BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488237
Length=2205
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14060.1 | Symbols: CARAB-AK-LYS | Aspartate kinase family p... 3374 0.0
AT3G02020.1 | Symbols: AK3 | aspartate kinase 3 | chr3:340546-3... 1524 0.0
> AT5G14060.1 | Symbols: CARAB-AK-LYS | Aspartate kinase family
protein | chr5:4535401-4539193 FORWARD LENGTH=2229
Length=2229
Score = 3374 bits (1827), Expect = 0.0
Identities = 2095/2219 (94%), Gaps = 40/2219 (2%)
Strand=Plus/Plus
Query 1 AAAGATGGCGACATTATTTCAT-GATTAACACAAATGTAC-AA-TTTAGTAGAGTGGCTT 57
||||||| | |||||||||||| |||||||||||| |||| || ||||||||||||||||
Sbjct 2 AAAGATGTCAACATTATTTCATGGATTAACACAAA-GTACAAATTTTAGTAGAGTGGCTT 60
Query 58 ACTAATAGCTGAAAGGGTATCTCGATCCAGAGATTGAATCTGAACCGTCCATTCTTGGAA 117
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 61 ACTAATAGCTGAAAGGGTATCTCGACCCAGAGATTGAATCTGAACCGTCCATTCTGGGAA 120
Query 118 GGGCAAACAGAGTAGCGTTTGTGTCTCCTCACGTTCTCTGCCTTCTCTAATAATG-GTCT 176
||||||||| | || ||||||| | |||||||||||| ||||||||||| | | ||||
Sbjct 121 GGGCAAACAAAACAGTGTTTGTG--T-CTCACGTTCTCTTCCTTCTCTAAT-A-GAGTCT 175
Query 177 TAAGCCGCTTTTTCACT-CTTcaaaaacaaaaacaaaaacaaaaaaaaTTAGTATTTCCT 235
||||||||||||||||| ||| ||| | |||| |||||| | | || ||||||||
Sbjct 176 TAAGCCGCTTTTTCACTCCTT--AAACCCAAAA-AAAAAC----ATTAGTACTATTTCCT 228
Query 236 TCGGAGCCTGGCCGGCGAATCCGATC-GGTCGTTTCAGCTGTGTCCGAAGGAAAGTTCCA 294
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 229 TCGGAGCCTGGCCGGCGAATCCGA-CAGGTCGTTTCAGCTGTGTCCGAAGGAAAGTTCCA 287
Query 295 ATTTTTA-CTGTTTTTATTCACGGAAATCCAGTTAAGGTTTCCACATTGCACAGCTGTAC 353
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 ATTTTTATCTGTTTTTCTTCACGGAAATCCAGTTAAGGTTTCCACATTGCACAGCTGTAC 347
Query 354 CATTTGTCGAGATCACAACACTCAAGTCTCTTAGATTTAGCAAGCTTCAATGACGGCTTC 413
||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct 348 CATTTGTCGAGATCACAACACGCAAGTCTCTTAGATTTAGCAAGCTT--AT---GGCTTC 402
Query 414 ATTGCACTTGTACGGAGTTAAAGCTCCAGTGCTTGCGTTAAGTTCAAAGAGGCTTGATTT 473
|||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||| ||
Sbjct 403 ATTGCAGTTGTACGGAGTTAAAACTCCAGGGCTTGCTTTAAGTTCAAAGAGGCTTGAGTT 462
Query 474 TGGC-TCAAAGGGGACTA-CTTTTTCAGTTACATTGCCTTCAAGTAGTGCAGTTTTTAGA 531
| || ||||||||| | | |||||||||||| ||||| ||||||||||| || ||||||
Sbjct 463 T-GCTTCAAAGGGGGC-ATGTTTTTCAGTTACGTTGCCCTCAAGTAGTGCTGTCTTTAGA 520
