BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488177
Length=2487
Score E
Sequences producing significant alignments: (Bits) Value
AT5G13580.1 | Symbols: | ABC-2 type transporter family protein... 3808 0.0
AT3G55110.1 | Symbols: | ABC-2 type transporter family protein... 348 2e-94
AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex hom... 327 2e-88
> AT5G13580.1 | Symbols: | ABC-2 type transporter family protein
| chr5:4370692-4373201 FORWARD LENGTH=2510
Length=2510
Score = 3808 bits (2062), Expect = 0.0
Identities = 2366/2511 (94%), Gaps = 28/2511 (1%)
Strand=Plus/Plus
Query 1 TGTTAATCAGCCCAACCACATTGAGAA-TTTATCTATAAATAGAAATAGAAGTTAAATCG 59
|||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct 4 TGTTAAACAGCCCAACCACATTGAGAATTTTATCTATAAATAGAATTAGAAATTAAATCC 63
Query 60 TTGGTTAAACACTTAAAC-C-CCTTTCCTCTTTTCTTCTCCTGCTAAC-G--G---T-A- 109
|||||||||| | | ||| | ||||||||||||||||||| |||||| | | | |
Sbjct 64 TTGGTTAAACCCAT-AACTCTTCTTTCCTCTTTTCTTCTCCGGCTAACGGTAGTTTTGAC 122
Query 110 ---GTT--TTTCT-CTCCGTCTATTGATTTTTCCCGCTTCACAATCGCAACAAACCCAAA 163
||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 GCCGTTAGTTTTTCCTCCGTCTATTGATTTTTCCCGCTTCACAATCGCAACAAACCCAAA 182
Query 164 GAAGAATGTCTCGTGTGGTCGCAGCAGACGACAATATGGCGTTGCCGCTCTTCTCGCCGG 223
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 183 GAAGAATGTCTCGTGTGGTCGCAGCGGACGACAATATGGCGTTGCCGTTCTTCTCGCCGG 242
Query 224 AGTTTGGCAATGTCTCAGGCGCCTCGTCTTCTCCAACAACGTTCGCACAGCTCTTGCAAA 283
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 243 AGTTTGGCAATGTCTCAGGCGCGTCGTCTTCTCCAACAACGTTCGCACAGCTCTTGCAAA 302
Query 284 ACGTCGACGACACGACGCGTCGTAGTCATGACCAGCATCACGTTGATGTCGATCTCGCCT 343
||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 303 ACGTCGACGACTCCACGCGTCGTAGTCACCACCAGCATCACGTTGATGTGGATCTCGCCT 362
Query 344 CGCCCGACCAATCCGTACCGTTCGTTCTCTCGTTCACCGATCTCACTTACAGCGTCAAAG 403
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 363 CGCCGGACCAATCCGTACCGTTCGTTCTCTCGTTCACTGATCTCACTTACAGCGTCAAAG 422
Query 404 TTCGCCGGAAGTTCACATGGAGGCGCAGCGTTTCTTCAGATCCCGGAGCTCCGTCGGAGG 463
|||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||
Sbjct 423 TTCGCCGGAAGTTCACATGGAGACGCAGTGTTTCTTCAGATCCTGGAGCTCCGTCTGAGG 482
Query 464 GGATCTTCTCTTCCAAAACGAAGACGCTCCTCAACGGAATCTCCGGAGAGGCTAGAGACG 523
|||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 483 GGATCTTCTCTTCCAAGACGAAGACGCTCCTCAACGGAATCACCGGAGAAGCTAGAGACG 542
Query 524 GAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCCGGAAAATCGACACTGATCGATGCAT 583
