BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488153
Length=1760
Score E
Sequences producing significant alignments: (Bits) Value
AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein |... 2791 0.0
AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein |... 2141 0.0
AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein |... 2004 0.0
AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein |... 1733 0.0
> AT5G13350.1 | Symbols: | Auxin-responsive GH3 family protein
| chr5:4279884-4282287 FORWARD LENGTH=1764
Length=1764
Score = 2791 bits (1511), Expect = 0.0
Identities = 1681/1764 (95%), Gaps = 8/1764 (0%)
Strand=Plus/Plus
Query 1 ATGTTGCCGAAGTTTGATCTAACAGACCCAAAAGCTAGCCTGTCTCTTCTTGAGGATGTG 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTGCCAAAGTTTGATCTAACAGACCCAAAAGCTAGCCTGTCTCTTCTTGAGGATGTG 60
Query 61 ACGACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAGTACTTTCGCGTAATGCT 120
|| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 61 ACCACCAACGTAACGCAGATTCAAGATTCCATCTTGGAAGCAGTACTTTCACGTAATGCT 120
Query 121 CATACCGAGTATCTTAAAGGTTTCCTCAATGGTCAAGTTGATAAGCAAAGCTTCAAGAAG 180
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 121 CATACCGAGTATCTTAAAGGTTTCCTCAACGGTCAAGTTGATAAGCAAACCTTCAAGAAG 180
Query 181 AACGTACCCGTTGTGACCTATGAAGATATTAAGCCTTACATCGGTCGTATCGCTAATGGA 240
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 181 AACGTACCCATTGTGACCTATGAAGATATTAAGCCTTACATCAATCGTATCGCTAATGGA 240
Query 241 GAGGCGTCTGACCTCATCTGTGATCGACCCATCAGTTTATTTGTGATGAGCTCTGGTACT 300
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 241 GAGGCGTCTGATCTCATCTGTGATCGACCCATCAGTTTACTTGTGATGAGCTCTGGTACT 300
Query 301 TCAGGAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGAAGGGGAACAGAGGAttttt 360
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 301 ACAGCAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGATGGGGAACAGAGGATTATG 360
Query 361 tttGGATCTCTCTATAGATCTCTACTCTACAAGTACGTCGAGGGGATTAGAGAAGGAAAA 420
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||
Sbjct 361 TTTGGATCTCTCTATAGATCTTTACTCTATAAGTACGTCGAGGGGATTAGAGAAGG-AAA 419
Query 421 G-CTCTCACGTTCTATTTCGTGAACCCAGAAAGCGAGACTCG-CTCTGGGATACTGGTCA 478
| ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||| |||
Sbjct 420 GTCTCTCACGTTCTATTTCGTGAACCCTGAAAGAGAGACT-GCCTCTGGGATACTGATCA 478
Query 479 GGACTATGATAACTTGTATTTTGAAAAGCGTGAACAAAACCAACTCATCTCTTTGGGATA 538
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 479 GGACTATGATAACTTGTATTTTGAAAAGCGTAAACAAAACCAACTCATCTCTTTGGGATA 538
Query 539 GATTACAGATAAGCCCGCATGAAATTTCGACTTGTGAAGACACTACACAAAGCATGTACT 598
|||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct 539 GATTACAGATAAGCCCGCATGAAATTTCTACTTGTGAAGACACTACTCAGAGCATGTACT 598
Query 599 GCCAATTGCTTTGTGGGCTTCTACAACGAGATAATGTAGCTCGCCTGGGTGCACCCTTCG 658
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 599 GTCAATTGCTTTGTGGGCTTCTACAACGAGATAATGTAGCTCGCCTCGGTGCACCCTTTG 658
Query 659 CTTCTGTCTTCCTCAGAGTAATCAAGTTCTTGGAAGATCATTGGCAAGAGTTATGCTCAA 718
||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 659 CTTCTGTCTTCATCAGAGTAATCAAGTACTTGGAAGGTCATTGGCAAGAGTTATGCTCAA 718
Query 719 ACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACGCTCAATGTGTCTCAGGGATTG 778
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 719 ACATAAGGACTGGCCGTCTCAGTGACTGGATCACAGACCCTCAATGTGTCTCAGGGATTA 778
