BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488470
Length=1332
Score E
Sequences producing significant alignments: (Bits) Value
AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase li... 2128 0.0
AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-li... 1199 0.0
AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-... 1099 0.0
> AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase
like A11 | chr5:5283550-5286293 REVERSE LENGTH=1445
Length=1445
Score = 2128 bits (1152), Expect = 0.0
Identities = 1274/1334 (96%), Gaps = 4/1334 (0%)
Strand=Plus/Plus
Query 1 ATGCAAGAGGACATGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCA 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCAAGAGGACTTGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCA 60
Query 61 ATGTACAATGAACGAGAGGTGTTTCAGTTATCCATTGGTGCTGCTTGCAGACTCATATGG 120
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 61 ATGTACAACGAACGAGAGGTGTTTAAGTTATCCATTGGTGCTGCTTGCAGACTCATATGG 120
Query 121 CCATTGGAGCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCACCATCATGGAA 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CCATTGGATCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCACCATCATGGAA 180
Query 181 ATGGTGAA-CATAGAGTGTGGAAAATGGGCAACCAAAGGCATTAACATAAAATGTGAGAG 239
||||| || || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 181 ATGGT-AAGCACAGAGTGTGGAAAATGGGCAACCAAAGGCATAAACATAAAATGTGAGAG 239
Query 240 GAGAGATAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTA 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GAGAGACAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTA 299
Query 300 CGTCAAAACATGCACCTACATTGCAATCTTCGATGCCGACTTCCAGCCAGAGCCTGACTA 359
|||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct 300 CGTCAAAACATGCACCTACATTGCAATCTTCGATGCTGATTTTCAGCCAGAGCCCGACTA 359
Query 360 CCTAC-AACGGACTGTTCCATTTCTTATCCACAATTCCGAGCTCGCTCTTGTTCAAGCTC 418
||| | |||| ||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 360 CCT-CGAACGCACTGTCCCATTTCTTATCCACAATCCCGAACTCGCTCTTGTTCAAGCTC 418
Query 419 GATGGAAATTTGTGAATGCGAAGAAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCA 478
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 419 GATGGAAATTTGTGAACGCAAAGAAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCA 478
Query 479 ATTACCATTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTCA 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 479 ATTACCATTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTTA 538
Query 539 ATGGGACTGCTGGTGTATGGAGACTGGCGGCAATGGAAGAAGCCGGTGGTTGGAAAGACC 598
|||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 539 ATGGGACTGCGGGTGTATGGAGACTGGCGGCGATGGAAGAAGCTGGTGGTTGGAAAGACC 598
Query 599 GAACCACCGTAGAAGACATGGACTTGGCCGTTCGTGTTGGTCTACATGGCTGGAAATTTG 658
| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 599 GGACCACCGTAGAGGACATGGACTTGGCCGTTCGTGTAGGTCTACACGGCTGGAAATTTG 658
Query 659 TCTTCGTCAATGATGTTGCGGTGAAAAGTGAGCTACCAAGCCAATTTAAGGCTTTCAGGT 718
|||| ||||| |||||| |||||||||||||||||||||||||||||||||| ||||| |
Sbjct 659 TCTTTGTCAACGATGTTTCGGTGAAAAGTGAGCTACCAAGCCAATTTAAGGCATTCAGAT 718
Query 719 TCCAGCAACATCGATGGTCATGCGGTCCAGCTAATCTCTTCAGAAAAATGACTATGGAAA 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TCCAGCAACATCGATGGTCATGCGGTCCAGCTAATCTCTTCAGAAAAATGACTATGGAAA 778
Query 779 TTATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTTTATGTGATCTACAGTTTCTTTT 838