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct 543 GAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCTGGAAAATCGACGCTGATCGATGCGT 602
Query 584 TAGCTAATCGAATCGCTAAAGGAAGCTTGAAAGGAAACGTAACTCTAAACGGAGAAGTTC 643
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 603 TAGCGAATCGAATCGCTAAAGGAAGCTTGAAAGGAAATGTAACTCTAAACGGAGAAGTTC 662
Query 644 TCAATTCGAAAATGCAGAAAGCCATCTCAGCTTATGTGATGCAAGACGATCTTCTTTTTC 703
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 663 TCAATTCGAAAATGCAGAAAGCGATCTCAGCTTATGTGATGCAAGACGATCTTCTTTTTC 722
Query 704 CGATGCTTACAGTTGAAGAAACCTTAATGTTTGCCGCCGAGTTTCGTCTTCCGCGAAGCC 763
||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 723 CGATGCTTACAGTTGAAGAAACCTTAATGTTCGCTGCCGAGTTTCGTCTCCCGCGAAGCC 782
Query 764 TTTCGAAATCAAAGAAGAGTCTCCGTGTCCAAGCTTTGATTGATCAATTAGGACTTAGAA 823
||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||
Sbjct 783 TTTCGAAATCAAAGAAGTCTCTCCGTGTCCAAGCCTTGATTGATCAGTTAGGACTTAGAA 842
Query 824 ACGCAGCAAATACCGTGATCGGAGATGAAGGCCACCGTGGAATCTCTGGAGGAGAGAGGC 883
|||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 843 ACGCGGCGAATACGGTGATCGGAGATGAAGGACACCGTGGAATCTCTGGAGGAGAGCGAC 902
Query 884 GGCGAGTTTCAATTGGAATTGATATCATCCATGATCCGATTCTGCTTTTCCTCGATGAAC 943
||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||
Sbjct 903 GGCGAGTTTCAATCGGGATCGATATCATCCACGATCCGATTCTGCTTTTCCTCGATGAAC 962
Query 944 CAACCTCGGGTTTGGACTCTACAAGTGCTCTAAGTGTCATTAAGGTTCTTAAACGAATCG 1003
|||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 963 CAACTTCGGGTCTGGACTCTACAAGTGCTCTAAGTGTTATTAAGGTTCTTAAACGAATCG 1022
Query 1004 CTCAGAGTGGAAGTATGGTGATCATGACTCTTCATCAACCTAGTTACCGTCTTCTTCGAT 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 CTCAGAGTGGAAGTATGGTGATCATGACTCTTCATCAACCTAGTTACCGTCTTCTTCGAT 1082
Query 1064 TGCTTGATCGTCTTCTCTTCTTGTCCCGTGGCCAAACTGTCTTCAGCGGATCGCCTGCCA 1123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1083 TGCTTGATCGTCTTCTCTTCTTGTCCCGTGGCCAAACTGTCTTCAGCGGATCGCCTGCGA 1142
Query 1124 TGCTACCTCGCTTCTTTGCTGAGTTTGGCCACCCAATTCCCGAACACGAAAACCGCACCG 1183
||||||| |||||||| || ||||||||||| |||||||| ||||| || ||||||||||
Sbjct 1143 TGCTACCGCGCTTCTTCGCAGAGTTTGGCCATCCAATTCCTGAACATGAGAACCGCACCG 1202
Query 1184 AGTTCGCTTTGGATTTGATCCGTGAGCTGGAAGGATCAGCTGGTGGAACAAGAAGTTTAG 1243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 AGTTCGCTTTGGATTTGATACGTGAGCTGGAAGGATCAGCTGGTGGAACAAGAAGTTTAG 1262
Query 1244 TTGAATTCAACAAAGGTTTTAGACAGAGGAAAGCAGAGCCAAGAACTCAGACTGGCCTGT 1303
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1263 TTGAATTCAACAAAGGGTTTAGACAGAGGAAAGCAGAGCCAAGAAGTCAGACTGGCTTGT 1322
