BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488348
Length=3444
Score E
Sequences producing significant alignments: (Bits) Value
AT5G15070.2 | Symbols: | Phosphoglycerate mutase-like family p... 4944 0.0
AT3G01310.1 | Symbols: | Phosphoglycerate mutase-like family p... 3491 0.0
> AT5G15070.2 | Symbols: | Phosphoglycerate mutase-like family
protein | chr5:4876588-4885702 FORWARD LENGTH=3384
Length=3384
Score = 4944 bits (2677), Expect = 0.0
Identities = 2848/2931 (97%), Gaps = 9/2931 (0%)
Strand=Plus/Plus
Query 68 CTATCGCTAGCTATTGCTCTCTCTGCTTGTGATCATCGTTTTCCCCGACGGAGAACGAGA 127
||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1 CTATCTCTAGCTATTGCTCTCTCTGCTTGTGATCATCATTTTCCCCAACGGAGAACGAGA 60
Query 128 GAACGTCGTT-GTGTAA--AATCGAGGAACGA--AACGGA--AAGAGGAGAGAGCGAGAA 180
|||||||||| | | || || | |||| || || | ||||||||||||| ||
Sbjct 61 GAACGTCGTTCGAGGAACGAAAC--GGAAAGAGGTTCGTATCGGGAGGAGAGAGCGAAAA 118
Query 181 TGGGGTTGGAAGAAGGAGCAGGTGTTGATAAGAAGATAAAGATTGGAGTCTGCGTCATGG 240
||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 119 TGGGGGTGGAAGAAGGAGCTGGTGTTGATAAGAAGATAACGATTGGAGTCTGCGTCATGG 178
Query 241 AAAAGAAGGTTTTCTCAGCTCCCATGGGACAAATTATGGACAGGATACACGCCTTTGGCG 300
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 179 AAAAGAAGGTTTTTTCAGCTCCCATGGGACAAATTATGGACAGGATACATGCGTTTGGCG 238
Query 301 AATTTGAGATTATACATTTTGGGGATAAGGTCATACTTGAAGACCCAGTAGAAAGTTGGC 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 239 AATTTGAGATTATACATTTTGGGGACAAGGTCATACTTGAAGACCCAGTAGAAAGTTGGC 298
Query 361 CGATCTGTGATTGTTTGATTGCTTTCTATTCCTCTGGATATCCTCTTGAGAAAGTTCAAG 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 CGATTTGTGATTGTTTGATTGCTTTCTATTCCTCTGGATATCCTCTTGAGAAAGTTCAAG 358
Query 421 CATATTCTTCTTTAAGAAAGCCCTTTTTAGTGAATGAACTGGATCCTCAATATCTTCTTC 480
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 359 CATATTCTTCTTTAAGAAAGCCCTTTTTAGTGAATGAACTCGATCCCCAATATCTTCTTC 418
Query 481 ATGACCGCCGGAAAGTGTATGAGCATCTTGAGATGTATGGTATCCCAGTTCCTAGATATG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 ATGACCGCCGGAAAGTGTATGAGCATCTTGAGATGTATGGTATCCCAGTTCCTAGATATG 478
Query 541 CCTGTGTCAATAGAAAAGTACCAGACGAAGATCTTGATTATTTCGTCGAGGAAGAAGATT 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CTTGTGTCAATAGAAAAGTACCAGACGAAGATCTTGATTATTTCGTCGAGGAAGAAGATT 538
Query 601 TTGTTGAGGTTAAAGGTGAACGATTCTGGAAGCCATTTGTGGAAAAGCCCGTCAATGGAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TTGTTGAGGTTAAAGGTGAACGATTCTGGAAGCCATTTGTGGAAAAGCCCGTCAATGGAG 598
Query 661 ATGACCATAGTATCATGATATACTACCCTAGCTCAGCAGGTGGAGGCATGAAAGAATTGT 720
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 599 ATGACCATAGTATAATGATATACTACCCTAGCTCAGCTGGTGGAGGCATGAAAGAATTGT 658
Query 721 TTCGTAAGGTTGGGAATCGATCAAGTGAGTTTCATCCTGATGTCAGAAGAGTAAGGAGGG 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 659 TTCGTAAGGTTGGGAATCGATCAAGTGAGTTTCATCCTGATGTCAGAAGAGTAAGGAGAG 718
Query 781 AAGGTTCTTATATATACGAGGAGTTTATGCCTACTGGAGGAACTGATGTCAAGGTCTACA 840