Query 532 GCCGTAGAGCATTCTTGTAGGAATATAGCTTTGAGAGTTAGTTGTGAAGATGTAAGAGTC 591
| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||
Sbjct 521 GACGTAGAGCATTCTTGTAGGAATATAGGTTTGAGAGTTAGTTGTGAAGCTCTAAGAGTC 580
Query 592 GATTTGCTTGAAAGAAAAGAGCCCGAGACTTGCAATTCAAGCGCAACTGGCAAAGAGTTG 651
||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||||||
Sbjct 581 GATTTGCTTCAAAGAAAAGAGCCTGAGACGTGCGATTCAAGCGGAACTGGCAAAGAGTTG 640
Query 652 ACATGTGTAATGAAATTCGGCGGTTCATCAGTGGAATCAGCAGAGAGGATGAAAGAAGTT 711
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 ACATGTGTAATGAAATTTGGCGGTTCATCAGTGGAATCAGCAGAGAGGATGAAAGAAGTT 700
Query 712 GCCAATCTTATACTCAGCTTTCCAGATGAGAGGCCCGTCATTGTGTTATCAGCAATGGGA 771
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 701 GCCAATCTTATACTCAGCTTTCCAGATGAGAGGCCCGTCATTGTGCTATCAGCAATGGGA 760
Query 772 AAGACGACTAATAAGCTTTTGAAGGCTGGAGAGAAGGCTGTTACTTGCGGTGTCACTAAC 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 AAGACGACTAATAAGCTTTTGAAGGCTGGAGAGAAGGCTGTTACTTGCGGTGTCACTAAC 820
Query 832 GTAGAAAGTATTGAAGAATTGAGCTTTATAAAGGAACTCCATTTAAGAACTGCTCATGAG 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 GTAGAAAGTATTGAAGAATTGAGCTTTATAAAGGAACTCCATTTAAGAACTGCTCATGAG 880
Query 892 CTTGGAGTGGAAACAACGGTTATTGAAAAACACCTAGAAGGACTACACCAGCTTCTTAAA 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 881 CTTGGAGTGGAAACAACGGTTATTGAAAAACACCTAGAAGGACTACACCAGCTTCTCAAA 940
Query 952 GGCATATCAATGATGAAAGAATTAACCTTACGTACAAGGGACTACTTGGTTTCATTTGGA 1011
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 941 GGCATATCAATGATGAAAGAGCTAACCTTACGCACAAGGGACTACTTGGTTTCATTTGGA 1000
Query 1012 GAGTGCATGTCCACTAGGCTTTTCTCTGCGTATCTCAATAAAATTGGCCACAAAGCGCGT 1071
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 GAGTGCATGTCCACAAGGCTTTTCTCTGCGTATCTCAATAAAATTGGCCACAAAGCGCGT 1060
Query 1072 CAATATGATGCATTTGAGATCGGGTTTATTACCACAGACGACTTTACAAATGCTGATATA 1131
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1061 CAATATGATGCATTTGAGATCGGATTTATCACCACAGACGACTTTACTAATGCTGATATA 1120
Query 1132 CTTGAAGCAACGTACCCTGCCGTCTCAAAAACACTAGTTGGCGATTGGAGCAAGGAAAAT 1191
||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1121 CTTGAAGCAACATACCCTGCCGTCTCAAAAACACTTGTTGGCGACTGGAGCAAGGAAAAT 1180
Query 1192 GCAGTCCCTGTTGTTACTGGCTTCCTCGGAAAGGGATGGAGGTCTTGTGCTATAACTACG 1251
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 1181 GCAGTCCCTGTTGTTACTGGCTACCTCGGAAAGGGATGGAGGTCTTGTGCTATCACTACG 1240
