BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488394
Length=1780
Score E
Sequences producing significant alignments: (Bits) Value
AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 2883 0.0
AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1181 0.0
AT5G39320.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1050 0.0
> AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr5:5027639-5030194 REVERSE LENGTH=1781
Length=1781
Score = 2883 bits (1561), Expect = 0.0
Identities = 1713/1786 (96%), Gaps = 12/1786 (1%)
Strand=Plus/Plus
Query 1 TCCATCGTCAGATTTAGCGATTTCACCTCCATTTTCTTCGATCAGTGTTAGAACCAGAGC 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 TCCATCGTCAGATTTAGCGATTTCACCTCCATTTTCTTCGATCAGTGCTAGAACCAGAGC 60
Query 61 CTACATAGCTCTCA-CTCTAAAGttttttttCAGTTTACAAGCAAAATGGTGAAGATTTG 119
|||| |||||| || || ||| | | |||||||||||||||||||||||||||||||
Sbjct 61 CTACCTAGCTCGCACCT-TAAGGAGGTGATTCAGTTTACAAGCAAAATGGTGAAGATTTG 119
Query 120 CTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCGGTCATTGCTCTCAAGTGTCC 179
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 120 CTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCTGTCATTGCTCTAAAGTGTCC 179
Query 180 ATCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGGATCAATGCATGGAACAGCGA 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 180 ATCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGGATCAATGCCTGGAACAGTGA 239
Query 240 CCAGCTT-CCAATCTATGAGCCTGGTCTCGATGATGTGGTTAAGCAGTGCCGTGGAAAGA 298
||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 240 TCAG-TTACCGATCTATGAGCCTGGTCTTGATGATGTCGTTAAGCAGTGCCGTGGAAAGA 298
Query 299 ATCTCTTCTTCAGCACTGATGTTGAGAAGCATGTGAGAGAGGCTGACATTGTTTTTGTGT 358
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 299 ATCTCTTCTTCAGCACCGATGTTGAGAAACATGTGAGAGAGGCTGACATTGTTTTTGTGT 358
Query 359 CTGTCAACACCCCGACTAAGACCCGTGGTCTTGGAGCTGGCAAAGCTGCGGATTTGACTT 418
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CTGTCAACACCCCTACTAAGACCCGTGGTCTTGGAGCTGGCAAAGCTGCGGATTTGACTT 418
Query 419 ACTGGGAGAGCGCTGCTCGTATGATTGCGGATGTTTCGGTTTCTGACAAGATTGTTGTTG 478
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 419 ACTGGGAGAGCGCTGCTCGTATGATTGCCGATGTTTCGGTTTCCGACAAGATTGTTGTTG 478
Query 479 AGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTGAGAAGATTCTTACCCACAATA 538
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 479 AGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTGAGAAGATTCTTACACACAACA 538
Query 539 GCAAAGGAATCAAATTCCAGATTTTGTCAAACCCTGAGTTCCTTGCTGAAGGAACCGCTA 598