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 719 AAGGTTCTTATATATATGAGGAGTTTATGCCTACTGGGGGAACTGATGTCAAGGTCTACA 778
Query 841 CTGTGGGTCCCGAATATGCACACGCTGAAGCAAGAAAATCACCGGTTGTTGATGGTGTAG 900
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 779 CTGTGGGTCCCGAATATGCACACGCTGAAGCAAGAAAATCACCTGTTGTTGATGGTGTAG 838
Query 901 TAATGAGGAATCCAGATGGGAAGGAAGTGAGATATCCAGTTTTACTTACACCTGCTGAGA 960
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TAATGAGAAATCCAGATGGGAAGGAAGTGAGATATCCAGTTTTACTTACACCTGCTGAGA 898
Query 961 AGCAAATGGCGAGAGAAGTTTGCATTGCATTTAGGCAAGCGGTCTGCGGTTTTGATCTCC 1020
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 899 AACAAATGGCGAGAGAAGTTTGCATTGCATTTAGGCAAGCGGTTTGCGGTTTTGATCTCC 958
Query 1021 TACGATCTGAGGGAAGTTCATATGTTTGTGACGTAAATGGATGGAGCTTTGTGAAGAACT 1080
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 959 TACGATCTGAGGGAAGTTCATATGTTTGTGACGTAAATGGATGGAGTTTTGTGAAGAACT 1018
Query 1081 CCTATAAGTATTACGACGATGCAGCTTGTGTGCTACGGAAAATGTTTTTGGATGCAAAGG 1140
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1019 CCTATAAGTATTACGACGATGCTGCTTGTGTGCTACGGAAAATGTTTTTGGATGCAAAGG 1078
Query 1141 CTCCTCATCTGTCTTCAACAATTCCTCCCATTCTCCCATGGAAAATCAACGAACCTGTCC 1200
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1079 CTCCTCATCTTTCTTCAACAATTCCTCCCATTCTGCCATGGAAAATCAACGAACCTGTCC 1138
Query 1201 AATCTAATGAAGGTCTTACTCGCCAAGGAAGTGGCATCATTGGAACTTTTGGGCAGTCAG 1260
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1139 AATCTAATGAAGGTCTTACCCGCCAAGGAAGTGGCATCATCGGAACTTTTGGGCAGTCAG 1198
Query 1261 AGGAGCTACGCTGTGTCATTGCTGTTGTTCGGCATGGTGATAGAACCCCCAAGCAGAAAG 1320
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1199 AGGAGCTACGCTGTGTCATTGCTATTGTTCGGCATGGTGATAGAACCCCCAAGCAGAAAG 1258
Query 1321 TGAAACTAAAAGTTACAGAGGAGAAACTGTTAAACCTGATGTTGAAGTACAATGGAGGAA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAAACTAAAAGTTACAGAGGAGAAACTGTTAAACCTGATGTTGAAGTACAATGGAGGAA 1318
Query 1381 AACCAAGAGCTGAGACAAAACTTAAAAGTGCCGTCCAATTGCAAGATCTATTGGATGCCA 1440
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1319 AACCAAGAGCTGAGACAAAACTTAAAACTGCCGTCCAATTGCAAGATCTATTGGATGCCA 1378
Query 1441 CAAGAATGTTAGTTCCTCGTACAAGATCAGGTGAAAGTGATAGTGATGCAGAAGACCTTG 1500
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1379 CAAGAATGTTAATTCCTCGTGCAAGATCAGGTGAAAGTGATAGTGATGCAGAAGACCTTG 1438
Query 1501 AACACGCTGACAAGCTTCGGCAAGTTAAAGCCGTTCTTGAAGAGGGTGGACATTTCTCTG 1560
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1439 AACACGCTGACAAGCTTCGGCAAGTTAAAGCCGTTCTTGAAGAGGGTGGGCATTTCTCTG 1498
Query 1561 GCATATACAGGAAGGTTCAACTGAAGCCGTTGAAATGGGTTAACGTACCAAAAAGTGATG 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 GCATATACAGGAAGGTTCAACTGAAGCCGTTGAAATGGGTTAACGTACCAAAAAGTGATG 1558
Query 1621 GTGAAGGTGAAGAGGAACGCCCAGTGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTTC 1680
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 GTGAAGGCGAAGAGGAACGCCCAGTGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTTC 1618
Query 1681 TAACTCATGCTGGTAGAAAACAGGCCGAAGAACTTGGTAGATACTTTCGAAACAATATGT 1740