Query 1304 CCTTAAAAGAAGCCATCAGTGCAAGCATCTCCAAAGGGAAGCTCGTCTCTGGAGCAACGA 1363
||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||| || |
Sbjct 1323 CCTTAAAAGAAGCCATCAGCGCAAGTATCTCTAAAGGCAAGCTCGTCTCTGGAGCGACCA 1382
Query 1364 CAACTAC--A-A-CTCCTGGCTCGAGCCCTGTTTCCACCATTCCTACATTT-GCAAACCC 1418
|||| || | | ||| ||||||||||||||||||||| ||||| || ||| || |||||
Sbjct 1383 CAACAACTCATAGCTC-TGGCTCGAGCCCTGTTTCCACTATTCCAAC-TTTCGCGAACCC 1440
Query 1419 CTTTTGGGTCGAACTCGCGGTTCTAGCCAAACGGTCCATGACTAATTCTCGCAGACAGCC 1478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GTTTTGGGTCGAACTCGCGGTTCTAGCCAAACGGTCCATGACTAATTCTCGCAGACAGCC 1500
Query 1479 TGAACTATTCGGAATACGCCTAGGAGCTGTTTTAGTCACTGGATTCATCTTAGCCACAAT 1538
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1501 TGAACTATTCGGGATACGCCTAGGAGCTGTTTTAGTCACTGGATTCATCTTAGCCACTAT 1560
Query 1539 GTTTTGGCAGCTAGATAATTCCCCCAAAGGAGTCCAAGAACGTCTTGGATGCTTCGCCTT 1598
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1561 GTTTTGGCAGCTAGATAACTCCCCTAAAGGAGTCCAAGAACGTCTTGGATGCTTCGCTTT 1620
Query 1599 TGCAATGTCCACAACGTTCTACACTTGCGCAGATGCCCTCCCCGTTTTCCTCCAAGAACG 1658
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1621 TGCAATGTCCACAACGTTCTACACTTGCGCAGATGCTCTCCCTGTTTTCCTCCAAGAACG 1680
Query 1659 TTTCATTTTCATGAGAGAAACCGCTTACAACGCTTACCGAAGATCCTCCTATGTACTCTC 1718
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1681 TTTCATTTTCATGAGAGAAACTGCTTACAACGCTTACCGAAGATCCTCCTATGTACTATC 1740
Query 1719 TCACTCACTTGTTGCCCTCCCTTCCTTGATCATCCTCTCGCTTGCTTTCGCAGCAATCAC 1778
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1741 TCACTCTCTTGTTGCCCTCCCTTCCTTGATCATCCTCTCGCTTGCTTTTGCAGCGATCAC 1800
Query 1779 GTTTTGGGGTGTGGGCTTAGATGGAGGTCTCATGGGTTTCCTCTTCTACTTCCTAGTAAT 1838
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1801 ATTTTGGGGTGTGGGTTTAGATGGAGGTCTTATGGGTTTCCTCTTCTACTTCCTAGTAAT 1860
Query 1839 CTTAGCCTCTTTCTGGGCTGGAAGCTCATTTGTCACCTTCTTATCAGGCGTTGTCCCACA 1898
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1861 CTTAGCCTCTTTCTGGGCAGGAAGCTCATTCGTCACCTTCTTATCAGGCGTTGTCCCACA 1920
Query 1899 TGTCATGCTCGGTTACACCATTGTGGTAGCCATCTTAGCCTACTTCTTGCTTTTCAGTGG 1958
|| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 1921 CGTTATGCTCGGTTACACCATTGTTGTAGCCATTTTAGCCTATTTCTTGCTTTTCAGTGG 1980
Query 1959 ATTCTTCATCAACCGAGATCGAATCCCTGGCTACTGGATCTGGTTCCATTACATATCTTT 2018
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1981 ATTCTTCATCAACCGAGATCGAATCCCTGGCTACTGGATCTGGTTCCATTACATTTCCTT 2040
