BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488410
Length=1476
Score E
Sequences producing significant alignments: (Bits) Value
AT5G15650.1 | Symbols: RGP2, ATRGP2 | reversibly glycosylated p... 2409 0.0
AT3G02230.1 | Symbols: RGP1, ATRGP1 | reversibly glycosylated p... 1347 0.0
AT3G08900.1 | Symbols: RGP3, RGP | reversibly glycosylated poly... 660 0.0
> AT5G15650.1 | Symbols: RGP2, ATRGP2 | reversibly glycosylated
polypeptide 2 | chr5:5092157-5094494 FORWARD LENGTH=1530
Length=1530
Score = 2409 bits (1304), Expect = 0.0
Identities = 1425/1482 (96%), Gaps = 13/1482 (1%)
Strand=Plus/Plus
Query 1 AAATCTCACCGACGCGATCCGATCTCATCTCTCTCATTTCGAAACCATGGTTGAGCCGGC 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAAACTCACCGACGCGATCCGATCTCATCTCTCTCATTTCGAAACCATGGTTGAGCCGGC 60
Query 61 GAATACTGTTGGTCTCCCGGTGAATCCGACGCCCTTGCTGAAAGATGAGCTCGATATCGT 120
||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 61 GAATACTGTTGGTCTTCCGGTGAACCCGACTCCGTTGCTGAAAGATGAGCTCGATATCGT 120
Query 121 GATTCCGACTATCAGAAACCTCGATTTCCTCGAGATGTGGAGGCCTTTTCTTCAGCCTTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GATTCCGACTATCAGAAACCTCGATTTCCTCGAGATGTGGAGGCCTTTTCTTCAGCCTTA 180
Query 181 CCATCTGATCATCGTCCAGGACGGAGATCCGTCGAAGAAGATCCATGTCCCTGAAGGTTA 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 181 CCATCTGATCATCGTCCAGGACGGAGATCCATCGAAGAAGATCCATGTCCCTGAAGGTTA 240
Query 241 CGACTACGAGCTCTACAACAGGAACGACATTAACCGGATCCTTGGACCTAAAGCTTCTTG 300
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 241 CGACTACGAGCTCTACAACAGGAACGACATTAACCGAATCCTCGGACCTAAGGCTTCTTG 300
Query 301 TATCTCCTTTAAGGATTCTGCTTGTCGGTGCTTTGGGTACATGGTGTCTAAGAAGAAGTA 360
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 301 TATCTCGTTTAAGGATTCTGCTTGTCGATGCTTTGGGTACATGGTGTCTAAGAAGAAGTA 360
Query 361 TATCTTCACCATTGATGACGATTGCTTCGTTGCCAAGGATCCATCTGGCAAAGCAGTTAA 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 361 TATCTTCACCATTGATGACGATTGCTTCGTTGCCAAGGATCCATCAGGCAAAGCAGTGAA 420
Query 421 TGCTCTTGAGCAACACATCAAGAACCTTCTCTGCCCATCGTCTCCCTTTTTCTTCAACAC 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CGCTCTTGAGCAACACATCAAGAACCTTCTCTGCCCATCGTCTCCCTTTTTCTTCAACAC 480
Query 481 CTTGTATGATCCTTACCGTGAAGGTGCTGATTTCGTCCGTGGATACCCTTTCAGTCTCCG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTTGTATGATCCTTACCGTGAAGGTGCTGATTTCGTCCGTGGATACCCTTTCAGTCTCCG 540
Query 541 TGAAGGTGTTTCCACTGCTGTTTCCCATGGTCTCTGGCTCAACATCCCTGACTACGATGC 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 541 TGAAGGTGTTTCCACTGCTGTTTCCCATGGTCTTTGGCTCAACATCCCTGACTACGATGC 600
Query 601 CCCTACCCAACTCGTGAAGCCTAAGGAGAGGAACACCAGGTATGTGGATGCTGTCATGAC 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CCCGACCCAACTCGTGAAGCCTAAGGAGAGGAACACCAGGTATGTGGATGCTGTCATGAC 660