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 539 GCAAAGGAATCAAATTCCAGATTCTGTCAAACCCTGAGTTCCTTGCTGAAGGAACCGCTA 598
Query 599 TTGAAGACCTTTTCATGCCTGACCGTGTCCTCATCGGTGGTCGTGAAACACCTGAAGGCT 658
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 599 TTGAAGACCTTTTCATGCCTGACCGTGTCCTCATCGGTGGTCGTGAAACAACTGAAGGCT 658
Query 659 TTGCAGCCGTCAAAGCCTTGAAAGACGTTTATTCCCAATGGGTCCCTGAAGAGAGAATCC 718
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 659 TTGCAGCCGTCAAAGCCTTGAAAGACATTTATGCCCAATGGGTCCCTGAAGAGAGAATCC 718
Query 719 TCACCACCAATCTCTGGTCTGCCGAGCTTTCCAAGCTTGCAGCTAACGCCTTCTTAGCCC 778
||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 719 TCACCACCAATCTATGGTCTGCCGAGCTTTCCAAGCTTGCAGCTAATGCCTTCCTAGCCC 778
Query 779 AGAGAATCTCATCAGTCAATGCAATGTCCGCTCTCTGTGAAGCAACTGGCGCCAATGTCT 838
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 779 AGAGAATCTCATCAGTCAATGCAATGTCCGCTCTCTGTGAGGCAACTGGCGCCAATGTCT 838
Query 839 CAGAGGTCTCTTACGCTGTGGGCAAAGACTCCCGGATTGGTCCCAAGTTCTTGAACTCGA 898
||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 839 CAGAGGTCTCTTATGCTGTGGGCAAAGACTCTCGTATTGGTCCCAAGTTCTTGAACTCTA 898
Query 899 GTGTTGGATTCGGAGGATCTTGTTTCCAGAAAGATATTCTCAACTTAGTCTACATCTGCG 958
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GTGTTGGGTTCGGAGGATCTTGTTTCCAGAAAGATATTCTCAACTTAGTCTACATCTGCG 958
Query 959 AATGCAACGGCTTACCCGAAGTTGCTGAGTACTGGAAACAAGTCATCAAGATCAACGACT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 AATGCAACGGCTTACCCGAAGTTGCTGAGTACTGGAAACAAGTCATCAAGATCAACGACT 1018
Query 1019 ACCAGAAAACCCGATTTGTTAACCGCATTGTCTCTTCAATGTTCAACACAGTCTCCAACA 1078
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1019 ACCAGAAAACCCGATTTGTTAACCGCATTGTCTCTTCAATGTTTAACACAGTCTCCAACA 1078
Query 1079 AAAAGATTGCGGTTCTCGGGTTCGCTTTCAAGAAAGACACAGGAGACACAAGAGAGACTC 1138
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 1079 AAAAGATTGCGGTTCTCGGCTTCGCTTTCAAGAAAGACACTGGAGACACTAGAGAGACTC 1138
Query 1139 CAGCCATTGATGTCTGCAAAGGTCTGTTAGGTGACAAAGCTCGTCTCAGCATCTACGACC 1198
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1139 CAGCCATTGATGTCTGCAAAGGTCTGTTAGGTGACAAGGCTCGTCTCAGCATCTACGACC 1198
Query 1199 CACAAGTCACTGAAGACCAGATCCAAAGAGACTTAACCATGAACAAATTCGACTGGGACC 1258
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CACAAGTCACTGAAGAGCAGATCCAAAGAGACTTAACCATGAACAAATTCGACTGGGACC 1258
Query 1259 ACCCGCTTCATCTCCAGCCCATGAGCCCCACCACTGTGAAACAAGTCTCAGTCGCTTGGG 1318
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1259 ACCCACTTCATCTCCAGCCCATGAGCCCCACCACTGTGAAGCAAGTCTCAGTCGCTTGGG 1318