Query 2019 AGTCAAATACCCTTACGAAGCTGTGCTACTAAACGAATTCGGTGACCCAACAAAGTGTTT 2078
|||||| || ||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2041 AGTCAAGTATCCTTATGAGGCTGTGCTCCTAAACGAATTCGGTGACCCAACAAAGTGTTT 2100
Query 2079 CGTCAGAGGAGTTCAGATATTCGACAACACACCTCTCGTCGCGGTGCCTCAGGGGATGAA 2138
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2101 CGTCAGAGGAGTTCAGATATTCGACAACACACCTCTGGTCGCGGTGCCTCAGGGGATGAA 2160
Query 2139 AGTTAAGCTTCTAGCAACTATGAGTAAATCACTTGGGATGAGGATCACAAGCTCTACTTG 2198
||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2161 AGTTAGGCTTCTAGCAACTATGAGCAAATCACTTGGAATGAGGATCACAAGCTCTACTTG 2220
Query 2199 CTTGACCACAGGGTATGACATTTTGCAGCAGCAAGGCGTTACGGATCTCACCAAATGGAA 2258
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2221 CTTGACCACAGGATATGACATTTTGCAGCAACAAGGCGTTACGGATCTCACCAAATGGAA 2280
Query 2259 TTGCTTGTGGGTCACGGTCGCTTGGGGCTTCTTCTTTCGAATCTTGTTCTACTTTTCTCT 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 TTGCTTGTGGGTCACGGTCGCTTGGGGCTTCTTCTTTCGAATCTTGTTCTACTTTTCTCT 2340
Query 2319 GCTTTTGGGTAGCAAAAACAAGAGGAGGTAAAAACAAAACTCAGTTTTATCTTATGGAGG 2378
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2341 GCTTTTGGGTAGCAAGAACAAGAGGAGGTAAAAACAAAACTCAGTTTGATCTTATGGAGG 2400
Query 2379 ACTGAtttgaaactttggtttacctttgtttgttttctgtatttttcttttatttctttc 2438
|||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2401 ACTGGTTTGAAACTT-GATTTACCTTTGTTTGTTTTCTGTATTTTTCTTTTATCTCTTTG 2459
Query 2439 ttgtatattcttatat--GTGGTTGATAAATTGTTGAATTGGAGCTCAACT 2487
|||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 2460 TTGTATATTCTTATATATGTGGTTGATAAATTGTTGAATTGGAGCCCAACT 2510
> AT3G55110.1 | Symbols: | ABC-2 type transporter family protein
| chr3:20424550-20427377 REVERSE LENGTH=2533
Length=2533
Score = 348 bits (188), Expect = 2e-94
Identities = 660/880 (75%), Gaps = 64/880 (7%)
Strand=Plus/Plus
Query 511 GAGGCTAGAGACGGAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCCGGAAAATCGACA 570
|||||| | |||||||| || || || || || || | ||| || |||||||||| ||
Sbjct 482 GAGGCTCGTGACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGCCGGAAAATCCACG 541
Query 571 CTGATCGATGCATTAG-C-TAATCGAATCGCTAAAGGA-AGCTTGAAAGGAAAC-GTAAC 626
|||| || ||||||| | || || | || |||| ||||||||||| || |||||
Sbjct 542 TTGATAGACGCATTAGCCGGAA--GAGTGGC-GGAGGATAGCTTGAAAGG-CACGGTAAC 597
Query 627 TCTAAACGGAG---AAGTTCT-CAAT-TCGAAAATGCAGAAAGCCATCTCAGCTTATGTG 681
||||||||||| ||||| | |||| ||| | || ||||| || || || ||||||
Sbjct 598 TCTAAACGGAGAAAAAGTTTTGCAATCTCG--ATTGTTGAAAGTGATATCGGCGTATGTG 655
Query 682 ATGCAAGACGATCTTCTTTTTCCGATGCTTACAGTTGAAGAAACCTTAATGTTTGCCGCC 741