Query 779 GTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCAAGAATGCAGT- 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCAAGAATGCAGTA 838
Query 838 AAACCTTCATGGGAGGCAATTGTGAAGAGACTTTGGCGAAAAGCAAAATGCGTGGAAGCC 897
||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct 839 AAACC-TCATGGGAGGCAATAGTGAAGAGACTTTGGCCAAAAGCAAAATGCGTCGAAGCC 897
Query 898 GTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTATGGCGGTGGTCTT 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 GTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTATGGCGGTGGTCTT 957
Query 958 CCGTTGACTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGTCAATCTTAATCCT 1017
||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 958 CCGTTGATTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGTCAATGTCAATCCT 1017
Query 1018 CTGTGCAAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGGGGTACTTCGAGTTC 1077
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1018 CTGTGCAAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGGCGTACTTCGAGTTC 1077
Query 1078 TTAGAGGTCAAGAAAGACCAAAAAGAAGCTGGTCGTGATCCCATAGAGAACCATGTGGTC 1137
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 1078 TTAGAGGTCAAGAAAGACCAACAAGAAGCTGGTCTTGATCCCATAGAGAACCATGTGGTC 1137
Query 1138 GTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGTTGTCACAACGTTTTCT 1197
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1138 GTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGTCGTCACAACGTTTTCT 1197
Query 1198 GGTCTATATAGGTACCGTGTGGGTGATGTTTTAAGAGTTACTGGTTTCTACAACAATTCA 1257
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1198 GGTCTGTATAGGTACCGTGTGGGTGATCTTTTAAGAGTTACTGGTTTCTACAACAATTCA 1257
Query 1258 CCACATTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCCTCCACATGGCCAATACC 1317
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CCACATTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCCTCCACATGGCCAATACA 1317
Query 1318 TACGAAGAAGACCTCCTTAAGGCAGTGTCAAACGCAAAGCGCCTGCTGGAGCCACATGAC 1377
||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct 1318 TACGAAGAAGACCTCCTTAAGGCAGTGACAAACGCAAAGCTCCTGCTCGAGCCACATGAC 1377
Query 1378 CTGATGCTCATGGAGTTTACTAGCCGTGTGGATTCGTCCTCGTTTGTAGGACACTATGTA 1437
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 CTGATGCTAATGGAGTTCACTAGCCGTGTGGATTCGTCCTCGTTTGTAGGACACTATGTG 1437
Query 1438 CTCTATTGGGAACTCGGGAGCAAAGTCAAGGACTCAAAGCTCGAGCCTAACCGCGATGTT 1497
|||||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||
Sbjct 1438 CTCTATTGGGAACTTGGGAGCAAAGTCAAGGACGCCAAGCTCGAACCTAACCGCGATGTT 1497
Query 1498 ATGGAAGAATGCTGCTTCATTGTTGAGGAGTCTTTGGACCCTCTCTACAGAAAAGAACGA 1557
||||||||||| ||||||| |||||| ||| | ||||||||||||| ||| ||||||||
Sbjct 1498 ATGGAAGAATGTTGCTTCACCGTTGAGAAGTATCTGGACCCTCTCTATAGACAAGAACGA 1557
Query 1558 AAGAAA-GATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGCCTGGCGCTTTCGA 1616
| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1558 A-GAAAAGATAAGAACATTGGACCTCTTGAGATTAAGGTTGTTAAGCCTGGCGCCTTCGA 1616
Query 1617 CGAACTCATGAACTTCTTTCTGTCTCGAGGCTCTTCTGTGAGTCAGTACAAGACGCTGAG 1676
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1617 CGAACTCATGAATTTCTTTCTGTCTCGAGGCTCTTCTGTGAGTCAGTACAAGACGCCGAG 1676
Query 1677 GTCGGTGACGAGTGAAGAAGCCGTTAAGATATTGGAGGCCAACGTTGTTTCCGAGTTTCT 1736
|||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1677 GTCGGTGAAGACTGAAGAAGCCGTCAAGATATTGGAGGCCAACGTTGTTTCCGAGTTTCT 1736
Query 1737 TAGTCAGAAAACTCCGTCGTGGGG 1760
