BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488255
Length=2564
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14210.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3241 0.0
AT1G31175.1 | Symbols: | unknown protein; Has 20 Blast hits to... 488 1e-136
> AT5G14210.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:4578378-4581374 REVERSE LENGTH=2453
Length=2453
Score = 3241 bits (1755), Expect = 0.0
Identities = 1899/1969 (96%), Gaps = 8/1969 (0%)
Strand=Plus/Plus
Query 1 ATGGAAC-ATTCAAAGGTCTTACCTTTGCTCTTTCTTTCATGGGTTATGATGTTCTTACA 59
||||||| ||| |||||| ||||||||||||||||||||||||| | | |||||||||||
Sbjct 1 ATGGAACAATT-AAAGGTTTTACCTTTGCTCTTTCTTTCATGGG-T-T-ATGTTCTTACA 56
Query 60 AAGCACCCATCAACTTCAAAACTCTCAGACTCAGGTCCTGTATCAGCTCAGGAAGCATCT 119
|||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 57 AAGCACTCATCAACTGCCGAACTCTCAGACTCAGGTCCTGTATCAGCTCAGGAAGCATCT 116
Query 120 GGAATTCCCTAAAGCTCTGGAATCTTGGGGAAATTACTATGGAGACTTATGTCAAATCCC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 GGAATTCCCTAAAGCTCTGGAATCTTGGGGAAATTACTATGGAGACTTATGTCAAATCCC 176
Query 180 TGCAACTGCTCATATGAGCATCACCTGTCAAGGTAATTCCATCACGGAGCTTAAAGTTAT 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 177 TGCAACTGCTCACATGAGCATCACCTGTCAAGGTAATTCCATCACGGAGCTTAAAGTCAT 236
Query 240 GGGGGACAAGCTTTTTAAACCATTTGGTATGTTTGATGGGTCTTCACTTCCAAATCACAC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 GGGGGACAAGCTTTTTAAACCATTTGGTATGTTTGATGGGTCTTCACTTCCAAATCACAC 296
Query 300 TCTCTCTGAAGCATTCTTAATTGATTCTTTTGTTACCACATTGACAAGGCTTACAAGCTT 359
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCTGTCTGAAGCATTCATAATTGATTCTTTTGTTACCACATTGACAAGGCTTACAAGCTT 356
Query 360 GAGGGTTCTTAGCTTAGTGTCTCTAGGTATCTATGGTGAGTTCCCAGGGAAGATCCATCG 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 357 GAGGGTTCTTAGCTTAGTGTCTCTAGGTATCTATGGTGAGTTCCCAGGGAAAATCCATCG 416
Query 420 GTTGAATTCTCTTGAGTACTTGGATTTGAGTTCAAATTATCTGTTCGGTTCTGTCCCTCC 479
|||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||
Sbjct 417 GTTGAATTCTCTTGAGTACTTGGATTTGAGTTCAAATTTTCTGTTTGGCTCTGTCCCTCC 476
Query 480 TGATATTTCCAGATTGGTTATGCTTCAAAGTCTGATGCTTGATGGAAATTACTTCAACGG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TGATATTTCCAGATTGGTTATGCTTCAAAGTCTGATGCTTGATGGAAATTACTTCAACGG 536
Query 540 CAGTGTTCCTGACACGTTGGATTCCTTGACCAATCTTACTGTTCTTAGTTTAAAGAACAA 599
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TAGTGTTCCAGACACGTTGGATTCCTTGACCAATCTTACTGTTCTTAGTTTAAAGAACAA 596
Query 600 TCGGTTCAAAGGTCCATTTCCTTCTTCAATTTGCAGAATTGGAAGACTAACAAATCTTGC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TCGGTTCAAAGGTCCATTTCCTTCTTCAATTTGCAGAATTGGAAGACTAACAAATCTTGC 656
Query 660 TCTATCACACAATGAGATTTCTGGTAAATTGCCTGATCTCAGCAAGTTGAGTCATCTGCA 719