||||||||||||||||||||||||||||| || ||| |||||||| ||||||| || ||
Sbjct 656 ATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCC 715
Query 742 GAGTTTCGTCTTCCGCGAAGCCTTT-CG-AAATCAAAGAAGA-GTCTCCGTGTCCAAGCT 798
||||||||||| ||| |||| ||| | ||||| ||||||| | | |||| || |
Sbjct 716 GAGTTTCGTCTCCCGAGAAG--TTTGCCTAAATCGAAGAAGATGGAGC-GTGTTGAAACC 772
Query 799 TTGATTGATCAATTAGGACTTAGAAACGCAGCAAATACCGTGATCGGAGATGAAGGCCAC 858
| ||||| ||| |||| ||||||||||| || |||| || |||||||||||||| ||
Sbjct 773 CTAATTGACCAACTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGGACAT 832
Query 859 CGTGGAATCTCTGGAGGAGAGAGGCGGCGAGTTTCAATTGGAATTGATATCATCCATGAT 918
|||||| | ||||| |||||| | ||||| || ||||| ||||||||||| || || |||
Sbjct 833 CGTGGAGTATCTGGCGGAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACACGAT 892
Query 919 CCGATTCTGCTTTTCCTCGATGAACCAACCTC-GGGTTTGGACTCTAC-AAGTGC-TCTA 975
|| || || || |||||||| |||||||| || ||||| | |||| || || ||| | ||
Sbjct 893 CCTATCCTCCTCTTCCTCGACGAACCAACGTCAGGGTTAG-ACTCCACCAA-TGCGTTTA 950
Query 976 AGTGTCATTAAGGTTCTT-AAACGAATCGCTCAGAGTGGAAGTATGGTGATCATGACTCT 1034
| || | ||||| || |||||||| ||||||||||| ||| | || || ||| | |
Sbjct 951 TG-GTGGTGCAGGTT-TTGAAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGAT 1008
Query 1035 TCATCAACCTAGTT-ACCGTCTTC-TTCGATTGCTTGATCGTCTTCTCTTCTTGTC-C-C 1090
|||||||||||| || || | | || | ||||||||||| ||| || |||| || | |
Sbjct 1009 CCATCAACCTAGTGCAC-GTAT-CATTGGTTTGCTTGATCGGCTTATCATCTTATCTCAC 1066
Query 1091 GTGGCCAA-ACTGTCTTCAGCGGATCGCCTGCCA-TGCTACCT-CGCTTCTT-TGCTGAG 1146
| || || | ||| |||| ||||| || | | | || ||| || ||||| | | |
Sbjct 1067 G-GG--AAGAGTGTGTTCAATGGATCTCCGGTTAGT-CTTCCTTCG-TTCTTCTCCAGC- 1120
Query 1147 TTTGGCCA-CCCAATTCCCGA-ACACGAAAACCGCACCGAGTTCGCT-TTGGATTTGATC 1203
||||||| |||| |||| || | | |||||| ||| |||||||| ||| || | ||
Sbjct 1121 TTTGGCCGTCCCA-TTCCAGAGAAA-GAAAACATCACAGAGTTCGCACTTG-ATGTCATT 1177
Query 1204 CGTGAGCTGGAAGGATCAGCTGGTGGAACAAGA-AGTTTAGTTGAATTCAAC-AAAGGTT 1261
|| ||||| |||||||| ||| ||||| ||| | |||||| ||||||||| ||| ||
Sbjct 1178 CGAGAGCTTGAAGGATCCTCTGAAGGAACCAGAGA-TTTAGTAGAATTCAACGAAAAGTG 1236
Query 1262 TTAGACAGAGG-AAA--GC-AGAGCCAAGAACTCAGACTGGCCTGTC-CTTAAAAGAAGC 1316
| ||||| ||| || ||||||| ||| || | | || | || || |||||||||
Sbjct 1237 GCA-ACAGAACCAAACTGCTAGAGCCAC-AACACAAAGTCGCGTATCTCT-AAAAGAAGC 1293
Query 1317 CATCAG-TGCAAGCATCTCCAAAGGGAAGCTCGTCTCTGG 1355
|||| | |||||| | || | |||||| || ||||||||
Sbjct 1294 CATC-GCTGCAAGTGTTTCTAGAGGGAAACTAGTCTCTGG 1332
> AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex homolog