||||||| |||||||| |||||||
Sbjct 1737 TAGTCAGGAAACTCCGCCGTGGGG 1760
> AT5G13370.1 | Symbols: | Auxin-responsive GH3 family protein
| chr5:4286819-4289554 FORWARD LENGTH=2095
Length=2095
Score = 2141 bits (1159), Expect = 0.0
Identities = 1575/1775 (89%), Gaps = 32/1775 (2%)
Strand=Plus/Plus
Query 1 ATGTTGCCGAAGTTTGATCTAACAGACCCAAAAGCTAGCCTGTCTCTTCTTGAGGATGTG 60
||||| || ||||| |||| |||| ||| ||||||| | |||||||||||||||||| ||
Sbjct 178 ATGTTACCAAAGTTCGATCCAACAAACCAAAAAGCTTGTCTGTCTCTTCTTGAGGATTTG 237
Query 61 ACGACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAGTACTTTCGCGTAATGCT 120
|| ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||
Sbjct 238 ACCACCAACGTAAAGCAGATTCAAGATTCCGTATTGGAAGCAATACTTTCACGTAATGCT 297
Query 121 CATACCGAGTATCTTAAAGGTTTCCTCAATGGTCAAGTTGATAAGCA-AAGCTTCAAGAA 179
|| || |||||||||| |||||||||||| |||||||| |||||||| || |||||||||
Sbjct 298 CAAACTGAGTATCTTAGAGGTTTCCTCAACGGTCAAGTCGATAAGCAGAA-CTTCAAGAA 356
Query 180 GAACGTACCCGTTGTGACCTATGAAGATATTAAGCCTTACATCGGTCGTATCGCTAATGG 239
|||||||||||||||||||| |||||||||| | |||| |||| ||||||||||||||
Sbjct 357 AAACGTACCCGTTGTGACCTACGAAGATATTAGGTCTTATATCGACCGTATCGCTAATGG 416
Query 240 AGAGGCGTCTGACCTCATCTGTGATCGACCCATCAGTTTA-TTTGTGATGAGCTCTGGTA 298
|||| ||||||| |||||||||||||||||||||||| || | | ||| ||||| ||||
Sbjct 417 AGAGCCGTCTGATCTCATCTGTGATCGACCCATCAGTGTACTCT-TGACCAGCTCGGGTA 475
Query 299 CTTCAGGAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGAAGGGGAACAGAGGAttt 358
||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 476 CTTCAGGAGGAGTTCCAAAGTTGATTCCTTTGACAACAGAGGATTTGGAACAGAGGATTT 535
Query 359 -tttttGGATCTCTCTATAG-ATCTCTACTCTACAAGTACGTCGAGGGGATTAGAGAAGG 416
|||| ||||||||| | | |||||||||||||| || |||| ||| |||| |||||
Sbjct 536 CGTTTT-CTTCTCTCTAT-GCACCTCTACTCTACAAGCACATCGATGGGCTTAGCGAAGG 593
Query 417 AAAAGCTCTCACGTTCTATTTCGTGAACCC-AGAAAGCGAGACTCG-CTCTGGGAT-ACT 473
|||| |||||| || ||||| ||| |||| ||| ||| ||||| | | |||| | | |
Sbjct 594 AAAATCTCTCATATTTTATTTTGTG-ACCCGAGAGAGCAAGACT-GCCAATGGGTTGA-T 650
Query 474 GGTCAGGACTATGATAACTTGTATTTTGAAAAGC-GTGAACAAAACCAACTCATCTCTTT 532
||||||||||||| | ||| || ||||||||||| | ||| | |||||||||| |||||
Sbjct 651 GGTCAGGACTATGGTTACTAGTTTTTTGAAAAGCATTAAAC-AGACCAACTCATTTCTTT 709
Query 533 GGGATAGATTACAGATAAGCCCGCATGAAATTTCGACTTGTGAAGACACTACACAAAGCA 592
||||||| |||||| |||||||||||| ||| | ||||||| ||||||||| || ||||
Sbjct 710 GGGATAGCTTACAGGTAAGCCCGCATGCGATTACTACTTGTGCAGACACTACTCAGAGCA 769
Query 593 TGTACTGCCAATTGCTTTGTGGGCTTCTACAACGAGATAATGTAGCTCGCCTGGGTGCAC 652
|||||||||||||||||||||||||||| || |||||||||| |||||||| |||||||
Sbjct 770 TGTACTGCCAATTGCTTTGTGGGCTTCTTGAAAGAGATAATGTTGCTCGCCTCGGTGCAC 829
Query 653 CCTTCGCTTCTGTC-TTCCTCAGAGTAATCAAGTTCTTGGAAGATCATTGGCAAGAGTTA 711
|||| ||||| || ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 830 CCTTTGCTTC-ATCATTCCTCAAAGTAATCAAGTTCTTGGAAGATCATTGGCCTGAGTTA 888
Query 712 TGCTCAAACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACGCTCAATGTGT-C-T 769
||||||||||||||||||||||||||||| |||||||| ||||||| | | ||| | |
Sbjct 889 TGCTCAAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACG--CGACCTGTACTT 946
Query 770 CAGGGATTGGTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCAAG 829
||||||| |||||||||||||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct 947 CAGGGATCGGTAAGTTCCTCACTGCTCCAAATCCGGAACTAGCAAGCCTGATCGAGCAAG 1006
Query 830 AATGCAGTAAACCTTCATGGGAGGCAAT-TGTGAAGAGACTTTGGCGAAAAGCAAAATGC 888
