BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488253
Length=1541
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydroge... 2436 0.0
AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate d... 1818 0.0
AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydroge... 1114 0.0
> AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydrogenase
1 | chr5:4576202-4578402 FORWARD LENGTH=1539
Length=1539
Score = 2436 bits (1319), Expect = 0.0
Identities = 1473/1545 (95%), Gaps = 20/1545 (1%)
Strand=Plus/Plus
Query 2 CCaaaaaaaaTGGCGGCGTTTTTGCAAACGAACATCCGTCTGAATTCGATCAAGATCGTC 61
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 10 CCAAAAAAAATGGCGGCGTTTTTGCAAACGAACATCAGTCTGAATGCGATCAAGATCGTC 69
Query 62 CC-GGGAAGATACAGTGCTCTCACCGATCATCAGTTTCGTGCGCCGTATCGAATAAGGTG 120
|| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 70 CCGGGGAA-ATACAGTTCTCTCACCGATCATCAGTTTCGTGCGCCGTATCGAATTAGGTG 128
Query 121 CGCTGCGGCTTCACCAGGGAAAAAACGGTATAATATCGCTCTGCTTCCCGGCGACGGTAT 180
||| || |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 129 CGCCGCCGCTTCACCTGGGAAAAAACGGTATAACATCGCTCTGCTTCCCGGAGACGGTAT 188
Query 181 TGGTCCAGAAGTTATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATCTCTCGAAGG 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 CGGTCCAGAAGTTATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATCTCTCGAAGG 248
Query 241 ACTGGAGTTTGATTTCCAGGAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTCGGAGT 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 249 ACTGGAGTTTGATTTCAAGGAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTTGGAGT 308
Query 301 TCCAATGCCTGAGGAAACTTTCACGGCTGCAAAACAATCTGATGCCATTCTTCTTGGAGC 360
|||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 309 TCCATTGCCGGAGGAAACTTTCACGGCTGCAAAACTATCTGATGCCATTCTTCTTGGAGC 368
Query 361 TATTGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGCTCTGTT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 TATTGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGCTCTGTT 428
Query 421 TTACCTTCGAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACA 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 TTACCTTAGAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACA 488
Query 481 GCTAGTTGATGCTTCCACACTGAAGAAAGAAGTAGCAGAAGGTGTTGATATGATGATTGT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 GCTAGTTGATGCTTCCACACTGAAGAAAGAAGTAGCAGAAGGTGTTGATATGATGATTGT 548
Query 541 TAGGGAGCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGTATCAAGATCAATGAAAA 600
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct 549 TAGGGAGCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAATGAAAA 608
Query 601 TGGCGAAGAAGTCGGCATTAGTACAGAGATCTATGCTGCTCACGAGGTACTAAACCTTGA 660
|||||||||||||||| |||||||||||||||| ||||||||||| | | ||||
Sbjct 609 TGGCGAAGAAGTCGGCGTTAGTACAGAGATCTACGCTGCTCACGA-G------A--TTGA 659
Query 661 CAGAATTGCTCGTGTTGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCGGT 720
||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 660 CAGAATTGCTCGTGTAGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAACTTTGTTCTGT 719
Query 721 CGACAAAGCCAATGTGTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGC 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGACAAAGCCAATGTGTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGC 779
Query 781 CTCTGAATATCCTGATGTTGAACTATCACATATGTATGTCGATAATGCTGCAATGCAGCT 840
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CTCTGAATATCCAGATGTTGAACTATCACATATGTATGTCGATAATGCTGCAATGCAGCT 839
Query 841 TATCCGTGACCCGAAACAGTTTGACACAATCGTCACCAATAACATTTTCGGTGATATATT 900
||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 840 TATTCGTGACCCGAAACAGTTTGACACAATCGTTACCAATAACATTTTTGGTGATATATT 899
Query 901 GTCTGATGAAGCTTCAATGATCACTGGAAGCATTGGAATGCTTCCATCTGCAAGTCTCGG 960
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 900 GTCTGATGAAGCTTCAATGATCACTGGAAGCATTGGAATGCTTCCATCTGCTAGTCTCGG 959
Query 961 TGAATCGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TGAATCGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACA 1019
Query 1021 AGACAAAGCAAACCCATTGGCCACCATTCTCAGCGCGGCGATGCTTCTGAAGTATGGACT 1080
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 AGACAAGGCAAACCCATTGGCCACCATTCTCAGCGCGGCGATGCTTCTGAAGTATGGACT 1079
Query 1081 TGGAGAAGAAAAGGCTGCAAAGAGGATTGAAGACGCGGTCGTGGATGCTCTGAACAAAGG 1140
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1080 TGGAGAAGAAAAGGCTGCAAAGAGGATTGAAGACGCTGTCGTGGATGCTCTGAACAAAGG 1139
Query 1141 GTTCAGAACCGGAGACATCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGG 1200
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1140 GTTCAGAACCGGAGACATCTACTCCCCTGGAAATAAACTGGTGGGATGCAAGGAAATGGG 1199
Query 1201 TGAGGAGGTTCTCAAATCAGTGGAATCCAAAGTTCCAGCTACTGTTTAAGTTTATTGATG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 TGAGGAGGTTCTCAAATCAGTGGAATCCAAAGTTCCAGCTACTGTTTAAGTTTATTGATG 1259
Query 1261 ATTTGAAGCACTTAAAAAAGT--GTGTAGCCCTTGGTTTTACGGTTACTTATATGCTAAT 1318
||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct 1260 ATTTGAAGCACTTGAAAAAGTTTGTGTAGCACTTGGTTTTACGGTCACTTATATGCTAAT 1319
Query 1319 CCATGTAACATTCTAGCTTCTATAATAAATAAAATATTTGGGATCGATTCTGCAATTCAA 1378
||||| |||||| || ||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1320 CCATGCAACATTGTACCTTTTATAATAAATAAATTATTTGGGATCGATTCTGCAATTCAA 1379
Query 1379 AGAGAAGATTCTCCAAGAATATTTGACATGTCTCCTGCCTC-ACTTACCTTGTTCAGTTC 1437
||| |||||||||||| || |||||||| ||||||||||| ||||||||||||| ||
Sbjct 1380 AGACAAGATTCTCCAAAAACATTTGACAGGTCTCCTGCCTTTACTTACCTTGTTC--TT- 1436
Query 1438 TTGAAGATTGAGAAGTTCTCTTCAACTACAA-ACTCAGTATCATCTTCAATCAATATTTG 1496
|||||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||
Sbjct 1437 --GAAGATTGAGAATTTCTCTTCAACTACAAGACTCAATATCTTCTTCAATCAATATTTG 1494
Query 1497 TTTAACGAAATAAGTTTCAAGAGAAGACAAGAAACTATGATTTTT 1541
||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1495 TTTAACGAAATAAGTTTCAAGAGAAGACAAGCTACTATGATTTTT 1539
> AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate
dehydrogenase 3 | chr1:11142714-11144633 REVERSE LENGTH=1360
Length=1360
Score = 1818 bits (984), Expect = 0.0
Identities = 1155/1235 (94%), Gaps = 21/1235 (2%)
Strand=Plus/Plus
Query 4 aaaaaaa-aTGGCGGCGTTTTTGCAAACGAACATCCGTCTGAATTCGATCAAGATCGTCC 62