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1619 TAACTCATGCTGGTAGAAAGCAGGCCGAAGAGCTTGGTAGATACTTTCGAAACAATATGT 1678
Query 1741 ATCCAGGGGAAGGTACCGGTTTGCTCCGTCTCCATAGCACATACCGTCACGACCTTAAAA 1800
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1679 ATCCAGGGGAAGGTACCGGTTTGCTCCGTCTCCATAGTACATACCGTCACGACCTTAAAA 1738
Query 1801 TTTACAGCTCTGACGAGGGGCGTGTTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTGC 1860
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 TTTACAGCTCTGACGAGGGACGTGTTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTGC 1798
Query 1861 TTGACCTAGAAGGACAGCTGACCCCAATCCTGGTTTCTCTGGTCAGTAAGGACTCTTCCA 1920
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1799 TTGACCTAGAAGGACAGCTGACCCCAATCCTGGTTTCTCTGGTAAGTAAGGACTCTTCCA 1858
Query 1921 TGTTGGATGGCCTTGATAATGCTAGCAGTGAAATGGAAGCAGCTAAGGCTCAACTGAATG 1980
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1859 TGTTGGATGGCCTTGATAATGCCAGCAGTGAAATGGAAGCAGCTAAGGCTCAACTGAATG 1918
Query 1981 AGATCATAACCGCCGGCTCAAAGATGGTAGATGATTACGTCTCTTCTGAATTACCTTGGA 2040
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1919 AGATCATAACCGCCGGCTCAAAGATGGTACATGATCACGTCTCTTCTGAATTACCTTGGA 1978
Query 2041 TGACTGATGGGGCTGGACTTCCTCCTCACGCTGATGAGCACCTACCTGAATTGGTAAAAT 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 TGACTGATGGGGCTGGACTTCCTCCTCACGCTGATGAGCACCTACCTGAATTGGTAAAAT 2038
Query 2101 TAGCTAAAAAGGTGACTGAACAAGTGAGGCTACTTGCACAAGATGAACACGAGAATCTCG 2160
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2039 TAGCTAAAAAGGTGACTGAACAAGTAAGGCTACTTGCACAAGATGAACACGAGAATCTCG 2098
Query 2161 CTGAGCCTAGCGCTTATGATGTAGTCCCTCCATATGATCAAGCTAAGGCCCTTGGCAAGT 2220
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2099 CTGAGCCTAGCGCTTATGATGTAGTCCCTCCATATGATCAAGCCAAGGCCCTTGGCAAGT 2158
Query 2221 CAAACATTGACGTTGGTCGGATTGCTGCTGGATTACCTTGTGGTAGTGAAGGGTTCCTTT 2280
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2159 CAAACATTGACGTTGGTCGGATTGCTGCCGGATTACCTTGTGGTAGTGAAGGGTTCCTTT 2218
Query 2281 TGATGTTTGCTCGATGGAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGACCGGT 2340
|||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2219 TGATGTTTGCCCGGTGGAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGAGCGGT 2278
Query 2341 TTGACATAACGCAGATTCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAATT 2400
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 TTGACATTACGCAGATTCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAATT 2338
Query 2401 CTCATCTCGATCTAAAAGGATTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGATG 2460
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2339 CTCATCTCGATCTAAAAGGACTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGATG 2398
Query 2461 GTGTAATCCCAAATGAGTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAGA 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 GTGTAATCCCAAATGAGTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAGA 2458
Query 2521 TTGCACGGCGCCTGCTGGGTAAGATCCTGATTGACTTGAGGAACACTCGAGAAGAGGCCA 2580