Query 1319 ACGCATACACTGCAACCAAAGACGCCCACGGTATCTGCATTTTAACCGAGTGGGACGAGT 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 ACGCATACACTGCAACCAAAGACGCCCACGGTATCTGCATTTTAACCGAGTGGGACGAGT 1378
Query 1379 TCAAGAAACTCGATTTCCAGCGGATCTTTGAGAATATGCAGAAACCGGCTTTTGTTTTTG 1438
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 TCAAGAAACTTGATTTCCAGCGGATCTTTGAGAATATGCAGAAACCGGCTTTTGTTTTTG 1438
Query 1439 ACGGTAGAAATGTGGTCGACGCTGACAAACTCAGGCAAATTGGGTTTATTGTTTACTCCA 1498
|||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct 1439 ACGGTAGAAACGTGGTCGACGCTGATAAACTCAGGGAGATTGGGTTTATTGTTTACTCCA 1498
Query 1499 TTGGTAAGCCATTGGACCAGTGGCTCAAGGACATGCCTGCTCTTGCCTAAACAACAACCA 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 TTGGTAAGCCATTGGACCAGTGGCTCAAGGACATGCCTGCTCTTGCCTAAACAACAACCA 1558
Query 1559 AACCTCTTCCTTAGCTTATTTCTCCATTTTTTCCGAATTCTCATGAGTTTTTCCATATAT 1618
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 AACCTCTTCCTTAGCTTTTTTCTCCATTTTTTCCGAATTCTCATGAGTTTTTCCATATAT 1618
Query 1619 TTTTAACTAT-GT-T-TT-GATCAATAATTGTTGCtttttttttttCTTCGTTTTATGAA 1674
|||||||| || | || |||||||||||||| ||||| || || | | | |||||||
Sbjct 1619 CTTTAACTACAGTATGTTTGATCAATAATTGTTTCTTTTGTTCTT-C--C-TATTATGAA 1674
Query 1675 TTCCAACAGAGATTTTAGGTTTGGTTTTTGTTGGTAATTATGTACCTTGGGTTATCAAAT 1734
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1675 TTCCTACAGAGATTTTAGGTTTGGTTCTTGTTGGTAATTATGTACCTTGGGTTATCAAAT 1734
Query 1735 ATTGTAAGCTTTTCGAGTATTATTTTCATAATATAAAAGTTTTCCC 1780
|||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1735 ATTGTAAGCTTTTCGAATATTACTTTCATAATATAAAAGTTTTCCC 1780
> AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr3:11267091-11269229 REVERSE LENGTH=1794
Length=1794
Score = 1181 bits (639), Expect = 0.0
Identities = 1202/1471 (82%), Gaps = 49/1471 (3%)
Strand=Plus/Plus
Query 103 AAA-ATGGTGAAGATTTGCTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCGGT 161
||| ||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 64 AAAGATGGTGAAGATATGTTGTATTGGAGCTGGGTATGTTGGTGGACCAACAATGGCAGT 123
Query 162 CATTGC-TCTCAAGTGTCCA-TCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGG 219
||||| | | || |||||| | ||||||||||| ||||||||||||||||| ||| |
Sbjct 124 GATTGCAT-TGAAATGTCCAGAC-GTTGAAGTAGCGGTTGTTGATATCTCTGTACCACGT 181
Query 220 ATCAATGCATGGAACAGCGACCA-GCTTCCAATCTATGAGCCTGGTCTCGATGATGTGGT 278
||||| || |||||||| || || |||||| || || ||||||||||| |||||||| ||
Sbjct 182 ATCAACGCTTGGAACAGTGA-CACGCTTCCGATTTACGAGCCTGGTCTTGATGATGTTGT 240
Query 279 TAAGCAGTGCCGTGGAAAGAATCTCTTCTTCAGCACTGATGTTGAGAAGCATGTGAGAGA 338
||||| |||||||| ||||| || ||||| || |||||||||||||| ||||| || ||