||||||||||| | |||||||||||||| | ||||||||||||||| |||||||||||||
Sbjct 1007 AATGCAGTAAAACATCATGGGAGGCAATAT-TGAAGAGACTTTGGCCAAAAGCAAAATGC 1065
Query 889 GTGGAAGCCGTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTATGGC 948
| ||| || || |||||||| ||||||||||||||||||| ||||||||||||||| |
Sbjct 1066 ATCGAATCCATCATTACAGGCACCATGGCACAGTACATTCCATTGCTGGAATTCTATAGT 1125
Query 949 GGTGGTCTTCCGTTGACTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGTCAAT 1008
||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1126 GGTGGTCTTCCTTTGACTTCATCGTTTTACGGCAGCTCTGAATGTTTCATGGGTGTCAA- 1184
Query 1009 C-TTAATCCTCTGTGCAAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGGGGTA 1067
| ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||
Sbjct 1185 CTTTAATCCTCTGTGTAAGCCTAGTGATGTGTCGTACACCATCATTCCATGTATGGGGTA 1244
Query 1068 CTTCGAGTTCTTAGAGGTCAAGAAAGACCAAAAAGAAGCTGGTCGTGATCCCATAGAG-A 1126
||||||||||||||||||| |||||||||| |||||||||||| |||||||| |||| |
Sbjct 1245 CTTCGAGTTCTTAGAGGTCGAGAAAGACCATCAAGAAGCTGGTCATGATCCCACAGAGAA 1304
Query 1127 ACCATGTGGTCGTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGTTGTCA 1186
||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1305 ACC-TGTGGTTGTCGATCTTGTCGATGTTAAAATCGGCCATGATTATGAACCTGTTGTCA 1363
Query 1187 CAACGTTTTCTGGTCTATATAGGTACCGTGTGGGTGATGTTTTAAGAGTTACTGGTTTCT 1246
|||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||
Sbjct 1364 CAACGTTTTCAGGTCTATATAGGTACCGTGTGGGGGACGTTTTAAGAGCGACTGGTTTCT 1423
Query 1247 ACAACAATTCACCACATTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCCTCCACA 1306
|||||||| | |||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct 1424 ACAACAATGCGCCACATTTTTGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCATCGACA 1483
Query 1307 TGGCCAATACCTACGAAGAAGACCTCCTTAAGGCAGTGTCAAACGCAAAGCGCCTGCTGG 1366
||| ||| ||||||||||| |||||||| ||||||||| |||||||||||| |||||| |
Sbjct 1484 TGGACAAGACCTACGAAGACGACCTCCTCAAGGCAGTGACAAACGCAAAGCTCCTGCTTG 1543
Query 1367 AGCCACATGACCTGATGCTCATGGAGTTT-ACTAGCCGTGTGGATTCGTCCTCGTTTGTA 1425
||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |
Sbjct 1544 AGCCACATGACCTGATGCTCATGGA-TTTCACTAGCCGTGTAGATTCGTCCTCGTTTCCA 1602
Query 1426 GGACACTATGTACTCTATTGGGAACTCGGGAGCAAAGTCAAGGACTCAAAGCTCGAGCCT 1485
|||||||||||| |||||||||||||||||||||||||||||||| | ||| | || |||
Sbjct 1603 GGACACTATGTAATCTATTGGGAACTCGGGAGCAAAGTCAAGGACGCCAAGTTTGAACCT 1662
Query 1486 AACCGCGATGTTATGGAAGAATGCTGCTTCATTGTTGAGGAGTCTTTGGACCCTCTCTAC 1545
||||||||||||||||||||||||||||||| ||||||||||||| | || || | |||
Sbjct 1663 AACCGCGATGTTATGGAAGAATGCTGCTTCACTGTTGAGGAGTCTCTCGATGCTGTATAC 1722
Query 1546 AGAAAAGAACGAAAGAAAGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGCCT 1605
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1723 AGAAAAGGACGAAAGAATGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGCCT 1782
Query 1606 GGCGCTTTCGACGAACTCATGAACTTCTTTCTGTCTCGAGGCTCTTCTGTGAGTCAGTAC 1665
|||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1783 GGCGCTTTTGACGAGCTCATGAACTTCTTTCTGTCTAGAGGCTCTTCTGTGAGTCAGTAC 1842
Query 1666 AAGACGCTGAGGTCGGTGACGAGTGAAGAAGCCGTT-AAGATATTGGAGGCCAACGTTGT 1724
||||| | |||||||||||||| |||||||||| || ||||||||||||||||||||| |
Sbjct 1843 AAGACACCGAGGTCGGTGACGAATGAAGAAGCC-TTGAAGATATTGGAGGCCAACGTTAT 1901
Query 1725 TTCCGAGTTTCTTAGTCAGAAAACTCCGTCGTGGG 1759
||||||||||||||| | ||||| ||| |||||||
Sbjct 1902 TTCCGAGTTTCTTAGCCGGAAAATTCCATCGTGGG 1936