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 2459 TTGCACGGCGCCTGCTGGGTAAAATCCTTATTGACTTGAGGAACACTCGAGAAGAGGCCA 2518
Query 2581 TGAGTGTTGCTGAATTGAAGAACAGTCAAGATCAAGTTTCAGTGTCATTGTATTCGTCAA 2640
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2519 TGAGTGTTGCTGAATTGAAGAACAGTCAAGATCAAGTCTCAGTGTCATTGTATTCGTCAA 2578
Query 2641 GAAAGGAGGATAGATACAGTCAACCAAAACTTTTCGTTAAAAGCGATGAGTTGAGACGGC 2700
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2579 GAAAGGAGGATAGATATAGTCAACCAAAACTTTTCGTTAAAAGCGATGAGTTGAGACGGC 2638
Query 2701 CTAGCACTGGAGAGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACCGACTCGATC 2760
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 2639 CTAGCACTGGAGAGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACAGACTAGATC 2698
Query 2761 CAAAGTATGCAAATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTTACAT 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2699 CAAAGTATGCAAATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTCACAT 2758
Query 2821 CTGAATCACATATTCATTCTCTGATGAACGTTCTACGGTATTGTAACCTTGACGAATCTC 2880
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2759 CTGAATCACATATTCACTCTCTGATGAACGTTCTACGGTATTGTAATCTTGACGAATCTC 2818
Query 2881 TTCAAGGAGAAGAAAGTCTGGTCTGCCAAAGCGCATTGGATCGTCTATGTAAAACCAAAG 2940
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2819 TTCAAGGAGAAGAAAGTCTGGTCTGCCAAAGCGCGTTGGATCGTCTATGTAAAACCAAAG 2878
Query 2941 AACTCGATTACATGAGCTATGTTGTCCTAAGACTGTTTGAGAACACTGAGA 2991
|||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2879 AACTTGATTACATGAGCTACGTTGTCCTAAGGCTGTTTGAGAACACTGAGA 2929
Score = 630 bits (341), Expect = 2e-179
Identities = 403/432 (93%), Gaps = 8/432 (2%)
Strand=Plus/Plus
Query 2986 CTG-AGATATCTCTGGACGACCCGAAACGATTCAGAATCGAACTTACATTTAGCCGTGGC 3044
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2953 CTGCAGATATCTCTGGACGACCCGAAACGATTTAGAATCGAACTTACATTTAGCCGTGGC 3012
Query 3045 GCAGATTTATCTCCCTTAGAGAAGAAGGACGAGGAAGCAGAATCATTGCTTCGGGAACAC 3104
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3013 GCAGATTTGTCTCCCTTAGAGAAGAAGGACGAGGAAGCAGAATCATTGCTTCGAGAACAC 3072
Query 3105 ACACTTCCGATAATGGGACCAGAGAGGCTTCAAGAGGTTGGTTCATGTTTGACTCTCGAG 3164
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 3073 ACACTTCCGATAATGGGACCAGAAAGGCTTCAAGAGGTTGGTTCATGTTTGACCCTCGAG 3132
Query 3165 ACAATGGAGAAGATGATACGGCCATTTGCAATGCCGGCAGAGGATTTCCCTCCGCCGTCA 3224
|||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct 3133 ACAATGGAGAAGATGATACGTCCATTTGCAATGCCAGCCGAGGATTTCCCTCCACCGTGT 3192
Query 3225 ACTCCGGCAGGCTTCTCCGGATACTTCTCCAAAAGCGCCGCCGTTCTGGAGCGTCTTGTA 3284
||||| |||||||||||||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct 3193 ACTCCAGCAGGCTTCTCCGGTTACTTCTCTAAAAGCGCCGCTGTTCTCGAACGTCTTGTT 3252
Query 3285 AAACTTTGGCCCTTCCACAAGAACACCTCTAATGGCAAAAGCTAAACGCCAACAAAGTGG 3344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3253 AAACTTTGGCCCTTCCACAAGAACACCTCTAATGGCAAAAGCTAAACGCCAACAAAGTGG 3312
