BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488268
Length=1735
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14310.1 | Symbols: AtCXE16, CXE16 | carboxyesterase 16 | ch... 2575 0.0
AT3G27320.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 592 5e-168
> AT5G14310.1 | Symbols: AtCXE16, CXE16 | carboxyesterase 16 |
chr5:4615318-4617615 FORWARD LENGTH=1808
Length=1808
Score = 2575 bits (1394), Expect = 0.0
Identities = 1513/1569 (96%), Gaps = 13/1569 (1%)
Strand=Plus/Plus
Query 171 AAAAATCTGGTCTTTTCTGGAGGGAAATGCCAGGGGTAGCTGTGAAGCTCTATAGCGTCT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 AAAAATCTGGTCTTTTCTGGAGGGAAATGCCAGGGGTAGCTGTGAAGCTCTATAGCGTCT 308
Query 231 TCTTTAAGTTACTTTTGAAACATCGTCTTCAGAATCTGATTTCAATTTCAGCTGCTGATG 290
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 TCTTTAAGTTACTATTGAAACATCGTCTTCAGAATCTGATTTCAATTTCAGCTGCTGATG 368
Query 291 GGTTATCTGATTCGTTCGGTGTTTCGACCCGATCCGATGAATCCGTCGCCGCCGCGAATC 350
| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 GCTTATCTGATTCCTTTGGTGTTTCGACCCGATCCGATGAATCCGTCGCCGCCGCGAATC 428
Query 351 CGTCTTTCACCGACGGTGTTGCGACCAAAGATATTCACATTGATCCAATGACGTCACTCA 410
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 429 CGTCTTTCACCGACGGTGTTGCCACCAAAGATATACACATTGATCCAATGACGTCACTCA 488
Query 411 CCGTAAGGATCTTTCTTCCTGAATCTGCTCTTTCTCCACCTGAACCAGATTCGTTACGCC 470
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 489 CCGTAAGGATCTTTCTTCCCGAATCTGCTCTTTCTCCA---GAACCAGATTCGTTACGCC 545
Query 471 ACAAGGATCATTTTCACCACCAACCCAGATCTGATCGGAGACATAGCTATGGCCCTAATC 530
|||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 546 ACAAGGATAATTATAACCACCAACCCAGATCTGATCGGAGACATAGCTATGGCCCTAATC 605
Query 531 ATAACTCTCCGGCACTGGCGGAGAGGAATGAATCTCGAAGGAACAGCTATGGATGCAACA 590
||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 606 ATAACTCTCCGGCACCGGCGGAGAGGAACGAATCTCGAAGGAACAGCTATGGTTGCAACA 665
Query 591 ACGAGAATCTAGTACCGTATGGAGGATATGCGCCATCTGCGAAGAGGAATTCTCGGAAAC 650
|||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 666 ACGAGAATCTAGAACCTTATGGTGGATATGCGCCATCTGCGAAGAGGAATTCTCGGAAAC 725
Query 651 TACCAGTGATGTTGCAGTTTCACGGTGGTGGTTGGGTTAGTGGAAGTTCTGATTCGGCGG 710
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct 726 TACCAGTGATGTTGCAGTTTCATGGTGGAGGTTGGGTTAGTGGAAGTTCTGATTCGGCTG 785
Query 711 CTAATGACTTCTTTTGCCGGAGAATTGCTAAAGTATGTGATGTGATTGTATTGGCCGTTG 770
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 786 CTAATGACTTCTTTTGCCGGAGAATTGCTAAAGTCTGTGATGTCATTGTATTGGCCGTTG 845
Query 771 GTTATAGGCTTGCGCCTGAGAATCGGTATCCTGCGGCGTTTGAGGATGGAGTCAAAGTGC 830
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 846 GTTATAGGCTTGCGCCTGAGAATAGGTACCCTGCGGCGTTTGAGGATGGAGTCAAAGTGC 905
Query 831 TGAATTGGCTTGGGAAACAGGCTAATCTAGCTGAATGTTGTAAGTCTTTGGGTAATCGAC 890
| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 906 TTCATTGGCTTGGGAAACAGGCTAATCTAGCTGATTGTTGTAAGTCTTTGGGTAATCGAC 965
Query 891 GCGTCAATGGCGTTGAGGTTAAGAAGTTGAATGTTCAAGGACAGATTGTGGATGCTTTTG 950
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 GTGTCAATGGCGTTGAGGTTAAGAAGTTGAATGTTCAAGGACAGATTGTGGATGCTTTTG 1025