> AT5G13360.3 | Symbols: | Auxin-responsive GH3 family protein
| chr5:4283356-4286212 FORWARD LENGTH=2243
Length=2243
Score = 2004 bits (1085), Expect = 0.0
Identities = 1554/1778 (87%), Gaps = 41/1778 (2%)
Strand=Plus/Plus
Query 1 ATGTTGCCGAAGTTTGATCTAACAGACCCAAAAGCTAGCCTGTCTCTTCTTGAGGATGTG 60
|||||||| ||||| |||| |||||||| ||||||| | |||||||||||||||||||||
Sbjct 367 ATGTTGCCAAAGTTCGATCCAACAGACCAAAAAGCTTGTCTGTCTCTTCTTGAGGATGTG 426
Query 61 ACGACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAGTACTTTCGCGTAATGCT 120
|| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct 427 ACTACCAACGTAAAGCAGATTCAAGATTCTGTCTTGGAAGCAATACTTTCACGTAATGCT 486
Query 121 CATACCGAGTATCTTAAAGGTTTCCTCAATGGTCAAGTTGATAAGCAAAGCTTCAAGAAG 180
|||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||
Sbjct 487 CATACCGAGTATCTTAGTGGTTTCCTCAACGGTCAAGCTGATAAGAAAAGCTTCAAGAAG 546
Query 181 AACGTACCCGTTGTGACCTATGAAGATATTAAGCCTTACATCGGTCGTATCGCTAATGGA 240
|| ||||||||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||
Sbjct 547 AATGTACCCGTTGTAACCTACGAAGATATTAAGCCTTATATCGATCGTATCGCCAATGGA 606
Query 241 GAGGCGTCTGACCTCATCTGTGATCGACCCATCAGTTTA-TTTGTGA-TGAGCTCTGGTA 298
||| ||||||| |||||||||||||||||||||||| || | | ||| | ||||| ||||
Sbjct 607 GAGCCGTCTGATCTCATCTGTGATCGACCCATCAGTGTACTCT-TGACT-AGCTCAGGTA 664
Query 299 CTTCAGGAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGAAG-GGGAACAGAGGAtt 357
||||||||||| ||| || ||||||||||||||||||||| || |||||||||||||
Sbjct 665 CTTCAGGAGGAGTTCCGAAGCTGATTCCTTTGACAACAGAGG-AGTTGGAACAGAGGATT 723
Query 358 ttttttGGATCTCTCTATAGATCTCTACTCTACAAGTACGTCGAGGGGATTAGAGAAGGA 417
| |||| |||||||||||| ||||||||||||||||| ||||||| ||||||||| ||
Sbjct 724 TCGTTTGCTTCTCTCTATAGACCTCTACTCTACAAGTACATCGAGGGTATTAGAGAAAGA 783
Query 418 AAAGCTCTCACGTTCTATTTCGTGAAC-CCAGAAAGCGAGACTCGC-TCTGGGATACTGG 475
||| || ||| ||| ||||||||| || | ||||||||||||| || |||||||||||||
Sbjct 784 AAATCTTTCATGTTATATTTCGTG-ACTCGAGAAAGCGAGACT-GCTTCTGGGATACTGG 841
Query 476 TCAGGACTATGATAACTTGTATTTTGAAAAGCGTGAAC-AAAACCAACTCATCTCTTTGG 534
|||||||||||||||||||| |||||||||||||| || | | ||||| | | | |||
Sbjct 842 TCAGGACTATGATAACTTGTGTTTTGAAAAGCGTG-ACGCCAGCTAACTCTTTTATCTGG 900
Query 535 GAT-AGATTACAGATAAGCCCGCATGAAATTTCGACTTGTGAAGACACTACACAAAGCAT 593
||| | || ||||||||||||||||| ||| |||||||| ||||||||| || |||||
Sbjct 901 GATCA-ATCACAGATAAGCCCGCATGCGATTACGACTTGTTCAGACACTACTCAGAGCAT 959
Query 594 GTACTGCCAATTGCTTTGTGGGCTTCTACAACGAGATAATGTAGCTCGCCTGGGTGCACC 653
|||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 960 GTACTGCCAACTGCTTTGTGGGCTTCTACAACGAGATAATGTAGGTCGCCTTGGTGCACC 1019
Query 654 CTTCGCTTCTGT-CTTCCTCAGAGTAATCAAGTTCTTGGAAGATCATTGGCAAGAGTTAT 712
|| ||||| | ||| |||| | |||||||||||||||| ||||| |||| ||||| |
Sbjct 1020 ATTTGCTTC-ATCCTTTCTCAAAATAATCAAGTTCTTGGAGGATCACTGGCCTGAGTTTT 1078
Query 713 GCTCAAACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACGCTCAATGTGTCTCAG 772
||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||
Sbjct 1079 GCTCAAACATAAGGACTGGTTGTCTCAGTGACTGGATTACAGACCCCCAATGTGTTTCAG 1138
Query 773 GGATTGGTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCAAGAAT 832
|||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 1139 GGATCGGTAAGTTCCTCACTGCTCCTAATCCGGAACTAGCGAGCCTTATCGAGCAAGAAT 1198
Query 833 GCAGT-AAACCTTCATGGGAGGCAATTGTGAAGAGACTTTGGCGAAAAGCAAAATGCGTG 891
||||| ||| | |||||||| ||||| ||||||||||| |||| ||||||||||||| |