Query 3345 ---A-T---GACTAATGAATGATGATGATATTCCTAATTCATTTAATTTTTGAAACAAAA 3397
| | ||||||||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct 3313 GTGACTAATGACTAATGAATGATGATGATATTCCTAATCCATTTATTTTTTGAATCAAAA 3372
Query 3398 TTTTGAATTGTT 3409
||||||||||||
Sbjct 3373 TTTTGAATTGTT 3384
> AT3G01310.1 | Symbols: | Phosphoglycerate mutase-like family
protein | chr3:94177-101977 REVERSE LENGTH=3521
Length=3521
Score = 3491 bits (1890), Expect = 0.0
Identities = 2751/3161 (87%), Gaps = 82/3161 (3%)
Strand=Plus/Plus
Query 176 GAGAATGGGGTTGGAAGAAGGAGC-A--GGTGTTGATAAGAAGATAAAGATTGGAGTCTG 232
|||||||| | ||||||||||||| | ||||||| | ||||||||||||||||||||||
Sbjct 181 GAGAATGGAGATGGAAGAAGGAGCAAGTGGTGTTGGTGAGAAGATAAAGATTGGAGTCTG 240
Query 233 CGTCATGG--AA-AA---G--A----------AGGTTTTCTCAGCTCCCATGGGACAAAT 274
|||||||| || || | | |||||||||||||||||||||| ||||
Sbjct 241 CGTCATGGAAAAGAAGGTGAAATGCGGCTCCGAGGTTTTCTCAGCTCCCATGGGGGAAAT 300
Query 275 TATGGACAGGA-TACACG-CCTTTGGCGAATTTGAGAT-TATACATTTTGGGGATAAGGT 331
| | |||| || | || | | ||||| ||||||||||| | |||||||||||||||| ||
Sbjct 301 TCTCGACA-GACTCCA-GTCTTTTGGTGAATTTGAGATCT-TACATTTTGGGGATAAAGT 357
Query 332 CATACTTGAAGACCCAGTAGAAAGTTGGCCGATCTGTGATTGTTTGATTGC-TTTCTATT 390
||||||||||| ||| ||||||||||||| || |||||||| |||||||| |||| |||
Sbjct 358 TATACTTGAAGATCCAATAGAAAGTTGGCCCATTTGTGATTGCTTGATTGCTTTTC-ATT 416
Query 391 CCTCTGGATATCCTCTTGAGAAAGTTCAAGCATATTCTTCTTTAAGAAAGCCCTTTTTAG 450
|||||||||||||||||||||| | ||| |||||| || ||||||||||||| |||||||
Sbjct 417 CCTCTGGATATCCTCTTGAGAAGGCTCAGGCATATGCTGCTTTAAGAAAGCCATTTTTAG 476
Query 451 TGAATGAACTGGATCCTCAATATCTTCTTCATGACCGCCGGAAAGTGTATGAGCATCTTG 510
|||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 477 TGAATGAACTTGATCCGCAATATCTTCTTCATGATCGCCGGAAGGTGTATGAGCATCTTG 536
Query 511 AGATGTATGGTATCCCAGTTCCTAGATATGCCTGTGTCAATAGAAAAGTACCAGA-CGAA 569
|||||||||| |||||||||||||| ||||| |||||||||||||| |||||| | | ||
Sbjct 537 AGATGTATGGCATCCCAGTTCCTAGGTATGCTTGTGTCAATAGAAAGGTACCAAATC-AA 595
Query 570 GATCTTGATTATTTCGTCGAGGAAGAAGATTTTGTTGAGGTTAAAGGTGAACGATTCTGG 629
|| ||| ||||||| |||||||||||||||||||||||||| | |||||||| ||||||
Sbjct 596 GACCTTCATTATTTTGTCGAGGAAGAAGATTTTGTTGAGGTCCATGGTGAACGCTTCTGG 655
Query 630 AAGCCATTTGTGGAAAAGCCCGTCAATGGAGATGACCATAGTATCATGATATACTACCCT 689
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 656 AAGCCATTTGTGGAAAAGCCTGTCAATGGAGATGACCATAGTATAATGATATACTACCCT 715
Query 690 AGCTCAGCAGGTGGAGGCATGAAAGAATTGTTTCGTAAGGTTGGGAATCGATCAAGTGAG 749
||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||
Sbjct 716 AGCTCGGCAGGTGGAGGCATGAAAGAATTGTTTCGCAAGATTGGGAACCGATCAAGTGAA 775
Query 750 TTTCATCCTGATGTCAGAAGAGTAAGGAGGGAAGGTTCTTATATATACGAGGAGTTTAT- 808
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 776 TTTCATCCTGACGTCAGAAGGGTAAGGAGAGAAGGCTCTTATATATACGAGGAGTTTATG 835
Query 809 GCCTACTGGAGGAACTGATGTCAAGGTCTACACTGTGGGTCCCGAATATGCACACGCTGA 868
||| || ||||||||||||||||||||||| || |||||||| ||||| ||||| |||||
Sbjct 836 GCC-ACCGGAGGAACTGATGTCAAGGTCTATACAGTGGGTCCTGAATACGCACATGCTGA 894
