 ATACAAGACTCCTAGATGCATTAAGTCAGGGAAAGCCTTGCAAGTATTGGAGACATGTGT 1796
Query 1789 GGTAGCCAAATTCTTCAGT-TCTTGATTGTTCTTCCTTCCCTGGATTACAGGTTCAAGTG 1847
||||||||||||||||||| | |||||||||||||||| | || | |||||||||||
Sbjct 1797 GGTAGCCAAATTCTTCAGTAT-TTGATTGTTCTTCCTTGGTTTTAT-ATAGGTTCAAGTG 1854
Query 1848 Atttgtttt-ttgtttttttGC-TAAAAGGGTATGGTTCAAGTT-ATTTGTTGTGATTTC 1904
|||||| || || ||||||| | |||| |||| |||||||| || ||||||||||||||
Sbjct 1855 ATTTGTCTTCTT-TTTTTTTCCATAAA-GGGTTTGGTTCAA-TTGATTTGTTGTGATTTG 1911
Query 1905 AGTGTGTACTAATTTGTCTGAATGTTTGTTTATATTTT 1942
|| |||||||||||||||||||||||||||||||||||
Sbjct 1912 AGAGTGTACTAATTTGTCTGAATGTTTGTTTATATTTT 1949
> AT1G23160.1 | Symbols: | Auxin-responsive GH3 family protein
| chr1:8209232-8211325 FORWARD LENGTH=1737
Length=1737
Score = 1181 bits (639), Expect = 0.0
Identities = 1378/1722 (80%), Gaps = 101/1722 (6%)
Strand=Plus/Plus
Query 138 ATTTAACTTCAGATGTGAA-GCAAATACAAGACAACT-TGTTAGAGGAGATAATCACACC 195
||||||| ||| |||| || ||| ||||||||||| | | || ||||||||| ||||| |
Sbjct 59 ATTTAACATCAAATGT-AACGCAGATACAAGACAA-TGTATTGGAGGAGATACTCACA-C 115
Query 196 CAACA-CCAAAACA-G-AGTACCTCC-AACGTT-TTCTCATCGATAGGTTCGATAAAG-A 249
|| | | ||||| | | || |||| || ||| ||| | | || || || ||||||| |
Sbjct 116 TAA-ATGC-AAACACGAATTATCTCCAAAAGTTCTTC-CTTGGA-AGCTTTGATAAAGAA 171
Query 250 TCTCTTCAAGAAAAACGTACCGA-TCGTGACATATGAAGATATTAAGCCTTATCTGGATC 308
| |||||||| |||||||| | | || || ||||||||| ||||||| ||| | || |
Sbjct 172 AGT-TTCAAGAAGAACGTACC-AGTGGTAACTTATGAAGATGTTAAGCCATATATCGAAC 229
Query 309 GTGTCGTTAATGGAGAGTCATCCG-ATGTTATATCGGCTCGACCTATTACCGGTTTCT-T 366
||||||| ||||||||| | | || |||| || ||||| || ||||| |||||||| | |
Sbjct 230 GTGTCGTGAATGGAGAGCCCT-CGAATGTCATTTCGGCCCGGCCTATAACCGGTTT-TGT 287
Query 367 GCTAAGTTCGGGAACTTCTGGGGGAGCACAAAAGATGATGCCATGGAAC-AACAAGTACT 425
|||||| |||||||||| ||||||||||||||||||||||||||||| || || || |
Sbjct 288 ACTAAGTACGGGAACTTCAGGGGGAGCACAAAAGATGATGCCATGGAATGAAAAA-TATT 346
Query 426 TGGACAATTTGACTTTCATCTACGATCTTCGTATGCA-AGTTATAACCAAGCATGTGGAA 484
| ||||| ||||| ||||| || |||||||||||||| | |||||| ||| ||||| ||
Sbjct 347 TAGACAACTTGACCTTCATGTATGATCTTCGTATGCATA-TTATAAGCAATAATGTGAAA 405
Query 485 GGTGTGGAAGAA-GGAAAAGG-GATGATGTTTCT-CTTTACTAAACAAGAATCCATGACT 541
| |||||| ||| ||||| || |||||||||| | ||| ||||||| |||||||| |||
Sbjct 406 GATGTGGA-GAAAGGAAA-GGCGATGATGTTT-TACTTCACTAAACTCGAATCCATCACT 462