Query 1252 TTGGGTAGGGGTGGCAGCGACTTGACGGCTACAACGATTGGGAAAGCGTTAGGACTGCGG 1311
|||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||
Sbjct 1241 CTGGGTAGGGGTGGCAGTGATTTGACAGCTACAACGATTGGGAAAGCGCTAGGACTGCGG 1300
Query 1312 GAAATTCAGGTTTGGAAGGATGTAGATGGAGTTTTGACTTGTGATCCTAACATATATCCT 1371
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1301 GAAATTCAGGTTTGGAAAGATGTGGATGGAGTTTTGACTTGTGATCCTAACATATATCCT 1360
Query 1372 GGAGCTCAATCTGTTCCATACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGT 1431
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 GGAGCTCAATCTGTTCCGTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGT 1420
Query 1432 GCCCAGGTGTTGCATCCACTGTCTATGAGGCCAGCAAGAGATGGCGACATTCCTGTAAGG 1491
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1421 GCCCAGGTGTTGCATCCACTGTCTATGAGGCCAGCAAGAGATGGCGACATTCCTGTGAGG 1480
Query 1492 GTGAAGAACTCGTACAACCCCACTGCTCCAGGAACTGTCATCACCAGATCAAGAGACATG 1551
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GTTAAGAACTCGTACAACCCCACTGCTCCAGGAACTGTCATCACCAGATCAAGAGACATG 1540
Query 1552 AGTAAGGCCGTGCTGACAAGCATTGTTCTGAAACGCAATGTGACCATGTTGGACATAGCA 1611
|||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1541 AGTAAGGCTGTGCTAACCAGCATTGTTCTGAAACGTAATGTGACCATGTTGGACATAGCA 1600
Query 1612 AGCACCCGTATGCTTGGCCAGTATGGTTTCCTTGCCAAGGTGTTTACCACATTTGAAGAT 1671
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1601 AGCACCCGTATGCTTGGCCAATATGGTTTCCTTGCCAAGGTGTTTACCACATTTGAAGAT 1660
Query 1672 TTAGGCATATCGGTCGATGTTGTGGCAACAAGTGAAGTTAGTATATCATTGACATTGGAT 1731
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661 TTAGGTATATCGGTTGATGTTGTGGCAACAAGTGAAGTTAGTATATCATTGACATTGGAT 1720
Query 1732 CCAGCAAAGCTCTGGGGTAGAGAGTTAATTCAGCGGGTAAATGAACTGGATAATTTGGTG 1791
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1721 CCAGCAAAGCTCTGGGGTAGAGAGTTAATTCAGCGAGTAAATGAACTGGATAATTTGGTG 1780
Query 1792 GAAGAGCTAGAAAAGATTGCTGTTGTGAAACTGCTGCAGCGCAGATCAATCATCTCTCTC 1851
||||||||||| |||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 1781 GAAGAGCTAGAGAAGATTGCTGTTGTGAAACTACTTCAACGCAGATCAATCATCTCTCTC 1840
Query 1852 ATAGGAAATGTTCAGAAATCCTCACTCATATTAGAGAAGGTGTTCCAAGTACTTAGAAGC 1911
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1841 ATAGGAAATGTTCAGAAATCCTCACTCATATTAGAGAAGGTGTTCCAAGTATTTAGAAGC 1900
Query 1912 AATGGAGTGAATGTGCAGATGATCTCGCAGGGTGCATCTAAGGTAAACATCTCGTTGATA 1971