Query 869 AGCAAGAAAATCACCGGTTGTTGATGGTGTAGTAATGAGGAATCCAGATGGGAAGGAAGT 928
||||||||| ||||| |||||||||||||| || ||||||||| ||||||||||||||||
Sbjct 895 AGCAAGAAAGTCACCTGTTGTTGATGGTGTTGTTATGAGGAATACAGATGGGAAGGAAGT 954
Query 929 GAGATATCCAGTTTTACTTACACCTGCTGAGAAGCAAATGGCGAGAGAAGTTTGCATTGC 988
|||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 955 GAGATATCCAGTATTGCTTACACCTGCTGAAAAGCAAATGGCTAGAGAAGTTTGCATTGC 1014
Query 989 ATTTAGGCAAGCGGTCTGCGGTTTTGATCTCCTACGATCTGAGGGAAGTTCATATGTTTG 1048
|||||||||||||||||| || |||||||| |||||||||||||| |||||||||||||
Sbjct 1015 ATTTAGGCAAGCGGTCTGTGGGTTTGATCTTCTACGATCTGAGGGCTGTTCATATGTTTG 1074
Query 1049 TGACGTAAATGGATGGAGCTTTGTGAAGAACTCCTATAAGTATTACGACGATGCAGCTTG 1108
||| || ||||||||||| |||||||||||||| || |||||||| |||||||| || ||
Sbjct 1075 TGATGTCAATGGATGGAGTTTTGTGAAGAACTCATACAAGTATTATGACGATGCTGCGTG 1134
Query 1109 TGTGCTACGGAAAATGTTTTTGGATGCAAAGGCTCCTCATCTGTCTTCAACAATTCCTCC 1168
||||||| ||||||||| |||||||||||| ||||||||||| || || || |||||||
Sbjct 1135 TGTGCTAAGGAAAATGTGTTTGGATGCAAAAGCTCCTCATCTCTCATCCACTCTTCCTCC 1194
Query 1169 CATTC-TCCCATGGAAAATCAACGAACCTGTCCAATCTAATGAAGGTCTTACTCGCCAAG 1227
|| | | |||||||| |||| |||||||| ||||||||||||||||| |||||||| |
Sbjct 1195 CA-CCTTGCCATGGAAGGTCAATGAACCTGTACAATCTAATGAAGGTCTAACTCGCCAGG 1253
Query 1228 GAAGTGGCATCATTGGAACTTTTGGGCAGTCAGAGGAGCTACGCTGTGTCATTGCTGTTG 1287
||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1254 GAAGTGGCATCATCGGCACTTTTGGGCAGTCAGAAGAGCTACGTTGTGTCATTGCTGTTG 1313
Query 1288 TTCGGCATGGTGATAGAACCCCCAAGCAGAAAGTGAAACTAAAAGTTACAGAGGAGAAAC 1347
|||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1314 TTCGACATGGCGATAGAACTCCCAAGCAGAAAGTGAAACTAAAAGTTACAGAGGAAAAAC 1373
Query 1348 TGTTAAACCTGATGTTGAAGTACAATGGAGGAAAACCAAGAGCTGAGACAAAACTTAAAA 1407
| |||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| |
Sbjct 1374 TATTAAACCTAATGTTGAAGTACAATGGTGGAAAGCCAAGAGCTGAGACCAAACTTAAGA 1433
Query 1408 GTGCCGTCCAATTGCAAGATCTATTGGATGCCACAAGAATGTTAGTTCCTCGTACAAGAT 1467
|||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1434 GTGCCGTCCAGTTGCAAGATCTATTAGATGCCACAAGAATGTTAGTTCCCCGTACAAGAC 1493
Query 1468 CA-G--GTGAAAGTGATAGTGATGCAGAAGACCTTGAACACGCTGACAAGCTTCGGCAAG 1524
|| | |||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1494 CAGGTCGTGAAAGTGATAGTGATGCAGAAGACCTTGAACATGCTGAGAAGCTTCGGCAAG 1553
Query 1525 TTAAAGCCGTTCTTGAAGAGGGTGGACATTTCTCTGGCATATACAGGAAGGTTCAACTGA 1584
||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1554 TTAAAGCAGTCCTTGAAGAGGGAGGACATTTCTCTGGTATATACAGGAAGGTTCAACTGA 1613
Query 1585 AGCCGTTGAAATGGGTTAACGTACCAAAAAGTGATGGTGAAGGTGAAGAGGAACGCCCAG 1644
||||| |||| |||||||| |||||||||| |||||||| || ||||| ||| | ||||
Sbjct 1614 AGCCGCTGAAGTGGGTTAAAATACCAAAAAGCGATGGTGATGGCGAAGAAGAAAGACCAG 1673
Query 1645 TGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTTCTAACTCATGCTGGTAGAAAACAGG 1704
| || || ||||||||||||||||| || |||||| |||| || ||||||||||| ||||
Sbjct 1674 TAGAGGCCCTTATGGTTCTGAAATATGGCGGTGTTTTAACACACGCTGGTAGAAAGCAGG 1733