Query 951 GAGCTTCCATGGTTGAGCCTTGGTTGGCAGCTCACGCCGATCCTTCCAGATGTGTTCTTC 1010
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1026 GAGCTTCCATGGTTGAGCCTTGGTTGGCTGCTCACGCCGATCCTTCCAGATGTGTTCTTC 1085
Query 1011 TCGGGGTGAGCTGTGGTGGGAACATAGCAGACTATGTAGCTCGGAAAGCAGTGGAAGCTG 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 TCGGGGTGAGCTGTGGTGGGAACATAGCAGACTATGTAGCTCGGAAAGCAGTGGAAGCTG 1145
Query 1071 GGAAACTTCTAGAACCGGTGAAAGTTGTTGCACAGGTTCTAATGTACCCGTTTTTCATTG 1130
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1146 GGAAACTTCTAGAACCGGTGAAAGTTGTTGCACAGGTTCTAATGTACCCCTTTTTCATTG 1205
Query 1131 GAAACAACCCAACACAGTCCGAAATAAAGCTGGCAAACTCTTACTTGTACGATAAGCCTG 1190
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1206 GAAACAACCCAACACAGTCCGAAATAAAGCTGGCAAACTCTTACTTCTACGATAAGCCTG 1265
Query 1191 TCTCTGTTCTCGCCTGGAAACTCTTCTTACCAGAGAAAGAGTTCGACTTTGACCACCCGG 1250
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 TCTCTGTTCTAGCCTGGAAACTCTTCTTACCAGAGAAAGAGTTCGACTTTGACCACCCGG 1325
Query 1251 CAGCAAACCCACTTGCCCATAACCGCAGTGGACCACCTTTGAAGCTAATGCCTCCAACAC 1310
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1326 CAGCAAACCCACTTGCCCATAACCGCAGTGGACCACCTCTGAAGCTAATGCCTCCAACAC 1385
Query 1311 TTACAGTAGTAGCTGAGCATGACTGGATGAGAGACCGAGCCATTGCTTATTCAGAAGAGC 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386 TTACAGTAGTAGCTGAGCATGACTGGATGAGAGACCGAGCCATTGCTTATTCAGAAGAGC 1445
Query 1371 TTAGAAAGGTAAACGTAGATTCTCCAGTTTTAGAATACAAAGACGCAGTTCATGAGTTTG 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 TTAGAAAGGTAAACGTAGATTCTCCAGTTTTAGAATACAAAGACGCAGTTCATGAGTTTG 1505
Query 1431 CAACACTTGATATGCTTCTCAAGACTCCTCAGGCACAGGCCTGCGCCGAAGATATTGCCA 1490
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 CTACACTTGATATGCTTCTCAAGACTCCTCAGGCACAGGCCTGCGCCGAAGATATTGCCA 1565
Query 1491 TTTGGGTCAAGAAATACATTTCAATCCGCGGCCATGAATTCTCTTACTGAAAATTTTTAC 1550
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1566 TTTGGGTCAAGAAATACATTTCACTCCGCGGCCATGAGTTCTCTTACTGAAAATTTTTAC 1625
Query 1551 CCTGTTATTATTATTCATTTTCTTCCTATTTTT-GTGTGATAGCAAGATTTCCTGGGTAG 1609
|||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 1626 CCTGTTATTATT---CATTTTCTTCCTTTTTTTTGTGTGATAGCAAGATTTTCTGGGTAG 1682
Query 1610 GATTTAGAGACGATCCAAGATGGAGTCTTTTTGCAAA-GTTATCAAATTT-ATTTTTTGG 1667
|||| |||||| ||||||||| ||||||||| ||||| | ||| |||||| |||||||||
Sbjct 1683 GATT-AGAGACAATCCAAGATCGAGTCTTTTGGCAAAAGCTATAAAATTTTATTTTTTGG 1741
Query 1668 GGTTAATTATGTATTCATATGTACGTATTCTGAATAAACCATTTT-GGTTCGACCAAATT 1726
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1742 --TTACTTATGTATTCATATGTACGTATTCTGAATAAACCATTTTTGGTTCGACCAAATT 1799
Query 1727 TTCAAGTTT 1735
|||||||||
Sbjct 1800 TTCAAGTTT 1808
> AT3G27320.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:10090202-10092791 FORWARD LENGTH=1888
Length=1888
Score = 592 bits (320), Expect = 5e-168
Identities = 717/907 (79%), Gaps = 33/907 (4%)
Strand=Plus/Plus
Query 647 AAACTACCAGTGATGTTGCAGTTTCACGGTGGTGGTTGGGTTAGTGGAAGTTCTGATTCG 706
||||| || |||||||||||||| || |||||||| ||||| ||||||||| ||| ||
Sbjct 598 AAACTTCCTGTGATGTTGCAGTTCCATGGTGGTGGATGGGTAAGTGGAAGTAATGACTCA 657
Query 707 GCGGCTAATGACTTCTTTTGCCGGAGAATTGCTAAAGTA-TGTGATGTGATTGTATTGGC 765