Sbjct 1199 GCAGTCAAA-CATCATGGGAAGCAATAGTGAAGAGACTATGGCCAAAAGCAAAATGCATC 1257
Query 892 GAAGCCGTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTATGGCGGT 951
|||||| | |||||||| ||||||||||||||| ||| || |||||||||||| |||||
Sbjct 1258 GAAGCCATTGTTACAGGAACCATGGCACAGTACAATCCATTACTGGAATTCTATAGCGGT 1317
Query 952 GGTCTTCCGT-TGACTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGTCAATCT 1010
|||||||| | ||| |||| ||| ||||||||||||||||||||| | ||| |||||||
Sbjct 1318 GGTCTTCC-TGTGATTTCAACGTTTTATGGCAGCTCTGAATGTTTCTTCGGTCTCAATCT 1376
Query 1011 TAATCCTCTGTGC-AAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGGGGTACT 1069
|||||||||| | ||||||| || ||||||||||||||||| |||| ||||| || |
Sbjct 1377 CAATCCTCTGT-CTAAGCCTAATGAGGTGTCGTACACCATCATTCCATGTATGGCTTATT 1435
Query 1070 TCGAGTTCTTAGAGGTCAAGAAAGACCAAAAAGAAGCTGGTCGTGATCCCATAGAGAA-C 1128
|||||||||||||||| ||||||| | | | ||| ||||| ||||||| |||||| |
Sbjct 1436 TCGAGTTCTTAGAGGTTGAGAAAGA-CTATGA-AAG-TGGTCATGATCCCGCAGAGAATC 1492
Query 1129 CATGTGGTCGTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGTTGTCACA 1188
| ||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1493 C-TGTTGTAGTCGATCTTGTCGATGTTAAAATCGGTCATGATTATGAACCTGTTGTCACA 1551
Query 1189 ACGTTTTCTGGTCTATATAGGTACCGTGT-GGGTGATGTTTTAAGAGTTACTGGTTTCTA 1247
|||||| ||||| | |||||||||||| | ||| || ||||||||||| |||||||||||
Sbjct 1552 ACGTTTGCTGGTTTGTATAGGTACCGTTTAGGG-GACGTTTTAAGAGTGACTGGTTTCTA 1610
Query 1248 CAACAATTCACCACA-TTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAGCCTCCACA 1306
||||||| | ||||| ||| | ||||||||||||||||||||||||||||||| || |||
Sbjct 1611 CAACAATGCGCCACAGTTT-CATTTCGTGGGAAGACAGAAAGTTGTTCTGAGCATCGACA 1669
Query 1307 TGGCCAATACCTACGAAGAAGACCTCCTTAAGGCAGTGTCAAACGCAAAG-CGCCTGCTG 1365
||| ||| |||||||| ||||||||||| ||||||||| | ||||| || | ||||||
Sbjct 1670 TGGACAAGACCTACGACGAAGACCTCCTCAAGGCAGTGACTAACGC-GAGTCTCCTGCTT 1728
Query 1366 GAGCCACATGACCTGATGCTCATGGAGTTT-ACTAGCCGTGTGGATTCGTCCTCGTTTGT 1424
|||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||| |
Sbjct 1729 GAGCCACATGACCTAATGCTCATGGA-TTTCACTAGCCGTGTGGATTCCTCCTCGTATCC 1787
Query 1425 AGGACACTATGTACTCTATTGGGAACTCGGGAGCAAAGTCAAGGACTCAAAGCTCGAGCC 1484
||| ||||| || ||||| |||||||||||||| |||||||||||| | ||||| ||||
Sbjct 1788 AGGTCACTACGTGCTCTACTGGGAACTCGGGAGAAAAGTCAAGGACGCCAAGCTTGAGCT 1847
Query 1485 TAACCGCG-ATGTTATGGAAGAATGCTGCTTCATTGTTGAGGAGTCTTTGGACCCTCTCT 1543
| ||| | ||||| |||| ||||||||||||| ||||||||||| ||||| | | |
Sbjct 1848 TGACC-AGAATGTTTTGGAGGAATGCTGCTTCACCATTGAGGAGTCTCTGGACGCGGTTT 1906
Query 1544 ACAGAAAAGAACGAAAGAAAGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGC 1603
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 ACAGAAAAGGACGAAAGAATGATAAGAACATTGGACCACTTGAGATTAAGGTTGTTAAGC 1966
Query 1604 CTGGCGCTTTCGACGAA-CTCATGAACTTCTTTCTGTCTCGAGGCTCTTCTGTGAGTCAG 1662
|||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1967 CTGGCGCTTTCGAC-AAGCTCATGAACTTCTTTCTGTCTAGAGGCTCTTCTGTGAGTCAG 2025
Query 1663 TACAAGACGCTGAGGTCGGTGACGAGTGAAGAAGCCGTT-AAGATATTGGAGGCCAACGT 1721
|| ||||| | |||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct 2026 TATAAGACACCGAGGTCGGTGACGAATGAAGAAGCC-TTGAAGATATTGGAGGCCAACGT 2084
Query 1722 TGTTTCCGAGTTTCTTAGTCAGAAAACTCCGTCGTGGG 1759
||| |||||||||||||| |||||||||||||||||||
Sbjct 2085 TGTGTCCGAGTTTCTTAGCCAGAAAACTCCGTCGTGGG 2122
> AT5G13380.1 | Symbols: | Auxin-responsive GH3 family protein
| chr5:4289839-4292441 FORWARD LENGTH=2034