Query 1705 CCGAAGAACTTGGTAGATACTTTCGAAACAATATGTATCCAGGGGAAGGTACCGGTTTGC 1764
| ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 1734 CAGAAGAACTTGGTAGATACTTTCGAAACAATATGTATCCAGGTGAAGGGACTGGTTTGC 1793
Query 1765 TCCGTCTCCATAGCACATACCGTCACGACCTTAAAATTTACAGCTCTGACGAGGGGCGTG 1824
| ||||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1794 TTCGTCTCCATAGTACGTACCGTCATGACCTTAAAATTTACAGCTCTGACGAGGGACGTG 1853
Query 1825 TTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTGCTTGACCTAGAAGGACAGCTGACCC 1884
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1854 TTCAGATGTCTGCAGCGGCTTTTGCTAAAGGCCTGCTTGACCTAGAAGGACAGCTGACGC 1913
Query 1885 CAATCCTGGTTTCTCTGGTCAGTAAGGACTCTTCCATGTTGGATGGCCTTGATAATGCTA 1944
|||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct 1914 CAATCCTGGTTTCTTTGGTTAGCAAGGACTCTTCCATGTTGGATGGTCTTGATAATGCCA 1973
Query 1945 GCAGTGAAATGGAAGCAGCTAAGGCTCA-ACTGAATGAGATCATAACCG-CCGGCTCAAA 2002
||| |||||||||||| || |||||| | | |||||||||| ||| || | ||| ||||
Sbjct 1974 GCATTGAAATGGAAGCGGCCAAGGCT-AGATTGAATGAGATTGTAA-CGTCTGGCACAAA 2031
Query 2003 GATGGTAGATGATTA-C--GTCTCTTCTG-A-A-TTACCTTGGATGACTGATGGGGCTGG 2056
|||| |||| || | | ||||| |||| | | || ||||||||||||||||| |||||
Sbjct 2032 GATGATAGACGACGACCAAGTCTCCTCTGAAGATTTCCCTTGGATGACTGATGGAGCTGG 2091
Query 2057 ACTTCCTCCTC-ACGCTGATGAGCACCTACCTGAATTGGTAAAATTAGCTAAAAAGGTGA 2115
||||||||| | ||||| |||| | ||||| |||| |||| |||||| |||| || ||||
Sbjct 2092 ACTTCCTCC-CAACGCTCATGAACTCCTACGTGAACTGGTGAAATTAACTAAGAATGTGA 2150
Query 2116 CTGAACAAGTGAGGCTACTTGCACA-AGATGAACACGAGAATCTCGCTGAGCCTAGCGCT 2174
|||||||||| || ||||||||| | |||||| ||||||| ||| ||||||| |
Sbjct 2151 CTGAACAAGTAAGACTACTTGCA-ATGGATGAAGACGAGAACCTCACTGAGCC-A----- 2203
Query 2175 TATGATGTAGTCCCTCCATATGATCAAGCTAAGGCCCTTGGCAAGTCAAACATTGAC-GT 2233
|| ||| || | ||||||||||||||||| || |||||||||||| ||||||||||| |
Sbjct 2204 TACGATATAATTCCTCCATATGATCAAGCAAAAGCCCTTGGCAAGACAAACATTGACAG- 2262
Query 2234 TGGTCGGATTGCTGCTGGATTACCTTGTGGTAGTGAAGGGTTCCTTTTGATGTTTGCTCG 2293
|| |||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct 2263 TGATCGGATTGCTTCTGGATTACCATGTGGTAGTGAAGGATTCCTTCTGATGTTTGCTCG 2322
Query 2294 ATGGAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGACCGGTTTGACATAACGCA 2353
|||| |||||| | |||||||||||||| ||||||| |||||| |||||||| || ||
Sbjct 2323 GTGGATAAAACTTGCTAGGGATCTCTACAATGAAAGAAAAGACCGATTTGACATCACACA 2382
Query 2354 GATTCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAATTCTCATCTCGATCT 2413
|||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2383 GATTCCGGATGTTTACGATTCATGCAAGTACGACCTGTTACATAATTCCCATCTCGATCT 2442
Query 2414 AAAAGGATTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGATGGTGTAATCCCAAA 2473
|||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 2443 AAAAGGATTAGATGAACTCTTCAAAGTAGCACAGTTACTTGCAGATGGTGTAATCCCAAA 2502
Query 2474 TGAGTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAGATTGCACGGCGCCT 2533
||||||||| |||||||| || |||||||| |||||||||||||||||||| |||||| |