Sbjct 241 GAAGCAATGCCGTGGCAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACATGTTAGGGA 300
Query 339 GGCTGACATTGTTTTTGTGTCTGTCAACACCCCGACTAAGACCCGTGGTCTTGGAGCTGG 398
||||| ||||| ||||| ||||||||||| ||||||||||| | |||||||| |||||
Sbjct 301 AGCTGATATTGTGTTTGTTTCTGTCAACACACCGACTAAGACTAGAGGTCTTGGTGCTGG 360
Query 399 CAAAGCTGCGGAT-TTGACTTACTGGGAGAGCGCTGCTCGTATGATTGCGGATGTTTCGG 457
|||||||||||| || || ||||||||||||||||| |||||||| || ||||||||||
Sbjct 361 TAAAGCTGCGGATCTT-ACGTACTGGGAGAGCGCTGCGCGTATGATCGCTGATGTTTCGG 419
Query 458 TTTCTGACAAGATTGTTGTTGAGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTG 517
| || || |||||||| ||||||||||| |||||||| || ||||| || || || ||||
Sbjct 420 TATCGGATAAGATTGTCGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAAGCTATTG 479
Query 518 AGAAGATTCTT-ACCCACAATAGCAAAGGAATCAAATTCCAGATT-TTGTC-AAACCCTG 574
|||||||| || || || || || ||||| || || || |||||| || || || ||| |
Sbjct 480 AGAAGATT-TTGACACATAACAGTAAAGGGATTAAGTTTCAGATTCTT-TCGAATCCC-G 536
Query 575 AGTTCCTT-GCTGAAGGAACCGCTATTGAA-GACCT-TTTCATGCCTGACCGTGTCCTCA 631
|||| || || ||||||||||| ||| || ||||| ||| || || |||||||| || |
Sbjct 537 AGTT-TTTGGCGGAAGGAACCGCGATT-AAGGACCTATTTAAT-CCGGACCGTGTTCTTA 593
Query 632 TCGGTGGTCGTGAAACACCTGAAGGCTTTGCAGCCGTCAAAGCCT-TGAAAG-ACGTTTA 689
|||| || || ||||| || ||||| ||| ||| || || || | ||| | || ||
Sbjct 594 TCGGAGGGCGGGAAACCCCAGAAGGGTTTAAAGCGGT-GCAGACTCT-CAAGAATGTGTA 651
Query 690 TTCCCAATGGGTCCCTGAA-GAGAGAATCCTCACCACCAATCTCTGGTCTGCCGAGCTTT 748
| | || ||||| |||||| | | |||| | || ||||||||||||||||| ||||| |
Sbjct 652 TGCACACTGGGTTCCTGAAGGCCA-AATCATAACAACCAATCTCTGGTCTGCTGAGCTGT 710
Query 749 CCAAGCTTGCAGCTAACGCCTTCTTAGCCCAGAGAATCTCATCAGTCAATGCAATGTCCG 808
|||||||||| || ||||| ||||| || || || || |||||||| ||||| ||||| |
Sbjct 711 CCAAGCTTGCGGCAAACGCTTTCTTGGCTCAAAGGATTTCATCAGTGAATGCTATGTCGG 770
Query 809 CTCTCTGTGAAGCAACTGGCGCCA-ATGTCTCAG-AGGTCTCTTACGCTGTGGGCAAAGA 866
|||| |||||||| || |||| || ||||| | | | || |||||||| || || | |||
Sbjct 771 CTCTGTGTGAAGCCACAGGCG-CAGATGTCAC-GCAAGTGTCTTACGCGGTTGGTACAGA 828
Query 867 CTCCCGGATTGGTCCCAAGTTCTTGAACTCGAGTGTTGGATTCGGAGGATCTTGTTTCCA 926
||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 829 CTCAAGGATTGGTCCCAAGTTCTTGAACTCGAGTGTTGGATTCGGTGGTTCGTGTTTCCA 888
Query 927 GAAAGATATTCTCAA-CTTAGTCTACATCTGCGAATGCAACGG-CTTACCCG-AAGTTGC 983
||| || ||||| || ||| ||||||||||| || |||||||| || |||| |||| ||
Sbjct 889 GAAGGACATTCTGAATCTT-GTCTACATCTGTGAGTGCAACGGACT--CCCGGAAGTGGC 945
Query 984 TGAGTACTGGAAACAAGTCATCAAGATCAACGACTACCAGAAAACCCGATTTGTTAACCG 1043
||||||||||| ||||||||||||||||| ||||||||||| | ||| || || |||||