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 657 TCTATCACACAATGAGATTTCTGGTAAATTGCCTGATCTCAGCAAGTTAAGTCATCTGCA 716
Query 720 TATGCTGGATCTGAGAGAAAACCACTTGGATTCTGAACTACCTGTGATGCCTATAAGATT 779
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 717 TATGCTGGATCTGAGAGAAAACCACTTGGATTCTGAACTACCTGTCATGCCTATAAGATT 776
Query 780 GGTTACTGTTCTTCTGAGCAAGAACTCCTTCTCTGGCGAAATTCCCAGACCTTTTGGCGC 839
||||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 777 AGTTACTGTTCTCCTGAGCAAGAACTCCTTCTCAGGCGAAATTCCAAGACGTTTTGGCGG 836
Query 840 TTTGTCTCAGCTTCAGCATCTTGATTTGTCGTTCAATCATTTGACTGGAACTCCATCTCG 899
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 837 TTTGTCTCAGCTTCAGCATCTTGACTTGTCGTTCAATCATCTGACTGGAACTCCATCTCG 896
Query 900 GTTCTTGTTCTCTTTGCCAAACATTAGTTACTTGGACTTGGCATCTAACATGCTCAGTGG 959
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 897 GTTCTTGTTCTCTTTGCCAAACATTAGTTACTTGGATTTGGCATCTAACAAGCTCAGTGG 956
Query 960 GAAGCTACCACTTAATCTGACCTGTGGAGGCAAACTTGGATTTGTGGATTTGTCGAATAA 1019
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 957 GAAGCTACCTCTTAATCTGACCTGTGGAGGCAAACTCGGATTTGTGGATTTGTCGAATAA 1016
Query 1020 CAGATTAATTGGGACTCCTCCCCGTTGCTTGGCAGGAGCTTCCGGCGAGCGAGTTGTTAA 1079
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CAGATTGATTGGGACTCCTCCCCGTTGCTTGGCAGGAGCTTCCGGCGAGCGAGTTGTTAA 1076
Query 1080 ACTCGGTGGAAACTGCTTGTCCATAATTGGCAGTCATGATCAGCATCAAGAGTTCTTATG 1139
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1077 ACTTGGTGGAAACTGCTTGTCCATAATTGGCAGTCATGATCAGCATCAAGAATTCTTATG 1136
Query 1140 TGAAGAGGCTGAAAATGAGGGAAAACAGTTCCAAGGAAGAAAGGTTGGGATTTTGATTGC 1199
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 CGAAGAGGCTGAAACTGAGGGAAAACAGTTCCAAGGAAGAAAGGTTGGGATTTTGATTGC 1196
Query 1200 TGTAATTGGTGGAGGTGTTCTCGTTCTTGTGTTTTTTGTATTAGTAATCCTCCT---GTT 1256
||| |||||||||| |||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 1197 TGTCATTGGTGGAGCTGTTCTTGTTCTTGTGTTTTTTGTATTAGTTATCCTCCTCCTGTT 1256
Query 1257 ATGCACAAACCGCTGCTCTTGCTGTTGTTCAAGAGAAAAGTCAGTGCCGCAAACTCGGCT 1316
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 ATGCACAAACCGCTGCTCTAGCTGTTGTTCAAGAGAAAAGTCAGTGCCGCAAACTCGGCT 1316
Query 1317 TAAGGTTGTGACAGATAATTCACACACCAGTCTCTCAGCTGAAGTTCTTGCTAGTGCAAG 1376
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1317 TAAGGTTGTGACAGATAACTCACACACCAGTCTCTCCTCTGAAGTTCTTGCTAGTGCAAG 1376
Query 1377 GTTAATCTCTCAAACAGCAAAGCTAGGTGCACAAGGTGCGCCCTCATGCCGGTCATTTTC 1436
||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||
Sbjct 1377 GTTAATCTCTCAAACAGCAAAGCTAGGTGCACAGGGTGTGCCCTCATGCCGGTCCTTTTC 1436
Query 1437 TTTTGAAGAGTTAAAGGAAGCCACAGACGATTTTGATTCATCACGTTTCTTAGGTGAAGG 1496
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 TTTTGAAGATTTAAAGGAAGCCACAGACGATTTTGATTCATCACGTTTCTTAGGTGAAGG 1496