Query 661 CATCCCAAAGGGAACACTTTTCCCAATGTGTGGTATGAACTTGGCTTTCGACCGTGATTT 720
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 661 CATCCCAAAGGGAACACTTTTCCCAATGTGTGGTATGAACTTGGCTTTTGACCGTGATTT 720
Query 721 GATTGGCCCAGCTATGTACTTTGGTCTCATGGGTGATGGTCAGCCTATTGGTCGCTACGA 780
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 721 GATTGGCCCGGCTATGTACTTTGGTCTCATGGGTGATGGTCAGCCTATTGGTCGTTACGA 780
Query 781 CGATATGTGGGCTGGTTGGTGCATCAAGGTGATCTGTGACCACTTGAGCTTGGGAGTGAA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 CGATATGTGGGCTGGTTGGTGCATCAAGGTGATCTGTGACCACTTGAGCTTGGGAGTGAA 840
Query 841 GACCGGTTTGCCGTATATCTACCACAGCAAAGCGAGCAACCCTTTTGTGAACTTGAAGAA 900
||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 841 GACCGGTTTACCGTATATCTACCACAGCAAAGCGAGCAACCCTTTTGTTAACCTGAAGAA 900
Query 901 GGAATACAAGGGAATCTTCTGGCAGGAGGAGATCATTCCGTTCTTCCAGAACGCAAAGCT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GGAATACAAGGGAATCTTCTGGCAGGAGGAGATCATTCCGTTCTTCCAGAACGCAAAGCT 960
Query 961 ATCGAAAGAAGCAGTAACTGTTCAGCAATGCTACATTGAGCTCTCAAAGATGGTGAAGGA 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 961 ATCGAAAGAAGCAGTAACTGTTCAGCAATGCTACATTGAGCTCTCAAAGATGGTCAAGGA 1020
Query 1021 GAAGTTGAGCTCCTTAGACCCGTACTTTGACAAGCTTGCAGACGCCATGGTTACATGGAT 1080
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1021 GAAGTTGAGCTCCTTAGACCCGTACTTTGACAAGCTTGCAGATGCCATGGTTACATGGAT 1080
Query 1081 TGAAGCTTGGGATGAGCTTAACCCACCAGCAGCCAATGGCAAAGCTTGAG--CAGTATGA 1138
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1081 TGAAGCTTGGGATGAGCTTAACCCACCAGCAGCCAGTGGCAAAGCTTGAGAGCAGTATGA 1140
Query 1139 GCCaaaaaaagaaaaaaaCCACCACAGTTTTGGTTATTTT-AGCTCAAATTATctttact 1197
|||||||| |||||| |||||| ||||||||||||||| ||||||||||||| |||||
Sbjct 1141 GCCAAAAA--GAAAAAG-CCACCAAAGTTTTGGTTATTTTTAGCTCAAATTATCGTTACT 1197
Query 1198 tttaaatttcggattttatgaacctttcttgctttttt-acacatttgagtagtttttCA 1256
|||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1198 TTTAAATTTCTGATTTTACGAACCTTTCTTGCTTTTTTTACACATTTGAGTAGTTTT-CA 1256
Query 1257 TCATCAGTACTTTCTCATTGTCCGATTATGGTTCTTGCATTTGGTTTAAATATCACCGGT 1316
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1257 TCATCAGTACTTTCTCATTGTCCGGTTATGGTTTTTGCATTTGGTTTAAATATCACCGGT 1316
Query 1317 TTATTTATAAACAGTGGTGGATTTGTAGTACTATTTTCTGAGCTTTTTTCTTTGTTTCAT 1376
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 1317 TTATTTATAAACAGTGGTGGATTAGTAGTACTATTTTCTGAGTTTTTTTCTTTGTTTCAT 1376
Query 1377 TAATAAAAAAGTCTTT-CATAAGTGATTGCAATTAGTATTTTTGGTTTCC-ATTAATCAT 1434
||||||||| | |||| |||| ||| ||||||||||| ||||| | || |||||||||
Sbjct 1377 TAATAAAAAGGCCTTTTCATAGGTGTTTGCAATTAGT-TTTTT--TCCCCCATTAATCAT 1433
Query 1435 CCATTATCATAGGTATGTTTTGGCATTAAGTGGTATAAGGAA 1476
| ||||||||||||||||| |||| |||| ||||||||||||