Length=2034
Score = 1733 bits (938), Expect = 0.0
Identities = 1519/1792 (85%), Gaps = 69/1792 (4%)
Strand=Plus/Plus
Query 1 ATGTTGCCGAAGTTTGATCTAACAGACCCAAAAGCTAGCC-TGTCTCTTCTTGAGGATGT 59
|||||||| ||||| |||| |||| ||||| ||||| || ||||| |||||||||||||
Sbjct 164 ATGTTGCCAAAGTTCGATCCAACAAACCCATTAGCTA-CCATGTCTGTTCTTGAGGATGT 222
Query 60 GACGACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAGTACTTTCGCGTAAT-G 118
|||||||||||||||| | |||||||||||| ||||||||||| ||||||| |||||| |
Sbjct 223 GACGACCAACGTAAAGAAAATTCAAGATTCCCTCTTGGAAGCAATACTTTCACGTAATAG 282
Query 119 CTCATACCGAGTATCTTAAAGGTTTCCTCAATGGTCAAGTTGATAAGCAAAGCTTCAAGA 178
||| |||||||| |||| ||||||||||| |||||| | |||||||| ||||||||||
Sbjct 283 -TCAGACCGAGTACCTTAGAGGTTTCCTCACCGGTCAACTCGATAAGCAGAGCTTCAAGA 341
Query 179 AGAACGTACCCGTTGTGACCTATGAAGATATTAAGCCTTACATCGGTCGTATCGCTAATG 238
||||||||||| |||||||||| ||||||||||||||| | |||| ||| ||||||||||
Sbjct 342 AGAACGTACCCATTGTGACCTACGAAGATATTAAGCCTCATATCGATCGCATCGCTAATG 401
Query 239 GAGAGGCGTCTGACCTCATCTGTGATCGACCCATCAGT-TTAT-TTGTGATGAGCTCTGG 296
||||| ||||||| ||||| |||||||||||||||||| || | ||| | | | | ||
Sbjct 402 GAGAGCCGTCTGATCTCATTTGTGATCGACCCATCAGTCTTCTCTTG-G-CCACCACGGG 459
Query 297 TACTTCAGGAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGAAGGGGAACAGAGGAt 356
||||||||||| |||| ||| ||||||||| ||||| |||||||| ||||||||||||
Sbjct 460 AACTTCAGGAGGTATTCCAAAGTTGATTCCTCTGACAGCAGAGGAATTGGAACAGAGGAT 519
Query 357 tttttttGGATCTCTCTATAG-ATCTCTACTCTACAAGTACGTCGAGGGGATTAGAGAAG 415
|| ||||| | ||||||| | | ||||| ||| ||| || |||| ||| | | |||
Sbjct 520 ATTGTTTGGGTTTCTCTAT-GTACCTCTAGTCTTCAAACACATCGAAGGGCTAACCCAAG 578
Query 416 GAAAAGCTCTCACGTTCTATTTCGTGAACCC-AGAAAGCGAGACTCG-CTCTGGGA-T-A 471
| ||| |||||| ||| ||||| ||| |||| ||||||||||||| | |||| ||| | |
Sbjct 579 GCAAATCTCTCATGTTTTATTTTGTG-ACCCGAGAAAGCGAGACT-GTCTCT-GGACTGA 635
Query 472 CTGGTCAGGACTATGATAACTTGTATTTTGAAAAGCGTGAACAAAACCAACTCATCTCTT 531
|||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 636 -TGGTCAGGTTTATGATCACTTGTGTTTTGAAAAGCGTGAACCCAACCAACTCATTTCTT 694
Query 532 TGGGATAGATTACAGATAAGCCCGCATGAAATTTCGACTTGTGAAGACACTACA-CAAAG 590
|||||| || |||| ||||||||||||| |||| ||| |||||||||||||| | || |
Sbjct 695 TGGGATCGAGTACAAATAAGCCCGCATGCAATTGCGATTTGTGAAGACACTA-ATCAGGG 753
Query 591 CATGTACTGCCAATTGCTTTGTGGGCTTCTACAACGAGATA-ATGTAGCTCGCCTGGGTG 649
|||||||||||||||||||||||| ||||| |||||||| | ||||||||||||| ||||
Sbjct 754 CATGTACTGCCAATTGCTTTGTGGACTTCTCCAACGAGA-ACATGTAGCTCGCCTAGGTG 812
Query 650 CACCCTT-CGCTTCTGT-CTTCCTCAGAGTAATCAAGTTCTTGGAAGATCATTGGCAAGA 707
| |||| |||||| | |||||||| |||||| ||||| |||||||||||||||| ||
Sbjct 813 C-GCCTTATGCTTCT-TCCTTCCTCAAAGTAATAAAGTTTTTGGAAGATCATTGGCCTGA 870
Query 708 GTTATGCTCAAACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACGCTCAATGTGT 767
||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 871 GTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACGCCCAATGTGT 930
Query 768 CTCAGGGATTGGTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCA 827
|||||||| ||||| ||||||||||||||| ||||||||||||| | ||| ||||| ||
Sbjct 931 TTCAGGGATCGGTAACTTCCTCACCGCTCCAGATCCGGACCTAGCAAACCTGATCGAACA 990
Query 828 AGAATGCAGT-AAACCTTCATGGGAGGCAAT-TGTGAAG-AGACTTTGGCGAAAAGCAAA 884
|||||||||| ||||| |||||||||||||| | || || ||| |||||| |||||||||
Sbjct 991 AGAATGCAGTAAAACC-TCATGGGAGGCAATAT-TG-AGTAGAATTTGGCCAAAAGCAAA 1047
Query 885 ATGCGTGGAAGCCGTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTA 944
||| | ||||||||| |||| ||| |||||||||||||||| || ||||||||||||||
Sbjct 1048 ATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATACCATTGCTGGAATTCTA 1107
Query 945 TGGCGGTGGTCTTCCGTTGACTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGT 1004
||||||||||||||| ||| |||||| |||||||||||||| ||||||||||| ||| |
Sbjct 1108 TGGCGGTGGTCTTCCTTTGGTTTCATCATGGTATGGCAGCTCCGAATGTTTCATCGGTAT 1167
Query 1005 CAATCTTAATCCTCTGTGC-AAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGG 1063
|||||| |||||||||| | |||||||| |||||||||||||||||||| ||| |||||
Sbjct 1168 CAATCTCAATCCTCTGT-CTAAGCCTAGTGATGTGTCGTACACCATCATTCCAAGTATGG 1226
Query 1064 GGTACTTCGAGTTC-TTAGAGGTCAAGAAAGACCAAAAAGAAGCTGGTCGTGATCCCATA 1122
||||||| |||||| || |||||| |||||||| |||||||||| | || ||||
Sbjct 1227 GGTACTTTGAGTTCATT-GAGGTCGTGAAAGACCGTCAAGAAGCTGGCCATGTTCCC--- 1282
Query 1123 G-AGAACCATGTGGTCGTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGT 1181
| || ||| |||||| ||||| || ||||||||||||||||||||||||||||||| | |
Sbjct 1283 GCAG-ACCCTGTGGTGGTCGACCTCGTCGATGTTAAAATTGGCCATGATTATGAACTTCT 1341
Query 1182 TGTCACAACGTTTTCTGGTCTATATAGGTACCGTGT-GGGTGATGTTTTAAGAGTTACTG 1240
||||||||||||||||||||| |||||||||||| | ||| ||||||||| |||| ||||
Sbjct 1342 TGTCACAACGTTTTCTGGTCTGTATAGGTACCGTTTAGGG-GATGTTTTACGAGTGACTG 1400
Query 1241 GTTTCTACAACAATTCACCAC-A-TTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAG 1298
||||| |||||||| | |||| | ||| | |||||||| |||||||| || ||||||||
Sbjct 1401 GTTTCCACAACAATGCGCCACAATTTTAC--TTCGTGGGGAGACAGAATGTAGTTCTGAG 1458
Query 1299 CCTCCACATG-GCCAATACCTACGAAGAAGACCTCCTTAAGGCAGTGTCAAACGCAAAG- 1356
| || || || | ||| ||||||||||||||||| || ||||||||| |||||| ||
Sbjct 1459 CATCGACTTGAG-CAAGACCTACGAAGAAGACCTTCTCAAGGCAGTGAAAAACGC-GAGT 1516
Query 1357 CGCCTGCTGGAGCCACATGACCTGATGCTCATGGAGTTT-ACTAGCCGTGTGGATTC-GT 1414
| |||||| |||||||||||||||||||||||||| ||| ||||||||||| || || |
Sbjct 1517 CTCCTGCTTGAGCCACATGACCTGATGCTCATGGA-TTTCACTAGCCGTGTAGA-TCTAT 1574
Query 1415 CCTCGTTTG-TAGGACACTATGTACTCTATTGGGAACTCGGGAGCAAAGTCAAGGACTCA 1473
||||| ||| ||||||||| || |||||||||||||| || | |||| ||||| || |
Sbjct 1575 CCTCG-TTGCCAGGACACTACGTGCTCTATTGGGAACTTGGTAACAAATTCAAGAACGCC 1633
Query 1474 AAGCTCGA-GCCTAACCGCGATGT-TATGGAAGAATGCTGCTTCATTGTTGAGGAGTCTT 1531
|||||||| || || | |||| | |||| ||||| ||||| | ||||||||||||
Sbjct 1634 AAGCTCGATCCCAAATC-TAATGTCT-TGGAGGAATGTTGCTTAACCGTTGAGGAGTCTC 1691
Query 1532 TGGACCCTCTCTACAGAAAAGAACGAAAGAAA-GATAAGAACATTGGACCACTTGAGATT 1590
| ||| || |||||||| ||| |||||| ||| ||||||| |||||||||||||||||||
Sbjct 1692 TCGACTCTATCTACAGAGAAGGACGAAA-AAATGATAAGATCATTGGACCACTTGAGATT 1750
Query 1591 AAGGTTGTTAAGCCTGGCGCTTTCGACGAACTCATGAACTTCTTTC-TGTCTCGAGGCTC 1649
||||| ||||| ||||||||||| || || |||||||| ||| ||| |||||||||||||
Sbjct 1751 AAGGTAGTTAAACCTGGCGCTTTTGATGAGCTCATGAATTTC-TTCTTGTCTCGAGGCTC 1809
Query 1650 TTCTGTGAGTCAGTACAAGACGCTGAGGTCGGTGACG-AGTGAAGAAGCCGTT-AAGATA 1707
||||||||||||||||||||| | ||||| |||||| | |||||||||| || || |||
Sbjct 1810 TTCTGTGAGTCAGTACAAGACTCCAAGGTCAGTGACGCA-TGAAGAAGCC-TTGAATATA 1867
Query 1708 TTGGAGGCCAACGTTGTTTCCGAGTTTCTTAGTCAGAAAACTCCGTCGTGGG 1759
|||||| | ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1868 TTGGAGTCGAACGTTGTTTCCGAGTTTCTTAGCCGGAAAACTCCGTCGTGGG 1919
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87047745030
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5