Sbjct 2503 TGAGTATGGCATCAATCCGCAACAAAAGCTTAAAATCGGTTCAAAGATTGCTCGGCGCTT 2562
Query 2534 GCTGGGTAAGATCCTGATTGACTTGAGGAACACTCGAGAAGAGGCCA-TGAGTGTTGCTG 2592
|||| || ||| |||| ||||||||||| ||||||||||| | || |||| ||||| |
Sbjct 2563 AATGGGGAAAATCTTGATAGACTTGAGGAATACTCGAGAAGAAG-CACTGAGCGTTGCCG 2621
Query 2593 AATTG-AAGAACAGTCAAGATCAAGTTTCAGTGTCATTGTATTCGTCAAG-AAA-GGAGG 2649
| ||| ||||| || ||||| |||| || ||||| | ||| || | | ||| ||| |
Sbjct 2622 AGTTGAAAGAA-AGCCAAGAACAAG--TC-TTGTCA-T-TATCCGCCTCGCAAAGGGAAG 2675
Query 2650 ATAGATACAGTCAACCAAAACT-TTTCGTTAAAAGCGATGAGTTGAGACGGCCTAGCACT 2708
||||| | |||||||| || || ||| | || |||||||| |||||||| ||| ||||
Sbjct 2676 ATAGAAATAGTCAACCGAAGCTATTT-ATCAATAGCGATGAATTGAGACGACCTGGCAC- 2733
Query 2709 GGAGAGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACCGACTCGATCCAAAGTAT 2768
| | | ||||||| |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 2734 AG-GTG-ATAAAGATGAAGATGATGATAAAGAAACCAAATACCGATTAGATCCAAAGTAT 2791
Query 2769 GCAAATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTTACATCTGAATCA 2828
|||||||| | ||| |||||||||||||||||||| || |||||||| |||||||||||
Sbjct 2792 GCAAATGTGAAGACACCTGAACGTCATGTGAGGACTCGACTTTACTTCACATCTGAATCG 2851
Query 2829 CATATTCATTCTCTGATGAACGTTCTACGGTATTGTAACCTTGACGAATCTCTTCAAGGA 2888
||||||||||| || |||||||| || || || ||||||||||| |||||||| | ||||
Sbjct 2852 CATATTCATTCGCTCATGAACGTCCTTCGATACTGTAACCTTGATGAATCTCTCCTAGGA 2911
Query 2889 GAAGAAAGTCTGGTCTGCCAAAGCGCATTGGATCGTCTATGTAAAACCAAAGAACTCGAT 2948
|||||||| || | ||||||| ||| || || ||||| ||||||||||| |||||||||
Sbjct 2912 GAAGAAAGCCTCATTTGCCAAAACGCCTTAGAACGTCTCTGTAAAACCAAGGAACTCGAT 2971
Query 2949 TACATGAGCTATGTTGTCCTAAGACTGTTTGAGAACACTGAGATATCTCTGGACGACCCG 3008
|||||||| || |||||||||| || ||||||||||| ||| |||| || || ||||||
Sbjct 2972 TACATGAGTTACATTGTCCTAAGGCTCTTTGAGAACACCGAGGTATCACTTGAAGACCCG 3031
Query 3009 AAACGATTCAGAATCGAACTTACATTTAGCCGTGGCGCAGATTTATCTCCCTT-AGAGAA 3067
||| ||||| | || |||||||||||||||||||| || ||||| |||||||| || |||
Sbjct 3032 AAAAGATTCCGCATTGAACTTACATTTAGCCGTGGAGCTGATTTGTCTCCCTTAAG-GAA 3090
Query 3068 GAAGGACGAGGAAGCAGA-ATCATTGCTTCGGGAACACACACTTCCGATAATGGGACCAG 3126
|| ||||| || ||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct 3091 TAATGACGACGAGGCAGAGA-CATTGCTAAGGGAACACACACTTCCGATAATGGGACCAG 3149
Query 3127 AGAGGCTTCAAGAGGTTGGTTCATGTTTGA-CTCTCGAGACAATGGAGAAGATGATACGG 3185
||||||||||||| || ||||| ||||| | || | |||||||||||||| ||| | ||
Sbjct 3150 AGAGGCTTCAAGAAGTAGGTTCTTGTTTAAGCT-TGGAGACAATGGAGAAAATGGTTCGT 3208
Query 3186 CCATTTGCAATGCCGGCAGAGGATTTCCCTCCGCCGTCAACTCCGGCAGGCTTCTCCGGA 3245
|||||||| |||||||| || |||||||||||| |||| ||||||| || ||||| ||
Sbjct 3209 CCATTTGCTATGCCGGCGGAAGATTTCCCTCCGGCGTCCACTCCGGTTGGTTTCTCGGGT 3268
Query 3246 TACTTCTCCAAAAGCGCCGCCGTTCTGGAGCGTCTTGTAAA 3286
|||||||| ||||| || || || |||||||| || |||||
Sbjct 3269 TACTTCTCAAAAAGTGCTGCGGTGCTGGAGCGACTCGTAAA 3309
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171420444231
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5