Sbjct 1434 CGATTATCATAGGTATGTTATGGCTTTAAATGGTATAAGGAA 1475
> AT3G02230.1 | Symbols: RGP1, ATRGP1 | reversibly glycosylated
polypeptide 1 | chr3:415393-417547 FORWARD LENGTH=1387
Length=1387
Score = 1347 bits (729), Expect = 0.0
Identities = 958/1069 (90%), Gaps = 14/1069 (1%)
Strand=Plus/Plus
Query 46 CATGGTTGAGCCGGCGAATACTGTTGGTCTCCCGGTGAATCCGAC-GCCC-TTGCTGAAA 103
|||||||||||||||||| || ||||| | |||||||| || || ||| ||| ||||
Sbjct 70 CATGGTTGAGCCGGCGAACACCGTTGGAATTCCGGTGAA-CC-ACATCCCATTGTTGAAG 127
Query 104 GATGAGCTCGATATCGTGATTCCGACTATCAGAAACCTCGATTTCCTCGAGATGTGGAGG 163
|||||||||||||||||||| || || ||| | |||||||||||||| ||||||||||||
Sbjct 128 GATGAGCTCGATATCGTGATCCCCACGATCCGTAACCTCGATTTCCTGGAGATGTGGAGG 187
Query 164 CCTTTTCTTCAGCCTTACCATCTGATCATCGTCCAGGACGGAGATCCGTCGAAGAAGA-T 222
|||||||||||||||||||||||||| |||||||| || |||||||| ||||||| | |
Sbjct 188 CCTTTTCTTCAGCCTTACCATCTGATTATCGTCCAAGATGGAGATCCATCGAAGACCATT 247
Query 223 CCATGTCCCTGAA-GGTTACGACTACGAGCTCTACAACAGGAACGACATTAACCGGATCC 281
| |||||||||| |||| ||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct 248 GC-TGTCCCTGAAGGGTT-CGATTACGAACTCTACAACAGGAACGACATCAACCGTATCC 305
Query 282 TTGGACCTAAAGCTTCTTGTATCTCCTTTAAGGATTCTGCTTGTCGGTGCTTTGGGTACA 341
|||| ||||||||||| || || ||||| ||||| ||||||||||| ||||| || ||||
Sbjct 306 TTGGTCCTAAAGCTTCCTGCATTTCCTTCAAGGACTCTGCTTGTCGTTGCTTCGGCTACA 365
Query 342 TGGTGTCTAAGAAGAAGTATATCTTCACCATTGATGACGATTGCTTCGTTGCCAAGGATC 401
|||| || ||||||||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct 366 TGGTCTCCAAGAAGAAGTACATCTTCACTATTGATGACGATTGCTTCGTTGCTAAGGATC 425
Query 402 CATCTGGCAAAGCAGTTAATGCTCTTGAGCAACACATCAAGAACCTTCTCTGCCCATCGT 461
||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 426 CATCTGGAAAAGCTGTGAACGCTCTTGAGCAACACATCAAGAACCTTCTCTGCCCATCAA 485
Query 462 CTCCCTTTTTCTTCAACACCTTGTATGATCCTTACCGTGAAGGTGCTGATTTCGTCCGTG 521
|||| |||||||||||||||||||| || || ||||||||||||||||| ||||||||||
Sbjct 486 CTCCATTTTTCTTCAACACCTTGTACGACCCATACCGTGAAGGTGCTGACTTCGTCCGTG 545
Query 522 GATACCCTTTCAGTCTCCGTGAAGGTGTTTCCACTGCTGTTTCCCATGGTCTCTGGCTCA 581
|||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct 546 GATACCCTTTCAGTCTCCGTGAGGGTGTTTCCACCGCTGTTTCCCACGGTCTGTGGCTCA 605
Query 582 ACATCCCTGACTACGATGCCCCTACCCAACTCGTGAAGCCTAAGGAGAGGAACACCAGGT 641
|||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct 606 ACATCCCTGATTACGATGCCCCTACCCAACTTGTGAAGCCTAAGGAAAGGAACACAAGGT 665
Query 642 ATGTGGATGCTGTCATGACCATCCCAAAGGGAACACTTTTCCCAATGTGTGGTATGAACT 701
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 666 ATGTGGATGCTGTCATGACCATCCCAAAGGGAACTCTTTTCCCTATGTGTGGTATGAACT 725
Query 702 TGG-CTTTCGACCGTGATTTGATTGGCCCAGCTATGTACTTTGGTCTCATGGGTGATGGT 760