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1901 AATGGAGTGAATGTGCAGATGATCTCGCAGGGTGCATCTAAGGTAAACATCTCATTGATA 1960
Query 1972 GTGAATGATGAAGAGGCAGAGCAATGTGTGAGGGCTCTCCACTCCGCCTTCTTTGAGACC 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1961 GTGAATGATGAAGAGGCAGAGCAATGTGTGAGGGCTCTCCACTCCGCCTTCTTTGAGACC 2020
Query 2032 GATTCTTAGTGCAACACAGAGC-C--ATTTCTCTCCTTCAACTCTGCTTCTGTGCGTAGT 2088
||| |||||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct 2021 GATCCTTAGTGCAACACAGAGCACCCATCTCTCTCCTTCAACTCTGCTTCTGTGCGTAGT 2080
Query 2089 TTAATGCTAAGAATGTGTTAAGACTTGGAACAACTTCACATTCttgttcttattgttgtt 2148
|||||||||||||||||| |||||||||||| | |||| |||||||| | |||||||||
Sbjct 2081 TTAATGCTAAGAATGTGTCAAGACTTGGAACTATTTCAAATTCTTGTCC--ATTGTTGTT 2138
Query 2149 gtttctgttgttgttgttgttgtGATACAATA-A-CATAATCTGAGCCAAAGCCTATAA 2205
||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct 2139 GTT---GTTGTTGTTGTTGTTGTGATACAATACATCATAATTTGAGCCAAAGCCTATAA 2194
> AT3G02020.1 | Symbols: AK3 | aspartate kinase 3 | chr3:340546-343835
REVERSE LENGTH=2195
Length=2195
Score = 1524 bits (825), Expect = 0.0
Identities = 1384/1651 (84%), Gaps = 50/1651 (3%)
Strand=Plus/Plus
Query 402 AATGACGGCTTCATTGCACTTGTACGGAGTTAAAGCTCCAGTGCTTGCGTTAAGTTCAAA 461
|||| |||||||| |||| || |||||||||||| | |||| ||||| |||| |||||
Sbjct 322 AATGGCGGCTTCAATGCAGTTCTACGGAGTTAAAACACCAGAACTTGCCTTAAACTCAAA 381
Query 462 GAGGCTTGATTTTGGCTCAAAGGGGACT--ACTTTTTCAGTTACAT--TG-CCTTCAAG- 515
||| |||| ||| ||||||||||| || || || |||| || | || || || |
Sbjct 382 AAGGATTGAGTTTAGCTCAAAGGGG-CTCAAC-TTCTCAG-CAC-TCGTGTCC-TC-TGC 435
Query 516 TAGTGCAGTT-TTTAGAGCCGTAGAGCATTCTTGTAGGAATATAGCTTTGAGAGTTAGTT 574
| ||| | || | |||| |||||| | |||||||| ||| || ||| ||||||||| ||
Sbjct 436 TCGTGTA-TTCTCTAGAAACGTAGATCGTTCTTGTAAGAACATCGCTCTGAGAGTTACTT 494
Query 575 GTGAAGATGTAAGAGTCGATTTGCTTGAAAGAAAAGAGCC-C-GAGACTTGCAA-TTCAA 631
|||||| | |||||| || |||| || || ||| |||| | ||||||| ||| || ||
Sbjct 495 GTGAAGCGGGAAGAGTGGAGCTGCTAGAGAG-AAA-AGCCTCAGAGACTTTCAAGTT-AA 551
Query 632 GCGCAACTG-GCAAAGAGTTGACATGTGTAATGAAATTCGGCGGTTCATCAGTGGAATCA 690
| ||||| | ||| | ||||| ||||||||||||||||| || |||||||||| ||||
Sbjct 552 ACAAAACTGAG-AAAAAATTGACCTGTGTAATGAAATTCGGTGGCTCATCAGTGGCATCA 610
Query 691 GCAGAGAGGATGAAAGAAGTTGCCAATCTTATACTCAGCTTTCCAGATGAGAGGCCCGTC 750
||||| ||||||| | |||||||||| || ||||||||||| |||||||||| ||| ||
Sbjct 611 GCAGAAAGGATGATACAAGTTGCCAAACTCATACTCAGCTTCCCAGATGAGAAGCCTGTT 670