Sbjct 946 AGAGTACTGGAAGCAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCG 1005
Query 1044 CATTGTCTCTTCAATGTTCAACACAGTCTCCAACAAAAAGATTGCGGTTCTCGGGTTCGC 1103
|||| || || ||||||||| | || || ||||| ||||||||||||||||| |||||
Sbjct 1006 TGTTGTTTCCTCCATGTTCAACTCTGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGC 1065
Query 1104 TTTCAAGAAAGACACAGGAGACACAAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTCT 1163
|||||||||||||| || |||||||| |||||||||||||| ||||| ||||| |||||
Sbjct 1066 ATTCAAGAAAGACACCGGTGACACAAGGGAGACTCCAGCCATCGATGTGTGCAAGGGTCT 1125
Query 1164 GTTAGGTGACAAAGCTCGTCTCAGCATCTACGACCCACAAGTCACTGAAGACCAGATCCA 1223
|||| |||||||| | || ||||| |||||||||||||| ||||| || ||||||||
Sbjct 1126 TTTAGAAGACAAAGCAAGGCTAAGCATTTACGACCCACAAGTGACTGAGGATCAGATCCA 1185
Query 1224 AAGAGACTTAACCATGAACAAATTCGACTGGGACCACCCGCTTCATCTCCAGCCCATGAG 1283
|| || ||| |||||||||| |||||||||||||| || || ||| | ||||| |||||
Sbjct 1186 GAGGGATTTATCCATGAACAAGTTCGACTGGGACCATCCTCTACATTTGCAGCCAATGAG 1245
Query 1284 CCCCACCACTGTGAAACAAGTCTCAGTCGCTTGGGACGCATAC-ACTGCAACCAAAGACG 1342
||| || || ||||||||||| | || |||||||||||||| | ||||| || ||||
Sbjct 1246 CCCAACAACAGTGAAACAAGTGACCGTTACTTGGGACGCATACGAA-GCAACTAAGGACG 1304
Query 1343 CCCACGGTATCTGCATTTTAACCGAGTGGGACGAGTTCAAGAAACTCGATTTCCAGCGGA 1402
| |||||||||||||| | ||||||||||| ||||||||||| || ||||||||| ||
Sbjct 1305 CTCACGGTATCTGCATCATGACCGAGTGGGATGAGTTCAAGAACCTTGATTTCCAGAAGA 1364
Query 1403 TCTTTGAGAATATGCAGAAACCGGCTTTTGTTTTTGACGGTAGAAATGTGGTCGACGCTG 1462
||||||| || ||||||||||| ||||| || || || || ||||| | | || |||
Sbjct 1365 TCTTTGACAACATGCAGAAACCAGCTTTCGTGTTCGATGGAAGAAACATTAT-GAATCTG 1423
Query 1463 ACAAA--CTCAGGCAAATTGGGTTT-ATTGTTTACTCCATTGGTAAGCCAT-TGGACCAG 1518
|||| || ||| | ||||| ||| ||||||||||||||||||||||| | | ||| |
Sbjct 1424 -CAAAAGCTAAGGGAGATTGG-TTTCATTGTTTACTCCATTGGTAAGCC-TCTCGACGAC 1480
Query 1519 TGGCTCAAGGACATGCCTGCTC-TTGCCTAA 1548
|||||||||||||||||||| | ||||||||
Sbjct 1481 TGGCTCAAGGACATGCCTGC-CGTTGCCTAA 1510
> AT5G39320.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr5:15742762-15744943 FORWARD LENGTH=1792
Length=1792
Score = 1050 bits (568), Expect = 0.0
Identities = 1190/1485 (80%), Gaps = 63/1485 (4%)
Strand=Plus/Plus
Query 102 CAAAATGGTGAAGATTTGCTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCGGT 161
||||||||||||||| || || ||||||||||||||||| || || ||||| ||||| ||
Sbjct 99 CAAAATGGTGAAGATCTGTTGTATTGGAGCTGGATATGTAGGAGGACCAACAATGGCAGT 158
Query 162 CATTGC-TCTCAAGTGTCCATCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGGA 220