||| |||| |||||||| | ||||| || ||||||||||||||||||||||||||||||
Sbjct 726 TGGCCTTT-GACCGTGAGCTCATTGGTCCGGCTATGTACTTTGGTCTCATGGGTGATGGT 784
Query 761 CAGCCTATTGGTCGCTACGACGATATGTGGGCTGGTTGGTGCATCAAGGTGATCTGTGAC 820
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 785 CAGCCTATTGGTCGCTACGACGATATGTGGGCTGGATGGTGTATCAAGGTGATCTGTGAC 844
Query 821 CACTTGAGCTTGGGAGTGAAGACCGGTTTGCCGTATATCTACCACAGCAAAGCGAGCAAC 880
|| ||| | |||||||||||||| |||||||| || || |||||||||||||| ||||||
Sbjct 845 CATTTGGGATTGGGAGTGAAGACAGGTTTGCCCTACATTTACCACAGCAAAGCCAGCAAC 904
Query 881 CCTTTTGTGAACTTGAAGAAGGAATACAAGGGAATCTTCTGGCAGGAGGAGATCATTCCG 940
|| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 905 CCGTTTGTGAACTTGAAGAAGGAGTACAAGGGAATCTTCTGGCAGGAGGATATCATTCCT 964
Query 941 TTCTTCCAGAACGCAAAGCT-ATCGAAAGAAGCAGTAACTGTTCAGCAATGCTACATTGA 999
|||||||||| ||||||||| | |||||||||| || || ||||| ||||||||||| ||
Sbjct 965 TTCTTCCAGAGCGCAAAGCTCA-CGAAAGAAGCTGTGACAGTTCAACAATGCTACATGGA 1023
Query 1000 GCTCTCAAAGATGGTGAAGGAGAAGTTGAGCTCC-TTAGACCCGTACTTTGACAAGCTTG 1058
||| || ||| |||||||||||||| | ||| || || || || ||||||||||||||||
Sbjct 1024 GCTGTCCAAGTTGGTGAAGGAGAAGCTAAGCCCCATT-GATCCTTACTTTGACAAGCTTG 1082
Query 1059 CAGACGCCATGGTTACATGGATTGAAGCTTGGGATGAGCTTAACCCACC 1107
|||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct 1083 CAGATGCTATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACCCACC 1131
> AT3G08900.1 | Symbols: RGP3, RGP | reversibly glycosylated polypeptide
3 | chr3:2708086-2709714 REVERSE LENGTH=1350
Length=1350
Score = 660 bits (357), Expect = 0.0
Identities = 833/1057 (79%), Gaps = 55/1057 (5%)
Strand=Plus/Plus
Query 73 TCTCCCGGTGAATCCGACGCCCTTGCTGAAAGATGAGCTCGATATCGTGATTCCGACTA- 131
||| || ||||| || ||||| || ||||||||||||| || || ||||| || || |
Sbjct 16 TCTTCC-GTGAAACCCACGCCAATGTTGAAAGATGAGCTAGACATTGTGATACCTACGAT 74
Query 132 TCAGAAACCTCGATTTCCTCGAGATGTGGAGGCCTTTTC-TTCAGCCTTACCATCTGATC 190
|| |||||||||| ||||| ||||||||| | || |||| || ||| || ||| |||||
Sbjct 75 TC-GAAACCTCGACTTCCTTGAGATGTGGCGACC-TTTCTTTGAGCAGTATCATTTGATC 132
Query 191 ATCGTCCAGGACGGAGATCCGTCGAAGAAG--ATC--CATGTCCCTG-AAGGTTACGACT 245
|| || || || || ||||| ||| | ||| ||| ||| | || | | |||| ||||
Sbjct 133 ATTGTTCAAGATGGTGATCCTTCG-A-AAGTCATCAACAT-T-CCAGTAGGGTT-TGACT 187
Query 246 ACGAGCTCTACAACAGGAACGACATTAACCGGATCCTTGGA-CCTAAAGCTTCTTGTATC 304
||||||||||||||||||||||||| || || ||| |||| || || || ||||| ||
Sbjct 188 ACGAGCTCTACAACAGGAACGACATCAATCGAATC-TTGGGTCCCAAGGCCTCTTGCATT 246
Query 305 TCCTTTAAGGATTCTGCTTGTCGGTGCTTTGGGTACATGGTGTCTAAGAAGAAGTATATC 364
||||| ||||| ||||||||||| ||||| || |||||||| || || |||||||| |||
Sbjct 247 TCCTTCAAGGACTCTGCTTGTCGTTGCTTCGGTTACATGGTCTCCAAAAAGAAGTACATC 306
Query 365 TTCACCATTGATGACGATTGCTTCGTTGCCAAGGATCCATCTGGCAAAGCAGTT-AATGC 423