Query 751 ATTGTGTTATCAGCAATGGGAAAGACGACTAATAAGCTTTTGAAGGCTGGAGAGAAGGCT 810
||||| |||||||||||| |||||| || ||||||||||||| |||||| |||||||||
Sbjct 671 GTTGTGCTATCAGCAATGGCAAAGACCACCAATAAGCTTTTGATGGCTGGGGAGAAGGCT 730
Query 811 G-TTACTTGCGGTGTCACTAACGTAGAAAGTATTGAAGAATTGAGCTTTATAAAGGAACT 869
| || | ||||||||||| ||||| || | ||| ||||| ||||||| ||||||||||||
Sbjct 731 GTTTGC-TGCGGTGTCACCAACGTCGACACTATCGAAGAGTTGAGCTATATAAAGGAACT 789
Query 870 CCATTTAAGAACTGCTCATGAGCTTGGAGTGGAAACAACGGTTATTGAAAAACACCTAGA 929
|||| |||| ||||||||||||||||||||||||||| | ||||||| | |||| |||||
Sbjct 790 CCATATAAGGACTGCTCATGAGCTTGGAGTGGAAACAGCAGTTATTGCAGAACATCTAGA 849
Query 930 AGGACTACACCAGCTTCTTAAAGGCATATCAATGATGAAAGAATTAACCTTACG-TACAA 988
|||||| | ||||||||||||||| | |||||||||| |||||||| ||||| | |||
Sbjct 850 AGGACTGGAACAGCTTCTTAAAGGCGTCGCAATGATGAAGGAATTAACTTTACGCT-CAA 908
Query 989 GGGACTACTTGGTTTCATTTGGAGAGTGCATGTCCACTAGGCT-TTTCTCTGCGTATCTC 1047
| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||
Sbjct 909 GAGACTACTTGGTTTCATTTGGAGAATGCATGTCCACTAGGCTATTT-GCTGCGTACCTG 967
Query 1048 AATAAAATTGGCCACAAAGCGCGTCAATATGATGCATTTGAGATCGGGTTTATTACCACA 1107
|| |||||||| |||||||| || || ||||||||||||||||||||| |||| ||||||
Sbjct 968 AACAAAATTGGGCACAAAGCACGACAGTATGATGCATTTGAGATCGGGATTATCACCACA 1027
Query 1108 GACGACTTTACAAATGCTGATATACTTGAAGCAACGTACCCTGCCGTCTC-AAAAACACT 1166
|| ||||| || ||||||||||| ||||| ||||| ||||| || || || ||||| |
Sbjct 1028 GATGACTTCACTAATGCTGATATTCTTGAGGCAACATACCCGGCGGTTTCGAAAAA-GTT 1086
Query 1167 AGTTGGCGATTGGAGCAAGGAAAATGCAGTCCCTGTTGTTACTGGCTTCCTCGGAAAGGG 1226
| |||| || |||||||||||||||||| |||| ||||| || |||||||| ||||||||
Sbjct 1087 ACTTGGTGACTGGAGCAAGGAAAATGCACTCCCCGTTGTCACAGGCTTCCTTGGAAAGGG 1146
Query 1227 ATGGAGGTCTTGTGCTATAACTACG-TTGGGTAGGGGTGGCAGCGACTTGACGGCTACAA 1285
|||||| ||||||||| |||||||| || ||||| || || ||||| ||||| || ||||
Sbjct 1147 ATGGAGATCTTGTGCTGTAACTACGCTT-GGTAGAGGAGGTAGCGATTTGACTGCAACAA 1205
Query 1286 CGATTGGGAAAGCGTTAGGACTGCGGGAAATTCAGGTTTGGAAGGATGTAGATGGAGTTT 1345
|||| ||||| || ||||| ||||||| || ||||||||||| ||||| ||||||||||
Sbjct 1206 CGATCGGGAAGGCTTTAGGTTTGCGGGAGATCCAGGTTTGGAAAGATGTGGATGGAGTTT 1265
Query 1346 TGACTTGTGATCCTAACATATA-TCCTGGAGCTCAATCTGTTCCATACTTAACGTTCGAT 1404
||||||||||||||||||| || | | ||||||||| |||||||| |||| || || |||
Sbjct 1266 TGACTTGTGATCCTAACATTTACTGC-GGAGCTCAACCTGTTCCACACTTGACATTTGAT 1324
Query 1405 GAGGCAGCTGAGCTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTGTCTATGAGGCCA 1464
||||| ||||| ||||||||||||||||||||||||||||||||||| || ||| | |||
Sbjct 1325 GAGGCTGCTGAACTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTTTCCATGCGCCCA 1384
Query 1465 GCAAGAGATGGCGACATTCCTGTAAGGGTGAAGAACTCGTACAACCCCACTGCTCCAGGA 1524
|| |||| || |||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 1385 GCGCGAGAAGGTAACATTCCTGTAAGGGTTAAGAACTCTTACAATCCCACTGCTCCAGGA 1444
Query 1525 ACTGTCATCACCAGATCAAGAGACATGAGTAAGGCCGTGCTGACAAGCATTGTTCTGAAA 1584
||||||||||||||||||||||||||||| ||||| || |||| ||||| |||||||||
Sbjct 1445 ACTGTCATCACCAGATCAAGAGACATGAGCAAGGCTGTATTGACCAGCATCGTTCTGAAA 1504
Query 1585 CGCAATGTGACCATGTTGGACAT-AGCAAGCACCCGTATGCTTGGCCAGTATGGTTTCCT 1643
|| ||||| |||||||||||||| | | |||||||||||||| ||||| |||||||||||
Sbjct 1505 CGTAATGTCACCATGTTGGACATCA-CTAGCACCCGTATGCTCGGCCAATATGGTTTCCT 1563
Query 1644 TGCCAAGGTGTTTACCACATTTGAAGATTTAGGCATATCGGTCGATGTTGTGGCAACAAG 1703
||||||||||||| ||||||||||| | || |||||||| || |||||||| ||||| ||
Sbjct 1564 TGCCAAGGTGTTTTCCACATTTGAAAAGTTGGGCATATCTGTGGATGTTGTTGCAACCAG 1623
Query 1704 TGAAGTTAGTATATCATTGACATTGGATCCAGCAAAGCTCTGGGGTAGAGAGTTAATTCA 1763
|||||||| || || |||||||||||||| ||||| |||| | ||||||||||||||
Sbjct 1624 CGAAGTTAGCATTTCTTTGACATTGGATCCTTCAAAGTTCTGTAGCAGAGAGTTAATTCA 1683
Query 1764 GCGGGTAAATGAACTGGATAATTTGGTGGAAGAGCTAGAAAAGATTGCTGTTGTGAAA-C 1822
| | | | || ||| | ||||||| || || || |||||||||||||| ||| |
Sbjct 1684 ACACG-A---G--CTTGATCAGGTGGTGGAGGAACTTGAGAAGATTGCTGTTGT-AAATC 1736
Query 1823 TGCTGC-AGCGCAGATCAATCATCTCTCTCATAGGAAATGTTCAGAAATCCTCACTCATA 1881
|||| | | | ||||||||| ||||||||||| ||||||||||||| ||| ||| |||||
Sbjct 1737 TGCTTCGA-CACAGATCAATTATCTCTCTCATCGGAAATGTTCAGAGATCATCATTCATA 1795
Query 1882 TTAGAGAAGGTG-TTCCAAGTACTTAGAAGCAATGG-AGTGAATGTGCAGATGATCTCGC 1939
|||||||||| | |||| ||||||| ||| |||||| | | ||||| ||||||||||| |
Sbjct 1796 TTAGAGAAGG-GCTTCCGAGTACTTCGAACCAATGGGATT-AATGTCCAGATGATCTCCC 1853
Query 1940 AGGGTGCATCTAAGGTAAACATCTCGTTGATAGTGAATGATGAAGAGGCAGAGCAATGTG 1999
| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||| ||||
Sbjct 1854 AAGGTGCATCTAAGGTAAACATCTCACTGATAGTGAATGATGATGAGGCGGAGCATTGTG 1913
Query 2000 TGAGGGCTCTCCACTCCGCCTTCTTTGAGAC 2030
||| |||||||||||| ||||||||||||||
Sbjct 1914 TGAAGGCTCTCCACTCGGCCTTCTTTGAGAC 1944
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109386987555
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5