Query 1497 CTCCCTTGGAAAGCTATACAGAGGAACACTTGAAAATGGAAGTTCCATAGCTATCAGATG 1556
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1497 CTCCCTTGGAAAGCTATACAGAGGAACACTGGAAAATGGAAGTTCCATAGCTATCAGATG 1556
Query 1557 TCTTGTTTTATCAAGGAAATTCTCCAGCCAGAGTATCAGAGGTCACTTAGATTGGATGTC 1616
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1557 TCTGGTTTTATCAAGGAAATTCTCCAGCCAGAGTATCAGAGGTCACTTAGACTGGATGGC 1616
Query 1617 AAAGCTCAACCATCCTCATCTCCTTAGCTTCTTGGGCCATTGCACTCAAACCAGCGGAGA 1676
||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct 1617 AAAGCTCAACCATCCTCATCTCCTTGGCTTCTTGGGCCATTGTACGCAAACCAGCGGAGA 1676
Query 1677 ACACGTTCCTGTTGCAACCATACTCTACCTTGTATACGAGTATATGCCCAACGGGAGCTA 1736
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 ACACGATCCTGTTGCAACCATACTCTACCTTGTATACGAGTATATGCCCAACGGGAGCTA 1736
Query 1737 TCGCACACATCTATCAGAATCCTTCTCGGAGAAGATCCTGACATGGCCAGATCGGCTAGC 1796
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1737 TCGCACACATCTATCAGAATCTTTCTCGGAGAAGATCCTGACATGGCCAGATCGGCTAGC 1796
Query 1797 AATTCTGATTGAGATAGCAAAGGCAGTTCATTTTCTCCACACCGGTGTAATGCCTGGTTC 1856
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1797 AATTCTGATTGAGATAGCAAAGGCAGTTCATTTTCTTCACACCGGTGTAATGCCTGGTTC 1856
Query 1857 ATTCAACAATCATCTAAAGACGAACAACATTTTGCTTGACGAACACAAAATTGCAAAGCT 1916
|||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 1857 ATTCAACAATCAGCTTAAGACTAACAATATTTTGCTTGACGAACACAAGATTGCAAAGCT 1916
Query 1917 CAGTGACTATGGAGTCTCTGCCATCATTGAAGAGAACGAAAAGCTCGAG 1965
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1917 CAGTGACTATGGAGTCTCTGCCATCATTGAAGAGAACGAAAAGCTTGAG 1965
Score = 782 bits (423), Expect = 0.0
Identities = 450/463 (97%), Gaps = 2/463 (0%)
Strand=Plus/Plus
Query 2103 GAAAATGGCTAAAAGAGAGGACGATGTGTACAACTTCGGATTCATACTTCTGGAATCTCT 2162
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1992 GAAAAAGGCTAAAAGAGAGGACGATGTGTACAACTTCGGATTCATACTTCTGGAATCTCT 2051
Query 2163 GATAGGACCAGTGCCCACTACAAAAGGAGAGGCTTATCTTCTCAACGAAATGACATCATT 2222
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2052 GATAGGACCAGTGCCCACTACAAAAGGAGAGGCTTTTCTTCTCAACGAAATGACATCATT 2111
Query 2223 TGGGAGCCAAGACGGTCGGCAGAAAATAGTAAGTCCAACGGTCCTAACAACAAGCTCGCA 2282
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2112 TGGGAGCCAAGACGGTCGGCAGAAAATAGTAAGTCCAACAGTCCTAACAACAAGCTCGCA 2171
Query 2283 GGAGTCTTTATCGATTGCGATCTCAATCGCCAATAAATGTGTTTTGCTTGAACCTTCCGC 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2172 GGAGTCTTTATCGATTGCGATCTCAATCGCCAATAAATGTGTTTTGCTTGAACCTTCCGC 2231
Query 2343 AAGACCTTCCTTTGAAGATGTTCTCTGGAACTTACAATACGCAGCTCAAATGCAGTCTGC 2402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2232 AAGACCTTCCTTTGAAGATGTTCTCTGGAACTTACAATACGCAGCTCAAATGCAGTCTGC 2291