||||||| |||||||||||||||||||| |||||||||||| | ||||| | |
Sbjct 9 AAAAAAAGATGGCGGCGTTTTTGCAAACTAACATCCGTCTG-----G----AGATCATAC 59
Query 63 CGGGAAGATACAGTGCTCTCACCGATCATCAGTTTCGTGCGCCGTATCGAATAAGGTGCG 122
|||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 60 CGGGAAGATACAGTTCTCTCACCGATCATAAGTTTCGTGCGCCGTATCGAATTAGGTGCG 119
Query 123 CTGCGGCTTCACCAGG-GAAAAAACGGTATAATATCGCTCTGCTTCCCGGCGACGGTATT 181
| || |||||||| || ||||||||||||||| ||| |||||||||||||||| |||||
Sbjct 120 CCGCCGCTTCACC-GGTGAAAAAACGGTATAACATCACTCTGCTTCCCGGCGATGGTATC 178
Query 182 GGTCCAGAAGTTATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATCTCTCGAAGGA 241
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 179 GGTCCAGAAGTTATATCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATTTCTCCAAGGA 238
Query 242 CTGGAGTTTGATTTCCAGGAGATGCCTGTCGGAGGAGCAGCCTTGGATTTGGTCGGAGTT 301
|| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 239 CTAGAGTTTGATTTCCAGGAGATGCCTTTCGGCGGAGCAGCTTTGGATTTGGTCGGAGTT 298
Query 302 CCAATGCCTGAGGAAACTTTCACGGCTGCAAAACAATCTGATGCCATTCTTCTTGGAGCT 361
||| |||| |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 299 CCATTGCCGGAGGAAACTTCCACTGCTGCTAAACAGTCTGATGCCATTCTTCTTGGAGCT 358
Query 362 ATTGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGCTCTGTTT 421
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 359 ATCGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAGATGGGTCTGCTT 418
Query 422 TACCTTCGAAGAGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACAGTTTTGCCACAG 481
|| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 419 AACATTCGAAGAGATCTCAATGTCTTTGCTAATTTGAGACCTGCTACAGTTTTACCACAG 478
Query 482 CTAGTTGATGCTTCCACACTGAAGAAAGAAGTAGCAGAAGGTGTTGATATGATGATTGTT 541
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 479 CTAGTTGATGCTTCCACACTGAAGAAAGAAGTAGCACAAGGTGTTGATATGATGATTGTA 538
Query 542 AGGGAGCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGTATCAAGATCAATGAAAAT 601
||||||||||| ||||||||||||||||||||||||||||| || | |||||| ||||||
Sbjct 539 AGGGAGCTCACTGGAGGTATTTACTTTGGAGAGCCAAGAGGCATTACGATCAACGAAAAT 598
Query 602 GGCGAAGAAGTCGGCATTAGTACAGAGATCTATGCTGCTCACGAGGTACTAAACCTTGAC 661
|||||||||||||| ||| |||||||||||| ||||||||||| | | |||||
Sbjct 599 GGCGAAGAAGTCGGTTTTAATACAGAGATCTACGCTGCTCACGA-G------A--TTGAC 649
Query 662 AGAATTGCTCGTGTTGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCGGTC 721
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 650 AGAATTGCTCGTGTTGCATTCGAGACTGCTAGGAAAAGGCGTGGCAAGCTGTGTTCTGTT 709
Query 722 GACAAAGCCAATGTGTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCC 781
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 GACAAAGCCAATGTCTTGGATGCATCAATATTGTGGAGGAAAAGAGTAACAGCTTTAGCC 769
Query 782 TCTGAATATCCTGATGTTGAACTATCACATATGTATGTCGATAATGCTGCAATGCAGCTT 841
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 770 TCTGAATATCCAGATGTTGAACTATCACATATGTATGTCGATAATGCTGCGATGCAGCTT 829
Query 842 ATCCGTGACCCGAAACAGTTTGACACAATCGTCACCAATAACATTTTCGGTGATATATTG 901
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 830 GTCCGTGACCCGAAACAGTTTGACACAATCGTCACCAATAACATTTTTGGTGATATATTG 889
