BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488312
Length=1438
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14700.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1941 0.0
> AT5G14700.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:4740252-4743446 REVERSE LENGTH=1476
Length=1476
Score = 1941 bits (1051), Expect = 0.0
Identities = 1343/1476 (91%), Gaps = 51/1476 (3%)
Strand=Plus/Plus
Query 1 GTGTATCTCTCTCTACCGACTCTGAACCTATAGAGCCAACGAAA-CA-A-GA-A--G-AT 53
|||||||||| |||||| ||||||||||||||||||||||||| || | || | | |
Sbjct 1 GTGTATCTCTTTCTACCTTCTCTGAACCTATAGAGCCAACGAAACCAGAGGACAGTGAAC 60
Query 54 TCAG-A--GGA-CAGT-GAAC-AAAGAAGTTCATTTGCTGATTCTTTACTTCGAC---TA 104
|| | | | | | || | || |||| |||| |||||||||||| |||| ||
Sbjct 61 AAAGAATTGTATAATTCGATCTCAACTCGTTCCTTTGTTGATTCTTTACTCCGACTATTA 120
Query 105 TGAGGATTGTACGTGCGACGGATACGTTCTCGGCGGAGCTTAAGGAGTTCATGTGCGCCG 164
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 121 TGAGGATTGTACGTGCGACGGAGACGTTCTCGGCGGAGCTTAAAGAGTTCATGTGCGCCG 180
Query 165 CTGTGCAAAGGAGGAGAGACGACGACGGATTTAGAGGCTCTCGTGGTGGTGGTAAATCAA 224
||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |
Sbjct 181 CTGTGCAAAGGAGGAAAGACGACGACGGATTCAGAGGCTCTCGTGGCGGTGGTAAATCTA 240
Query 225 GAAATGCCATGGATCTGGATTCTGACTCCGGAAACAGATTGGTTTGTGTAACTGGTGGTG 284
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 241 GAAATGCCATGGATCTTGATTCTGACGCCGGAAACAGATTGGTTTGTGTTACTGGTGGTG 300
Query 285 TTTCTTATCTTGGTCGTGCCATCGTTAAACGTCTTCTTGTCCATGGATACTCCGTTAGAA 344
||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 301 TTTCTTACCTTGGTCGTGCCATTGTTAAACGTCTTCTTGTTCATGGATACTCCGTTAGAA 360
Query 345 TCGTCGTTGATTGTCCAGAGGACAAAGAGAAAGTGAGTGAGATGGAAGCCGACGCTGAAA 404
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 361 TCGTCGTTGATTGTCCAGAGGACAAAGAGAAAGTGAGTGAGATGGAAGCTGACGCTGAAA 420
Query 405 CGGCGTCGTTTAGCAACAGGATTACTTCAGTGGTTTCTCGATTAACAGAGATCGAGAGTT 464
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
Sbjct 421 CGGCGTCGTTTAGCAACATGATTACTTCAGTGGTTTCTCGATTAACAGAGATCGATAGCT 480
Query 465 TGATTAAAGCGTTTGATGGTTGTGCTGGCGTTTTCCACACTTCTGCGTTTGTAGATCCTG 524
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 481 TAATTAAAGCGTTTGATGGTTGTGCTGGCGTTTTCCACACTTCTGCGTTTGTTGATCCTG 540
Query 525 CTGGAATCTCTGGATATTCGAAATCAATGGCGGAATTAGAAGCAAAAGTGAGCGAGAATG 584
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 541 CTGGAGTCTCTGGATATTCGAAATCAATGGCGGAGTTAGAAGCAAAAGTGAGCGAGAGTG 600
Query 585 TAATCGAAGCGTGTACAAGAACAGCCTCAGTGAGAAAATGTGTCTTCACATCATCTCTCT 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TAATCGAAGCGTGTACAAGAACAGCCTCAGTGAGAAAATGTGTCTTCACATCATCTCTCT 660
Query 645 TAGCCTGCACTTGGCAAAACAATACCTACAACAATCTTGATTACTCTGTTATCAACGAAG 704
|||||||| |||||||||| ||| ||| || | |||||| ||||||||||||| ||||