| |||||||||||| |||||||| ||||| ||||||||| | || |||| || | |||||
Sbjct 307 TACACCATTGATGATGATTGCTTTGTTGCAAAGGATCCAACAGGGAAAG-AGATCAATGC 365
Query 424 TCTTGAGCAACACATCAAGAACCT-TC-TCTGCCCATCGTCTCC-CTTTTTCTTCAACAC 480
|||||||| || ||||||||||| | ||| || ||| |||| | ||| ||| |||||
Sbjct 366 GCTTGAGCAGCATATCAAGAACCTCTTATCT-CC-ATCAACTCCGCATTT-CTTTAACAC 422
Query 481 -CTTGTATGATCCTTACCGTGAAGGTGCTGA-TTTCGTCCGTGGATACCCTTTCAGTCTC 538
||| |||||||| ||| | || || || || ||| || |||||||||||||||||| |
Sbjct 423 ACTT-TATGATCCATACAGAGATGGGGCAGACTTT-GTTCGTGGATACCCTTTCAGTATG 480
Query 539 CGTGAAGGTGTT-TCCACTGCTGTTTCCCATGGTCTCTGGCTCAACATCCCTGACTACGA 597
|| ||||||| | || || || || ||||| |||||||||||||| |||||||| ||
Sbjct 481 CGCGAAGGTGCCATA-ACCGCGGTCTCTCATGGCCTCTGGCTCAACATTCCTGACTATGA 539
Query 598 TGC-CCCTACCCAACTCGTGAAGCCTAAGGAGAGGAACACCAGGTATGTGGATGCTGTCA 656
||| ||| || || || ||||| ||| |||| || |||||||||| ||||| ||||
Sbjct 540 TGCTCCC-ACTCAGCTTGTGAAACCTCTTGAGAAAAATTCCAGGTATGTTGATGCAGTCA 598
Query 657 TGACCAT-CCCAAAGGGAACACTTTTCCCAATGTGTGGTATGAAC-TTGGCTTTCGACCG 714
||||||| |||||||| ||| ||||| || ||||||||||||||| ||| |||| |||||
Sbjct 599 TGACCATTCCCAAAGG-AACTCTTTTTCCTATGTGTGGTATGAACCTTG-CTTTTGACCG 656
Query 715 TGATTTGATTGGCCCAGCTATGTACTTTGGTCTCATGGGTGATGGTCAGCCTATTGGTCG 774
||| ||||||| || |||||||||||||| || ||||||||||| ||||| ||||| ||
Sbjct 657 TGAGCTGATTGGTCCGGCTATGTACTTTGGGCTTATGGGTGATGGACAGCCAATTGGACG 716
Query 775 CTACGACGATATGTGGGCTGGTTGGTGCATCAAGGTGATCTGTGACCACTTGAGCTTGGG 834
||| ||||| ||||||||||||||||| |||||||||| ||||||||| || | | |||
Sbjct 717 CTATGACGACATGTGGGCTGGTTGGTGTGTCAAGGTGATATGTGACCACATGGGATGGGG 776
Query 835 AGTGAAGACCGGTTTGCCGTATATCTACCACAGCAAAGCGAGCAACCCTTTTGTGAACTT 894
||||||||| |||||||| || || | ||||||||||| |||||||| || |||||| |
Sbjct 777 AGTGAAGACGGGTTTGCCTTACATATGGCACAGCAAAGCCAGCAACCCATTCGTGAACCT 836
Query 895 GAAGAAGGAATACAAGGGAATCTTCTGGCAGGAGGAGATC-ATTCCGTTCTTCCAGAAC- 952
||| ||||||||||| ||||| || |||||||| ||| | ||||||||||| || | |
Sbjct 837 GAAAAAGGAATACAACGGAATATTTTGGCAGGAAGAGG-CGATTCCGTTCTTTCA-ATCC 894
Query 953 GCAAAGCTATCG-AAAGAA-GCAGTAACTGTTCAGCAATGCTACATTGAGCTCTCAAAGA 1010
| | || || ||||| ||| | | || |||||||||||| | ||||| | |||
Sbjct 895 GTGACTCT-TCCTAAAGAGTGCACTT-CGGTGCAGCAATGCTACCTCGAGCTGGCCAAGC 952
Query 1011 TGGTGA-AGGAGAAG-TTGAGCTCCTTAGACCCGTACTT--TGACAAGCTTGCAGAC-GC 1065
| |||| || |||| ||| | || || || ||||| | ||| |||||| || |
Sbjct 953 TCGTGAGAG-AGAAACTTGGGAAGGTT-GATCCTTACTTCATCACA--CTTGCA-ACTGG 1007
Query 1066 CATGGTTACATGGATTGAAGCTTGGGATGAGCTTAAC 1102
||||| || ||||| ||||||||||| |||||||||
Sbjct 1008 AATGGTCACCTGGATCGAAGCTTGGGAGGAGCTTAAC 1044
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72790790250
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5