Query 902 TCTGATGAAGCTTCAATGATCACTGGAAGCATTGGAATGCTTCCATCTGCAAGTCTCGGT 961
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct 890 TCTGATGAAGCTTCAATGATCACTGGTAGCATTGGGATGCTTCCATCTGCAAGTCTTGGT 949
Query 962 GAATCGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAA 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 950 GAATCGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGATATAGCTGGACAA 1009
Query 1022 GACAAAGCAAACCCATTGGCCACCATTCTCAGCGCGGCGATGCTTCTGAAGTATGGACTT 1081
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1010 GACAAGGCAAACCCATTGGCCACCATTCTCAGTGCGGCGATGCTTCTCAAGTATGGACTT 1069
Query 1082 GGAGAAGAAAAGGCTGCAAAGAGGATTGAAGACGCGGTCGTGGATGCTCTGAACAAAGGG 1141
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1070 GGAGAAGAAAAGGCTGCAAAGATGATTGAAGACGCGGTCGTGGATGCTCTGAACAAAGGT 1129
Query 1142 TTCAGAACCGGAGACATCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGGT 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1130 TTCAGAACCGGAGACATCTACTCCCCCGGAAATAAACTGGTGGGATGCAAGGAAATGGGT 1189
Query 1202 GAGGAGGTTCTCAAATCAGTGGAATCCAAAGTTCC 1236
||||||||||||||||||||||| |||||||||||
Sbjct 1190 GAGGAGGTTCTCAAATCAGTGGACTCCAAAGTTCC 1224
Score = 119 bits (64), Expect = 9e-26
Identities = 113/134 (84%), Gaps = 14/134 (10%)
Strand=Plus/Plus
Query 1272 TTAA-AAAAGTGTGTAGCCCTTGGTTTTACGGTTACTTATATGCTAATCCATG---T--- 1324
|||| ||||||||||||||||||||||||| ||||||| | ||||||| |||| |
Sbjct 1228 TTAAGAAAAGTGTGTAGCCCTTGGTTTTACTGTTACTTTTTTGCTAATACATGTATTAGA 1287
Query 1325 AAC---ATTC---TAGCTTCTATAATAAATAAAATATTTGGGATCGATTCTGCAATTCAA 1378
||| |||| |||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1288 AACTGTATTCTTGTAGCTTTTATAAT-AATAAAATATTTGGGATCGATTCTGCAATTCAA 1346
Query 1379 AGAGAAGATTCTCC 1392
||| || |||||||
Sbjct 1347 AGACAAAATTCTCC 1360
> AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase
2 | chr1:30287763-30290298 FORWARD LENGTH=1460
Length=1460
Score = 1114 bits (603), Expect = 0.0
Identities = 967/1143 (85%), Gaps = 23/1143 (2%)
Strand=Plus/Plus
Query 114 TAAGGTGCGCTGCGGCTTCACCAGGGAAAAAACGGTATAATATCGCTCTGCTTCCCGGCG 173
|||| || |||| ||||| || || |||||||| || | ||| |||| |||||||| |
Sbjct 162 TAAGATGTGCTGTTGCTTCCCCTGGTAAAAAACGATACACCATCACTCTCCTTCCCGGAG 221
Query 174 ACGGTATTGGTCCAGAAGTTATCTCTGTTGCTAAGAATGTGCTTCAGAAAGCTGGATCTC 233
|||| || ||||| || ||| |||| |||| || |||||||||||| |||||||||||
Sbjct 222 ACGGCATCGGTCCGGAGGTTGTCTCCATTGCCAAAAATGTGCTTCAGCAAGCTGGATCTT 281
Query 234 TCGAAGGACTGGAGTTTGATTTCCAG-GAGATGCCTGTCGGAGGAGCAGCCTTGGATTTG 292
| |||||| |||| ||| | |||| | |||||||| | |||||||| || |||||||||
Sbjct 282 TGGAAGGAGTGGAATTTAACTTCC-GTGAGATGCCCATTGGAGGAGCTGCTTTGGATTTG 340
Query 293 GTCGGAGTTCCAATGCCTGAGGAAACTTTCACGGCTGCAAAACAATCTGATGCCA-TTCT 351
|||||||| || |||| ||||| ||| || | ||||||||| |||| |||| || | ||
Sbjct 341 GTCGGAGTGCCCTTGCCGGAGGAGACTATCTCAGCTGCAAAAGAATCAGATG-CAGTGCT 399
Query 352 TCTTGGAGCTATTGGAGGGTACAAATGGGACAAGAATGAGAAACATCTGAGACCTGAG-A 410
||||||||| |||||||||||||||||||| || ||||| ||||||||||| |||||| |
Sbjct 400 TCTTGGAGCCATTGGAGGGTACAAATGGGATAACAATGAAAAACATCTGAGGCCTGAGAA 459
Query 411 TGGCTCTGTTTTACCTTCGAAG-AGATCTCAAAGTCTTTGCTAATTTGAGACCTGCTACA 469