Query 2403 CGCAGATGCTGAACGCAAATCTGATACGTCGTCGTGAATCCCAAGGCTAACCTAATGATT 2462
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2292 CGCAGACGCTGAACGCAAATCTGATACGTCGTCGTGAATCCAAAGGCTAACCTAATGATT 2351
Query 2463 GATAgttttt-cggttttttaaatgtaaagttttataagtttggtttttCAGTATAAAAA 2521
|||||||||| ||||||| ||||||||||| | ||||||||||||||| |||||||||||
Sbjct 2352 GATAGTTTTTTCGGTTTTCTAAATGTAAAGCTCTATAAGTTTGGTTTT-CAGTATAAAAA 2410
Query 2522 TGTAAGACTCTTGCGACTAAAAATCATAGTTTCTTGTCTTCTC 2564
||||||||||||| |||||||||||||||| |||||||||||
Sbjct 2411 TGTAAGACTCTTGAGACTAAAAATCATAGTAGCTTGTCTTCTC 2453
Score = 54.7 bits (29), Expect = 4e-06
Identities = 32/33 (97%), Gaps = 1/33 (3%)
Strand=Plus/Plus
Query 1994 TTGCAGACAAAGTCAGAAACCCACAAGTCAAAG 2026
||| |||||||||||||||||||||||||||||
Sbjct 1961 TTG-AGACAAAGTCAGAAACCCACAAGTCAAAG 1992
> AT1G31175.1 | Symbols: | unknown protein; Has 20 Blast hits
to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr1:11140549-11142630 FORWARD
LENGTH=1993
Length=1993
Score = 488 bits (264), Expect = 1e-136
Identities = 325/354 (92%), Gaps = 5/354 (1%)
Strand=Plus/Plus
Query 2214 GACATCATTTGGGAGCCAAGACGGTCGGCAGAAAATAGTAAGTCCAACGGTCCTAACAAC 2273
||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||
Sbjct 1606 GACGTCATTTGGGAGCCAAGACTGTCGACAGAAAATAGGAAGTCCAACGGTCCTAACAAC 1665
Query 2274 AAGCTCGCAGGAGTCTTTATCGA-TTGCGATCTCAATCGCCAATAAATGTGTTTTGCTTG 2332
||||||||||||||||||| | | |||| |||||||||||||||||||||||||||||||
Sbjct 1666 AAGCTCGCAGGAGTCTTTACCCAATTGCCATCTCAATCGCCAATAAATGTGTTTTGCTTG 1725
Query 2333 AACCTTCCGCAAGACCTTCCTTTGAAGATGTTCTCTGGAACTTACAATACGCAGCTCAAA 2392
||||||| ||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct 1726 AACCTTCTGCAAGAC-TTCCTTTAAAGATGTTCTCTGGAACTTACCATATGCAGCTCAAA 1784
Query 2393 TGCAGTCTGCCGCAGATGCTGAACGCAAATCTGATACGTCGTCGTGAATCCCAAGGCTAA 2452
|||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1785 TGCAGTCTGCCGCAGACGCTGAACGCAAATCTGATAAGTCGTCGTGAATCCAAAGGCTAA 1844
Query 2453 CCTAATGATTGATAgtt-ttt-cggttttttaaatgtaaagttttataagtttggttttt 2510
||| ||||||||||||| ||| ||| ||| ||||||| | ||||||||||||||||||||
Sbjct 1845 CCTGATGATTGATAGTTGTTTTCGGATTTATAAATGTTATGTTTTATAAGTTTGGTTTTT 1904
Query 2511 CAGTATAAAAATGTAAGACTCTTGCGACTAAAAATCATAGTTTCTTGTCT-TCT 2563
||||| |||||||||| ||||| ||| ||||||| ||||||||||||||| |||
Sbjct 1905 CAGTAGAAAAATGTAATACTCTAGCGGCTAAAAAACATAGTTTCTTGTCTCTCT 1958
Score = 407 bits (220), Expect = 3e-112
Identities = 344/398 (86%), Gaps = 31/398 (8%)
Strand=Plus/Plus
Query 1095 CTTGTCCATAATTGGCAGTCATGATCAGCATCAAGAGTTC-TTATGTGAAGAGGCTGAAA 1153
||| ||||| |||||||||||||||||||||||||| ||| | || |||||||||||||
Sbjct 1033 CTTTTCCATTATTGGCAGTCATGATCAGCATCAAGAATTCGTAAT-CGAAGAGGCTGAAA 1091
Query 1154 ATGAGGGAAAACAGTTCCAAGGAAGAAAGGTTGGGATTTTGATTGCTGTAATTGGTGGAG 1213