19 | chr3:20433878-20436390 REVERSE LENGTH=2513
Length=2513
Score = 327 bits (177), Expect = 2e-88
Identities = 483/628 (77%), Gaps = 31/628 (5%)
Strand=Plus/Plus
Query 505 TCCGGAGAGGCTAGAGACGGAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCCGGAAAA 564
|||||||||||| ||||| || || || || || ||||| |||||||| | ||||||
Sbjct 412 TCCGGAGAGGCTTCTGACGGCGATATCCTCGCCGTTCTCGGTGCAAGTGGAGCAGGAAAA 471
Query 565 TCGACACTGATCGATGCATTAGCTAATCGAATCGCTAAAGGAAGCTTGAAAGGAAAC-GT 623
|| || ||||||||||| |||| || | ||| | |||||||||| ||| | ||
Sbjct 472 TCAACGTTGATCGATGCACTAGCGGGGAGAGTTGCTGAGGGAAGCTTGAGAGG-CTCTGT 530
Query 624 AACTCTAAAC-G-GAG-AAGTTCT-CAAT-TCGAAAATGCAGAAAGCCATCTCAGCTTAT 678
|||||||||| | ||| ||||| | |||| ||| | || ||||| || || || |||
Sbjct 531 AACTCTAAACGGAGAGAAAGTTTTGCAATCTCG--ATTGTTGAAAGTTATATCGGCGTAT 588
Query 679 GTGATGCAAGACGATCTTCTTTTTCCGATGCTTACAGTTGAAGAAACCTTAATGTTTGCC 738
|| ||||||||||||||||||||||||||||| || ||| |||||||| ||||||| ||
Sbjct 589 GTTATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCT 648
Query 739 GCCGAGTTTCGTCTTCCGCGAAGCCTT-TCGAAATCAAAGAAGA-GTCTCCGTGTCCAAG 796
||||||||||||| ||| |||| || || || || ||||||| | | |||| |||
Sbjct 649 TCCGAGTTTCGTCTCCCGAGAAGT-TTGTCTAAGTCGAAGAAGATGGAGC-GTGTTGAAG 706
Query 797 CTTTGATTGATCAATTAGGACTTA-GAAACGCAGCAAATACCGTGATCGGAGATGAAGGC 855
| | |||||||||||||| ||| ||||||| || || || || |||||||| |||||
Sbjct 707 CCCTAATTGATCAATTAGGG-TTAAGAAACGCGGCGAACACGGTAATCGGAGACGAAGGA 765
Query 856 CACCGTGGAATCTCTGGAGGAGAGAGGCGGCGAGTTTCAATTGGAATTGATATCATCCAT 915
||||||||| | |||||||||||||| ||||| |||||||| ||||| ||||| || ||
Sbjct 766 CACCGTGGAGTTTCTGGAGGAGAGAGACGGCGCGTTTCAATCGGAATCGATATTATACAC 825
Query 916 GATCCGATTC-TGCTT-TTCCTCGATGAACCAACCTCGGGTTTGGACTCTACAAGTGC-T 972
||||| || | | ||| |||||||| |||||||| ||||| |||| ||||||| || |
Sbjct 826 GATCCTAT-CGT-CTTGTTCCTCGACGAACCAACGTCGGGGCTGGATTCTACAAACGCGT 883
Query 973 CTAAGTGTCATT-AAGGTTCTT-AAACGAATCGCTCAGAGTGGAAGTATGGTGATCATGA 1030
|| | || | ||| || || |||||||| ||||| ||||| ||||| || || |||
Sbjct 884 TTATG-GTGGTGCAAG-TT-TTGAAACGAATTGCTCAAAGTGGCAGTATCGTAATTATGT 940
Query 1031 CTCTTCATCAACCTAGTTAC-CGTCTTCTTCGA-TTGCTTGATCGTCTTCTC-TTCTTGT 1087
| | |||||||||||| | || | | | || ||||||||||| ||| || |||| |
Sbjct 941 CGATCCATCAACCTAGTG-CTCGAAT-CGTGGAGTTGCTTGATCGGCTTATCATTCTA-T 997
Query 1088 CCCGTGGCCAAACTGTCTTCAGCGGATC 1115
| |||||| ||| ||| |||| |||||
Sbjct 998 CTCGTGGCAAAAGTGTGTTCAATGGATC 1025
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123410679780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5