Query 542 CCTTCTGGCTTGCCTGCTCGAGTCGCAACCAGCAGCTATTTGAAGAGTGACTATTTCAAG 601
|| ||||||||||||||||||||||| | ||| |||||||| ||||| |||||||||||
Sbjct 463 CCCTCTGGCTTGCCTGCTCGAGTCGCCAGCAGTAGCTATTTAAAGAGCAACTATTTCAAG 522
Query 602 CACCGGCCATCGAACTGGTACTACTCGTACACGAGCCCTGATGAAGTCA-TCTTATGCCC 660
|||| ||||| |||||||| ||||| ||||| |||||||||||||||| ||| ||| ||
Sbjct 523 AACCGTCCATCAAACTGGTATTACTCTTACACAAGCCCTGATGAAGTCACTCT-ATGTCC 581
Query 661 TA-ACAACACCCAAAGTCTGTACTGCCATTTGCTCTGTGG-CTTAGTCCAAAGAGAA-GA 717
| |||||| |||| ||| |||||||||||||| ||||| || || |||||| || ||
Sbjct 582 -AGACAACAAACAAAATCTCTACTGCCATTTGCTTTGTGGTCTG-GTTCAAAGA-AACGA 638
Query 718 GGTTGTGAGAACGGGTTCCATCTTTGCTTCGGTCATGGTCCGAGCTATCGAGGTTCTT-A 776
|||| |||| |||||| ||||| || || || ||||||||||| ||| || ||||| |
Sbjct 639 GGTTACAAGAATGGGTTCTATCTTCGCCTCCGTTATGGTCCGAGCAATCAAGTTTCTTGA 698
Query 777 AGAATTCTTGGGTGGAGTTGTGTTCAAACATCCGATC-GGGCCATCTCAGCAACTGGGTC 835
||| ||| |||| ||||||||||||||||||||||| |||| | |||||| | ||| ||
Sbjct 699 AGA-TTCATGGGAAGAGTTGTGTTCAAACATCCGATCAGGGC-AGCTCAGCGAGTGGATC 756
Query 836 ACAGAC-TTGGGTTGTCAAAGCT-CTGTTTCTTTGGTCCTTGGAGGGCCACGTCCTGAAT 893
|| ||| |||| ||||| | | | | || ||| | || ||||| ||||| | |||||||
Sbjct 757 ACGGACATTGG-TTGTCGA-GATTCGGTGTCTCTAGTTCTTGGTGGGCCTCATCCTGAAG 814
Query 894 TAGCAGACACGATCGAAGAAATATGCAACCAAAAGTCTTGGAAAGGTATAGTCAAAAGA- 952
|||||||| || ||| |||||||||||||||| | ||||||||||||| ||| ||||
Sbjct 815 CGGCAGACACCATTGAACAAATATGCAACCAAAAATGTTGGAAAGGTATAATCACAAGAC 874
Query 953 TTGTGGCCAAACACC-AAATATATCGAAACTGTTGTTACCGGTTCAATGG-GACAGTACG 1010
|| |||||||| | | |||||||| |||||| ||||||| ||||| |||| | ||||| |
Sbjct 875 TT-TGGCCAAA-AGCTAAATATATTGAAACTATTGTTACTGGTTCGATGGTG-CAGTATG 931
Query 1011 TTCCCATGTTGAACTACTATTGTAACGACT-TG---CCTCTCGTTTCAACAA-CTTACGG 1065
|||||| |||||||| || | ||| | | || |||||| ||||||||| || |||
Sbjct 932 TTCCCACATTGAACTATTACTCTAATAA-TATGTTACCTCTCATTTCAACAATCT-ACGC 989
Query 1066 TTCTTCGGAGACTACCTTT-GGGATCAATCT-AGATCCTCTGTGCAAACCTGAAGATGTT 1123
||||||||||||| | || ||| | ||||| | ||||| ||||||| |||||||||||
Sbjct 990 TTCTTCGGAGACT-CAATTCGGGTTAAATCTCA-ATCCTATGTGCAAGCCTGAAGATGTA 1047
Query 1124 TCTTACACTTTCATGCCCAACATGTCTTACTTTGAGTTCATACCAATGGATGGAGACAAT 1183
|| ||||| |||||||||||| |||| ||||| |||||||||||| |||||||||||||
Sbjct 1048 TCGTACACATTCATGCCCAACGTGTCCTACTTCGAGTTCATACCAGTGGATGGAGACAAG 1107
Query 1184 AACGATGTGGTCGACCTTGAAGATGTGAAACTCGGGTGCACTTATGAACCCGTGGTCACA 1243