|||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct 1092 CTGAGGGAAAACAGTTCCAAGGAAGAAAGATTGGGATTTTGGTTGCTGTCCTTGGTGGA- 1150
Query 1214 GTGTTCTCGTTCTTGTGTTTTTTGTATTAGTAATCCTCCTGTTATGCACAAACCGCTGCT 1273
| | | | || || || ||| | | || ||| |||||||||||
Sbjct 1151 --G--AT-G-TATT-TG-TTCTTG---T-G---------TG-TAT----AAACCGCTGCT 1184
Query 1274 CTTGCTGTTGTTCAAGAGAAAAGTCAGTGCCGCAAACTCGGCTTAAGGTTGTGAC--AGA 1331
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct 1185 CTTGCTGTTGTTCAAGAGAAAGGTCAGTGCCTCAAACTCGGCTTAAGGTTGTGACAGAGA 1244
Query 1332 TAATTCACACACCAGTCTCTCAGCTGAAGTTCTTGCTAGTGCAAGGTTAATCTCTCAAAC 1391
||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
Sbjct 1245 TAACTCACACACCAGTCTCTCCTCCGAAGTTCTTGCTAGTGCAAGGTTAATCTCTCAAGC 1304
Query 1392 AGCAAAGCTAGGTGCACAAGGTGCGCCCTCATGCCGGTCATTTTCTTTTGAAGAGTTAAA 1451
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1305 AGCAAAGCTAGGTGCACAAGGTGTGCCCTCATTCCGGTCATTTTCTTTTGAAGAGTTAAA 1364
Query 1452 GGAAGCCACAGACGATTTTGATTCATCACGTTTCTTAG 1489
|||||||||||||||||| |||||||||||||||||||
Sbjct 1365 GGAAGCCACAGACGATTTCGATTCATCACGTTTCTTAG 1402
Score = 272 bits (147), Expect = 1e-71
Identities = 203/228 (89%), Gaps = 12/228 (5%)
Strand=Plus/Plus
Query 824 CCAGACCTTTTGG-CGCTTTGTCTCAGCTTCAGCATCTTGATTTGTCGTTCAATCATTTG 882
||||| |||||| | |||||||||||||||||||||||| ||| ||||||||||| ||
Sbjct 818 CCAGAAGTTTTGGTTG-TTTGTCTCAGCTTCAGCATCTTGACTTGACGTTCAATCATCTG 876
Query 883 ACTGGAACTCCATCTCGGTTCTTGTTCTCTTTGCCAAACATTAGTTACTTGGACTTGGCA 942
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 877 ACTGGAACTTCATCTCGGTTCTTGTTCTCTTTGCCAAACATTAGTTACTTAGACTTTGCA 936
Query 943 TCTAACATGCTCAGTGGGAAGCTACCA-CTTAATCTGACCTGTGGAGGCAAACTTGGATT 1001
||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 937 TCTAACAAGCTCAGTGGGAAGCTA-CAGCATAATCTGACCTGTGGAGGCAAACTTGGATT 995
Query 1002 TGTGGATTTGTCGAATAACAGATTAATTGGGACTCCTCCCCGTTGCTT 1049
||| |||||||||||||||||||||| |||||||||| |||
Sbjct 996 TGT--------CGAATAACAGATTAATTGGGACCCCTCCCCGTTTCTT 1035
Score = 195 bits (105), Expect = 3e-48
Identities = 126/136 (93%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 2087 CTTTGGGATTATGCAGGAAAATGGCTAAAAGAGAGGACGATGTGTACAACTTCGGATTCA 2146
|||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct 1403 CTTTGGAATTATGCAGGAAAATGGCTAAAACAGAGGGCGATGTGTACAACTTTGGATTCA 1462
Query 2147 TACTTCTGGAATCTCTGATAGGACCAGTGCCCACTACAAAA-GGAGAGGCTTATCTTCTC 2205
|||||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||
Sbjct 1463 TACTTCTGGAATCTCTGATAGGACCAGTACCTACTACAAAAAGGAGAGGCCTATCTTCTC 1522
Query 2206 AACGAAATGACATCAT 2221
||||||||| |||||
Sbjct 1523 AACGAAATGGTATCAT 1538
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127273534391
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5