Sbjct 661 TAGCCTGCGCTTGGCAAAAAAATCCCTGTAATAGTCTTGACCACTCTGTTATCAATGAAG 720
Query 705 AAAGCTGGAGCGACGAACAACTCTGCATCGATAATAAGCTTTGGTATGCACTTGGAAAAC 764
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 AAAGCTGGAGCGATGAACAACTCTGCATCGATAATAAGCTTTGGTATGCACTTGGAAAAC 780
Query 765 TCAAAGCCGAGAAAGCTGCGTGGAGAATCGCAGATTCGAAAGGATTAAAGCTTGCAACTA 824
| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct 781 TAAAAGCCGAGAAAGCTGCGTGGAGAATAGCTGATTCAAAAGGATTAAAGCTTGCAACTA 840
Query 825 TATGTCCTGCTCTTATAACTGGTCCTGACTTCTTCAACCGTAACTCCACTTCAACCTTAG 884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 841 TATGTCCTGCTCTTATAACTGGTCCTGACTTCTTCAACCGTAACTCCACTTCAACCTTGG 900
Query 885 CTTATCTCAAAGGAGCAAAAGAGATGTATAGTAACGGATTATTAGCGACAATGGATGTGA 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CTTATCTCAAAGGAGCAAAAGAGATGTATAGTAACGGATTATTAGCGACAATGGATGTGA 960
Query 945 ACAGGTTGGCTAAAGCTCACGTGTGTTTGTGGGAAGGTTTGGGTAATAAAACTGCGTTTG 1004
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 961 ACAGGTTGGCTAAAGCTCACGTATGTTTGTGGGAAGGTTTGGGTAATAAAACTGCGTTTG 1020
Query 1005 GTAGATACATTAGTTTCGACACCATTCTCTCTAGAGATGGTGCTGAAAAACTTGCTAAAG 1064
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1021 GTAGATACATTTGTTTCGACACCATTCTCTCTAGAGATGGTGCTGAAAAGCTTGCAAAAG 1080
Query 1065 ATATCGGTGTTCAAATCGAAAAGATTTGCGGTAACAGCAACGATTCAGACGCAAACGCAG 1124
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1081 ATATCGATGTTCAAATCGAAAAGATTTGCGGTAACAGCAACGATTCAGATGCAAACACAG 1140
Query 1125 AAACAGATGCTTCTTTACAAATATCAGATAAAAAGCTTTTAGATCTTATGTCAAGAACTC 1184
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1141 AAACAGAAGCTTCTTTACAAATATCAGATAAAAAGCTATTAGATCTTATGTCAAGAACTC 1200
Query 1185 TACGAAGTTGCTACCATGAAAGTTAGCTAG--AC-ACGAC------------GAGCAATT 1229
||||||||||||||||||| |||||||||| || ||||| ||||| ||
Sbjct 1201 TACGAAGTTGCTACCATGAGAGTTAGCTAGGCACGACGACAAAAATTAAACAGAGCAGTT 1260
Query 1230 CTAAGCTGTTGACGTGGTGttttgctcttattcttttcttctttttataattatgctttc 1289
||||||| ||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct 1261 CTAAGCTATTGACGTAACGTTTTGCTCTTATTCTTTTCTTCTTTT-A-AATTATGCTTTA 1318
Query 1290 tttttgtttaattttcttatAATGATAA-TCATTCATCAATATCAAATaaaaaaaTGATA 1348
||| | || ||| | ||||||||| ||||| || || || ||| ||||| ||| |
Sbjct 1319 TTTAT-TTG--TTTAGTG-TAATGATAAATCATT-ATGAA-AT-AAA-AAAAA--TGAGA 1368
Query 1349 ATCATTGTTATTTGTA------CGAATGTGGTTTGTGTGGAGGGAGGTTGTTGTAAAGGG 1402
|||||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 1369 ATCATTGTTATTTGTAATTGTACGAATGTGGTTTGCGTGGAGGGTGGTTGTTGTAAAGGG 1428
Query 1403 CCGGTAGAGTTGGTATTCGTTGAAAATTTTTAAATT 1438
| |||||||||||| ||||| |||||||| ||||||
Sbjct 1429 C-GGTAGAGTTGGTGTTCGTGGAAAATTTATAAATT 1463
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70883169540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5