| ||||||||| |||||||| | || || || ||| | ||||| | ||||| |||||
Sbjct 658 GTGGCTAATGATTTCTTTTGTAGAAGGATGGC-GAAGCACTGTGACATCATTGTTTTGGC 716
Query 766 CGTTGGTTATAGGCTTGCGCCTGAGAATCGGTATCCTGCGGCGTTTGAGGATGGAG-TCA 824
|| || || ||||||||||||||||||||||||||||| |||| ||||||||| | |||
Sbjct 717 AGTCGGGTACAGGCTTGCGCCTGAGAATCGGTATCCTGCTGCGTGTGAGGATGG-GTTCA 775
Query 825 AAGTGCTGAATTGGCTTGGGAAACAGGCTAATCTAGCTGAATGTTGTAAGTCTTTGGGTA 884
| ||| |||| ||||| ||||| ||||| ||| | ||||||||| |||||| |||| |
Sbjct 776 AGGTGTTGAAATGGCTGGGGAAGCAGGCGAATTTGGCTGAATGTAATAAGTCGATGGGAA 835
Query 885 A-TCGACG-CGTCAATGGCGTTGAGGTTAAGAAGT-TGAATGTTCAAGGA-CAGATTGTG 940
| || || || | ||| | |||||| ||||| | ||| ||| || | || || ||
Sbjct 836 ATTC-TCGACGAC-CTGGAGGTGAGGTGAAGAAATCAGAA-GTT-AATAAGCATATAGTT 891
Query 941 GATGCTTTTGGAGCTTCCATGGTTGAGCCTTGGTTGGCAGCTCACGCCGATCCTTCCAGA 1000
||||||||||| |||||| |||| ||||||||| ||||| ||| || ||||| || |||
Sbjct 892 GATGCTTTTGGTGCTTCCTTGGTGGAGCCTTGGCTGGCAAATCATGCTGATCCCTCGAGA 951
Query 1001 TGTGTTCTTCTCGGGGTGAGCTGTGGTGGGAACATAGCAGACTATGTAGCTCGGAAAG-C 1059
||||| |||||||| ||||||||||||| || ||||||||||||||||| || |||| |
Sbjct 952 TGTGTGCTTCTCGGTGTGAGCTGTGGTGCCAATATAGCAGACTATGTAGCCCGCAAAGCC 1011
Query 1060 AGTGGAAGCTGG-GAAACTTCTAGAACCGGTGAAAGTTGTTGCACAGGTTCTAATGTACC 1118
| | |||| ||| ||| |||||| || || || ||||| || || || ||||||||||
Sbjct 1012 A-TTGAAGTTGGTCAAA-ATCTAGATCCTGTCAAGGTTGTGGCTCAAGTCCTAATGTACC 1069
Query 1119 CGTTTTTCATTGGAAAC-AACCCAACACAGTCCGAAAT-AAAGCTGGCAAACTCTTACTT 1176
|||| ||||| || | | |||| |||||||| || || ||| | |||||| || |||||
Sbjct 1070 CGTTCTTCATCGGTAGCGTACCC-ACACAGTCTGAGATCAAA-CAGGCAAATTCCTACTT 1127
Query 1177 GTACGATAAGCCTGTCT-CTGTTCTCGCCTGGAAACTCTTCTTACCAG-AGAAAGAGTTC 1234
||||| || ||| | | | ||||||| ||||| || |||||||||| || |||| |||
Sbjct 1128 CTACGACAAACCTATGTGC-ATTCTCGCATGGAAGCTTTTCTTACCAGAAG-AAGAATTC 1185
Query 1235 GA-CTTTGACCACCCGGCAGCAAACCCACTTG-CCCATAACCGCAGTGGACCACCTTTGA 1292
| | | ||||||| |||||| ||||| || | ||| ||| ||| ||||| | |
Sbjct 1186 -AGCCTAGACCACCAGGCAGCGAACCCGCTCGTTCCA-GGCCGAAGT---CCACCGCTCA 1240
Query 1293 AGCTAATGCCTCCAACACTTA-CAGTAGTAGCTGAGCATGACTGGATGAGAGACCGAGCC 1351
|| | ||||| || ||||| | || | || || |||||||||||||||||||||||||||
Sbjct 1241 AGTTCATGCCACCTACACTAACCA-TTGTCGCAGAGCATGACTGGATGAGAGACCGAGCC 1299
Query 1352 ATTGCTTATTCAGAAGAGCTTAGAAAGGTAAACGTAGATTCTCCAGTTTTAGAATACAAA 1411
|||||||| ||||||||||| |||||||| ||||||||| |||| || |||| ||||||
Sbjct 1300 ATTGCTTACTCAGAAGAGCTAAGAAAGGTCAACGTAGATGCTCCCGTGCTAGAGTACAAA 1359
Query 1412 GACGCAGTTCATGAGTTTGCAACACTTGATATGCTTCTCAAGACTCCTCAGGCACAGGCC 1471
||||| ||||| ||||||||||| || || |||||||| | |||||| || || |||||
Sbjct 1360 GACGCGGTTCACGAGTTTGCAACCCTCGACATGCTTCTTAGGACTCCGCAAGCTCAGGCT 1419
Query 1472 TGCGCCGAAGATATTGCCATTTGGGTCAAGAAATACATTTCAATCCGCGGCCATGAATTC 1531
|| || ||||||||||| || |||| |||||||||||| || | || ||||| || |||
Sbjct 1420 TGTGCAGAAGATATTGCAATCTGGGCCAAGAAATACATCTCTCTTCGTGGCCACGAGTTC 1479
Query 1532 TCTTACT 1538
|| ||||
Sbjct 1480 TCATACT 1486
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85792731405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5