||||| | | || |||||| | ||||||| || ||||||||||||||||| || || |
Sbjct 159 GATTGCAT-TGAAATGTCCAGATATTGAAGTGGCAGTTGTTGATATCTCTGTTCCTAGAA 217
Query 221 TCAATGCATGGAACAGCGACCAGCTTCCAATCTATGAGCCTGGTCTCGATGATGTGGTTA 280
|||| || |||||||| || |||||||| || || ||||| ||||| || ||| | ||||
Sbjct 218 TCAACGCTTGGAACAGTGATCAGCTTCCGATTTACGAGCCAGGTCTTGACGATATCGTTA 277
Query 281 AGCAGTGCCGTGGAAAGAATCTCTTCTTCAGCACTGATGTTGAGAAGCATGTGAGAGAGG 340
|||| ||| | ||||||||||| |||||||| |||||||| ||||| ||||| ||||| |
Sbjct 278 AGCAATGCAGAGGAAAGAATCTTTTCTTCAGTACTGATGTGGAGAAACATGTTAGAGAAG 337
Query 341 CTGACATTGTTTTTGTGTCTGTCAACACCCCGACTAAGAC-CCGTGGTCTTGGAGCTGGC 399
|||| ||||| ||||| ||||| ||||| |||||||| || | |||||||||||||||
Sbjct 338 CTGATATTGTCTTTGTCTCTGTTAACACACCGACTAAAACGAC-TGGTCTTGGAGCTGGG 396
Query 400 AAAGCTGCGGATTTGACTTACTGGGAGAGCGCTGCTCGTATGATTGCGGATGTTTCGGTT 459
|||||||| ||| | ||||| |||||||| |||||||||||||| |||||||| ||||||
Sbjct 397 AAAGCTGCTGATCTCACTTATTGGGAGAGTGCTGCTCGTATGATCGCGGATGTATCGGTT 456
Query 460 TCTGACAAGATTGTTGTTGAGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTGAG 519
|||||||||||||||||||||||||| |||||||| || || || || || || ||||||
Sbjct 457 TCTGACAAGATTGTTGTTGAGAAATCGACTGTTCCGGTGAAGACAGCTGAAGCTATTGAG 516
Query 520 AAGATTCTT-ACCCACAATAGCAAAGGAATCAAATTCCAGATT-TTGTCAAACCCTGAGT 577
|||||| || | || || || ||||||||||| || |||||| || || || || ||||
Sbjct 517 AAGATT-TTGATGCATAACAGTAAAGGAATCAAGTTTCAGATTCTT-TCGAATCCGGAGT 574
Query 578 TCCTTGCTGAAGGAACCGCTATTGAAGACCTTTTCATGCCTGACCGTGTCCTCATCGGTG 637
| |||||||||||||| ||||| | || ||||| | ||||||||||| | ||||| |
Sbjct 575 TTCTTGCTGAAGGAACTGCTATCGCTGATCTTTTTAACCCTGACCGTGTTTTGATCGGAG 634
Query 638 GTCGTGAAACACCTGAAGGCTTTGCAGCCGT-CAAAGC-CTTGAAAGACGTTTATTCCCA 695
| || |||||||||||||| || ||| || || | | ||| ||||| |||||| | |
Sbjct 635 GGCGAGAAACACCTGAAGGATTCAAAGCTGTTCAGA-CACTT-AAAGAGGTTTATGCT-A 691
Query 696 AT-GGGTCCCTGAAGAG--AGAATCCTCACCACCAATCTCTGGTCTGCCGAGCTTTCCAA 752
|| |||| ||||||| | ||| || |||| || |||||||||||||| |||||||| ||
Sbjct 692 ATTGGGTTCCTGAAG-GTCAGA-TCATCACAACTAATCTCTGGTCTGCTGAGCTTTCTAA 749
Query 753 GCTT-GCAGCTAACGCCTTCTTAGCCCAGAGAATCTCATCAGTCAATGCAATGTCCGCTC 811
| || || || || || ||||| || ||||| || |||||||||||||| ||||| || |
Sbjct 750 G-TTAGCTGCAAATGCTTTCTTGGCTCAGAGGATTTCATCAGTCAATGCCATGTCTGCAC 808
Query 812 TCTGTGAAGCAACTGGCGCCAATGT--CTCAGAGGTCTCTTACGCTGTGGGCAAAGACTC 869
| |||||| | ||||| || |||| |||| || | ||||||||||| || | || ||
Sbjct 809 TTTGTGAATCCACTGGTGCTGATGTTACTCA-AG-TGTCTTACGCTGTTGGTACTGATTC 866
Query 870 CCGGATTGGTCCCAAGTTCTTGAACTCGAGTGTTGGATTCGGAGGATCTTGTTTCCAGAA 929
| || ||| |||| ||||||||| | ||||||||||||||||| ||||||||||||||