|||||||| || ||||||| ||||| ||||| || || |||||| | || ||||||
Sbjct 1108 AACGATGTTGTTGACCTTGCTGATGTCAAACTTGGATGTTGTTATGAGGCTGTCGTCACA 1167
Query 1244 AATTTCGCCGGCTTGTATAGGATGAGAGTGGGAGATATTGTACTGGTGACTGGTTTCTAC 1303
||||| | ||||||||||| || ||||| ||||| ||| || |||||||||||||| |
Sbjct 1168 AATTTTTCAGGCTTGTATAGAATAAGAGTTGGAGACATTCTAGTGGTGACTGGTTTCCAT 1227
Query 1304 AACAACGCGCCTCAGTTTAAGTTTGTAAGAAGAGAAAACGTCGTCTTAAGCATCGA-TTC 1362
||||| || |||||||||| |||| |||||||||| ||||| || |||||||| || ||
Sbjct 1228 AACAAAGCACCTCAGTTTAGGTTTATAAGAAGAGACAACGTGGTTTTAAGCATTGACTTG 1287
Query 1363 CGATAAAACTAACGAAGAAGATCTGTTTAAGGCGGTGAGTCAA-GCGAAGCTGGTTCTCG 1421
|| |||||||||||||| ||||||||||||||||||| | || || || || ||| |
Sbjct 1288 -GACAAAACTAACGAAGATGATCTGTTTAAGGCGGTGAAT-AACGCAAAACTCACTCTTG 1345
Query 1422 AGTCATTAGGTCTCGAT-CTGAA-AGACTTCACCAGTTATGCTGACACCTCAACATTTCC 1479
| |||| | |||| || || || ||||||||| || |||||||| | ||| || | |||
Sbjct 1346 ACTCATCACATCTC-ATGCT-AATAGACTTCACTAGCTATGCTGATATCTCCAC-TATCC 1402
Query 1480 CGGT-CACTACGTGGTTTACTTGG-AAGTAGATACCAAAGAGGGAGAGGAGAAGA--AGA 1535
||| |||||||| ||||| |||| ||||| | | |||| | | ||| |||||| | |
Sbjct 1403 CGGGACACTACGTAGTTTA-TTGGGAAGTAAAGAACAAAAACGAAGACAAGAAGAGCAAA 1461
Query 1536 C-GTCACAGTTTGAGCTCGATGAAGAGGCACTCTCC-ATGTGTTGTTTGGTAATGGAGGA 1593
| |||| | |||||| | |||||| || |||| | ||||||||| ||||||||||
Sbjct 1462 AAG-CACA-TA-GAGCTCAAAGAAGAGACATTCTCGGA-GTGTTGTTTACTAATGGAGGA 1517
Query 1594 GTCGCTT-GATAATGTTTACAAGAGATGTCGATTCAAAGACGGA-TC-GATCGGGCC-TC 1649
|| || || | ||||||||||| ||||| || || || ||| || | | || || |
Sbjct 1518 TTCA-TTAGACAGTGTTTACAAGATTTGTCGGTTTAAGGA-GGAATCTG-TAGGACCAT- 1573
Query 1650 TGGAGATAAGAGTGGTGCGTCAAGGAACGTTT-ATTTCTCTCATGGACTT-CTTCATCTC 1707
||||||||| ||||||||||||||| || ||| ||| |||||||||| || |||||||||
Sbjct 1574 TGGAGATAAAAGTGGTGCGTCAAGGGACATTTGATT-CTCTCATGGA-TTACTTCATCTC 1631
Query 1708 ACAAGGTGCTTCCACTGGTCAATACAAGACTCCCAGATGCATTAAATCAGGGAAAGCCTT 1767
|||||||||||| | |||||||||||||||||| || ||||||||||| || ||||||||
Sbjct 1632 ACAAGGTGCTTCTATTGGTCAATACAAGACTCCAAGGTGCATTAAATCTGGAAAAGCCTT 1691
Query 1768 -GCAAGTACTGGAG-ACATGTGTGGTAGCCAAATTCTTCAGT 1807
| | ||| | ||| | | ||||||||||| ||||||||||
Sbjct 1692 AG-AGGTATTAGAGGAAAA-TGTGGTAGCCACATTCTTCAGT 1731
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96184244220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5