|| | | || | |||| | || ||||||||||||||| ||| ||||||||||||||
Sbjct 460 GGGGT-TACTTCAGATTCG-TGCAGCTCTCAAAGTCTTTGCAAATCTGAGACCTGCTACA 517
Query 470 GTTTTGCCACAGCTAGTTGATGCTTCCACAC-TGAAGAAAGAAGTAGCAGAAGGTGTTGA 528
|| | |||||| |||| ||||||||||| | | |||| ||| |||||||||||||||||
Sbjct 518 GTCCTCCCACAGTTAGTGGATGCTTCCAC-CTTAAAGAGAGAGGTAGCAGAAGGTGTTGA 576
Query 529 TATGATGATTGTTAGGGAGCTCACAGGAGGTATTTACTTTGGAGAGCCAAGAGGTATCAA 588
| | ||| |||| |||||||| ||||||||||||||||||||||||||||| || || ||
Sbjct 577 TCTAATGGTTGTAAGGGAGCTTACAGGAGGTATTTACTTTGGAGAGCCAAGGGGCATAAA 636
Query 589 GATCAATGAAAATGGCGAAGAAGTCGGCATTAGTACAGAGATCTATGCTGCTCACGAGGT 648
|| ||||||||||||||| ||||| || ||| ||| ||| | |||||||||||||| |
Sbjct 637 GACCAATGAAAATGGCGAGGAAGTTGGGTTTAATACTGAGGTTTATGCTGCTCACGA-G- 694
Query 649 ACTAAACCTTGACAGAATTGCTCGTGTTGCATTCGAGACTGCTAGGAAAAGGCGTGGCAA 708
| |||| ||||||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct 695 -----A--TTGATAGAATTGCTCGTGTTGCCTTCGAGACTGCTCGGAAACGGCGTGGCAA 747
Query 709 GCTGTGTTCGGTCGACAAAGCCAATGTGTTGGATGCATCAATATTGTGGAGGAAAAGAGT 768
||||||||| || |||||||| ||||| ||||| || ||||| || ||||||||| ||||
Sbjct 748 GCTGTGTTCTGTTGACAAAGCTAATGTTTTGGAAGCCTCAATCTTATGGAGGAAACGAGT 807
Query 769 AACAGCTTTAGCCTCTGAATATCCTGATGTTGAACTATCACATATGTATGTCGATAATGC 828
|||||| |||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct 808 AACAGCATTAGCCTCTGAATATCCTGATGTTGAGCTGTCACATATGTATGTTGACAATGC 867
Query 829 TGCAATGCAGCTTATCCGTGACCCGAAACAGTTTGACACAATCGTCACCAATAACATTTT 888
|| ||||||||| | |||||||| |||||||||||||| |||||||| || ||||||||
Sbjct 868 CGCGATGCAGCTTGTTCGTGACCCAAAACAGTTTGACACCATCGTCACAAACAACATTTT 927
Query 889 CGGTGATATATTGTCTGATGAAGCTTCAATGATCACTGGAAGCATTGGAATGCTTCCATC 948
||||||||||| || |||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 928 TGGTGATATATTATCCGATGAAGCTTCAATGATCACAGGAAGCATAGGAATGCTGCCATC 987
Query 949 TGCAAGTCTCGGTGAATCGGGACCTGGACTCTTTGAACCTATACATGGTTCAGCACCAGA 1008
||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 988 TGCTAGTCTCAGTGATTCGGGACCTGGACTCTTTGAACCTATACATGGTTCTGCACCTGA 1047
Query 1009 TATAGCTGGACAAGACAAAGCAAACCCATTGGCCACCATTCTCAGCGCGGCGATGCTTCT 1068
||| |||||||| || || |||||||||||||| |||||||| ||||| || ||||||||
Sbjct 1048 TATTGCTGGACAGGATAAGGCAAACCCATTGGCAACCATTCTAAGCGCTGCAATGCTTCT 1107
Query 1069 GAAGTATGGACTTGGAGAAGAAAAGGCTGCAAAGAGGATTGAAGACGCGGTCGT-GGATG 1127
||| || |||||||||||||||||||| || ||||| ||||||||||| || || || ||
Sbjct 1108 GAAATACGGACTTGGAGAAGAAAAGGCAGCCAAGAGAATTGAAGACGCAGT-GTTGGTTG 1166
Query 1128 CTCTGAACAAAGGGTTCAGAACCGGAGACATCTACTCCCCCGGAA-ATAAACTGGTGGGA 1186
|||||||||| || |||||||| |||||||| |||||| | |||| | |||||||||||
Sbjct 1167 CTCTGAACAACGGATTCAGAACTGGAGACATATACTCCGCGGGAACA-AAACTGGTGGGC 1225
Query 1187 TGCAAGGAAATGGGTGAGGAGGTTCTCAAATCAGTGGAATCCAAAGTTCCAGCTACTGTT 1246
|||||||| ||||| ||||||||||| || |||||||| ||| ||||||||||| |||||
Sbjct 1226 TGCAAGGAGATGGGAGAGGAGGTTCTGAAGTCAGTGGACTCCCAAGTTCCAGCTTCTGTT 1285
Query 1247 TAA 1249
|||
Sbjct 1286 TAA 1288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76053825675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5