Sbjct 867 AAGAATCGGTTCCAAATTCTTGAACGCTAGTGTTGGATTCGGAGGTTCTTGTTTCCAGAA 926
Query 930 AGATATTCTCAA-CTTAGTCTACATCTG-CGAATGCAACGG-CTTACCCGAAGTTGCTGA 986
|| ||||| || || ||||||||||| | |||||||||| ||| || ||||| || ||
Sbjct 927 GGACATTCTGAATCTC-GTCTACATCTGTC-AATGCAACGGACTT-CCAGAAGTGGCGGA 983
Query 987 GTACTGGAAACAAGTCATCAAGATCAACGACTACCAGAA-AACCCGATTTGTTAACCGCA 1045
|||||||||||||| |||||||||||||| ||||| || |||| | || || ||| | |
Sbjct 984 ATACTGGAAACAAGTGATCAAGATCAACGATTACCAAAAGAACCGG-TTCGTGAACAGAA 1042
Query 1046 TTGTCTCTTCAATGTTCAACACAGTCTCCAACAAAAAGATTGCGGTTCTCGGGTTCGCTT 1105
| || || || ||||||||||| ||||||||||| ||| ||||| |||| || ||||| |
Sbjct 1043 TCGTGTCCTCTATGTTCAACACTGTCTCCAACAAGAAGGTTGCGATTCTTGGATTCGCAT 1102
Query 1106 TCAAGAAAGACACAGGAGACACAAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTCTGT 1165
||||||||||||| || |||||||| || || || ||||||||||| || |||||||| |
Sbjct 1103 TCAAGAAAGACACTGGTGACACAAGGGAAACACCTGCCATTGATGTGTGTAAAGGTCTAT 1162
Query 1166 TAGGTGACAAAGCTC-GTCTCAGCATCTACGACCCACAAGTCACTGAAGACCAGATCCAA 1224
|||| |||||||| | | |||| ||||| || || |||||||| || || ||||| ||
Sbjct 1163 TAGGAGACAAAGCACAGA-TCAGTATCTATGATCCTCAAGTCACAGAGGAACAGATTCAG 1221
Query 1225 AGAGA-CT-TAACCATGAACAAA-TTCGACTGGGACCACCCGCTTCATCTC-CAGCCCAT 1280
||||| || | | ||||| ||| |||||||||||||| || ||||| || ||||| ||
Sbjct 1222 AGAGATCTCT--CGATGAA-AAAGTTCGACTGGGACCATCCTCTTCA-CTTGCAGCCAAT 1277
Query 1281 GAGCCCCACCACTGTGAAACAAGTCTCAGTCG-CTTGGGACGCATAC-ACTGCAACCAAA 1338
||| || ||||| ||||||||||| || | ||||||||||||| | || || |||
Sbjct 1278 GAGTCCAACCACAGTGAAACAAGTGAGTGT-GACTTGGGACGCATATGAA-GCTACAAAA 1335
Query 1339 GACGCCCACG-G-TATCTGCATTTTAACCGAGTGGGACGAGTTCAAGAAACTCGATTTCC 1396
||||| |||| | | | ||| |||| || |||||||||||||| ||| | |||| ||
Sbjct 1336 GACGCACACGCGGT-T-TGCGTTTTGACTGAGTGGGACGAGTTTAAGTCGTTAGATTACC 1393
Query 1397 AGCGGATCTTTGAGAATATGCAGAAACCGGCTTTTGTTTTTGACGGTAGAAATGTGGTCG 1456
|| |||||| || || |||||||||||||||||| | || ||||| ||||| | | |
Sbjct 1394 AGAAGATCTTCGACAACATGCAGAAACCGGCTTTTATCTTCGACGGAAGAAACATTAT-G 1452
Query 1457 AC-GCTGACAAACTCAG-GCAAATTGGGTTT-ATTGTTTACTCCATTGGTAAGCCA-TTG 1512
| | | |||| | || | | ||||| ||| |||||||||||||||||||||||| |||
Sbjct 1453 AATGTTAACAAGTTAAGAG-AGATTGG-TTTCATTGTTTACTCCATTGGTAAGCCACTTG 1510
Query 1513 GACC-AGTGGCTCAAGGACATGCCTGCTCTT-GCCTAAACAACAA 1555
||| | |||||||||||||||||||| ||| | |||| || |||
Sbjct 1511 -ACCCA-TGGCTCAAGGACATGCCTGC-CTTTGTCTAATCA-CAA 1551
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88051755930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5