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 779 TTATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTGTATGTGATCTATAGTTTCTTTT 838
Query 839 TCGTAAGGAAGATCATAGTCCATTTCTTCACTTTCTTCTTCTATTGTTTCATTCTTCCTA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TCGTAAGGAAGATCATAGTCCATTTCTTCACTTTCTTCTTCTATTGTTTCATTCTTCCTA 898
Query 899 TGAGCGTATTCTTTCCCGAAGTCAACATTCCGACTTGGTCAACTGTTTACTTTCCTTTTA 958
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 899 CGAGCGTATTCTTTCCCGAAGTCAACATTCCGACTTGGTCAACCGTTTATTTTCCTTTTA 958
Query 959 TGATCACTCTATTCAATGCCATTGCGACACCGCGATCTTTTTACCTCGTGATTTTTTGGG 1018
||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct 959 TGATCACTCTATTCAATGCCATTGCCACACCAAGATCTTTCTACCTCGTGATTTTTTGGG 1018
Query 1019 TCTTATTCGAAAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCATCGGTTTACTTG 1078
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 TCTTATTCGAGAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCATCGGTTTACTTG 1078
Query 1079 AAGGAGGGAGAGTGAACGAATGGGTCGTCACCGAGAAATTAGGAGATGCTCTCGAGACTA 1138
||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 1079 AAGGAGGGAGAGTTAACGAATGGGTCGTCACCGAGAAATTAGGTGATGCGCTTGAGACTA 1138
Query 1139 AGTTACTTCCCCAAGTCAGAAAACCTCGCTATGGGTTTCTCGACAGGATAAACTCAAAGG 1198
|||||||||||||||| |||||||||||| | ||||||||||| |||||||||||||| |
Sbjct 1139 AGTTACTTCCCCAAGTAAGAAAACCTCGCAACGGGTTTCTCGAAAGGATAAACTCAAAAG 1198
Query 1199 AGATGATGGTCGGGATATACATATTGTGTTGTGCCTCCTATAACCTTGTCTTTGGGAAGA 1258
|||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct 1199 AGATGATGGTGGGGATATACATATTGTGCTGTGCATCATATAACCTTGTCTTTGGGAAGA 1258
Query 1259 CATTGTTATATATTTATCTTTACATGCAGGCTCTTGCTTTTATTATTGCCGGAATTGGTT 1318
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAGTGTTATATATCTATCTTTACATGCAGGCTCTTGCTTTTATTATTGCCGGAATTGGTT 1318
Query 1319 TTGTAGGAACTTGA 1332
|| |||||||||||
Sbjct 1319 TTATAGGAACTTGA 1332
> AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-like
A10 | chr1:8516238-8519734 REVERSE LENGTH=1858
Length=1858
Score = 1199 bits (649), Expect = 0.0
Identities = 1119/1346 (83%), Gaps = 32/1346 (2%)
Strand=Plus/Plus
Query 1 ATGCAAGAGGACATGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCA 60
|||||||||||||| ||||| ||| || ||| || |||||||| ||||||||||| |||
Sbjct 328 ATGCAAGAGGACATTGAGCTTGGACATGAAACCTACCCCATGGTCCTTGTCCAAATTCCA 387
Query 61 ATGTACAATGAACGAGAGGTGTTTCAGTTATCCATTGGTGCTGCTTGCAGACTCATATGG 120
|||||||| ||| |||||| |||| ||||| || |||||||| || ||||| ||||||
Sbjct 388 ATGTACAACGAAAAAGAGGTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATATGG 447
Query 121 CCATTGGAGCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCACCATCATGGAA 180
|||||||| || ||||| |||||||||||||||||||||||||||| ||||||| |||
Sbjct 448 CCATTGGACCGCCTAATTGTTCAAGTTTTAGATGATTCCACTGATCAAACCATCAAGGAG 507
Query 181 ATGGTGAACATAGAGTGTGGAAAATGGGCAACCAAAGGCATTAACATAAAATGTGAGAGG 240
||||||||| |||||||| |||||||| || |||||| | || ||||| |||||||||
Sbjct 508 CTGGTGAACACAGAGTGTGCAAAATGGGAAAGCAAAGGTGTAAATATAAAGTGTGAGAGG 567
Query 241 AGAGATAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTAC 300
||||| || ||||||||||| || || |||||||||||| |||| |||| ||| | |||
Sbjct 568 AGAGACAACAGAAATGGCTACAAAGCCGGAGCTCTTAAAGAAGGCATGAAGCACAACTAC 627
Query 301 GTCAAAAC-ATGCACCTACATTG-CAATCTTCGATGCCGACTTCCAGCCAGAGCCTGACT 358
|| || | ||||| || | | | |||||||| || |||||||| || |||||||| |
Sbjct 628 GT-GAAGCTATGCAATTATGTCGTC-ATCTTCGACGCAGACTTCCAACCGGAGCCTGATT 685
Query 359 ACCTACAACGGACTGTTCCATTTCTTATCCACAATTCCGAGCTCGCTCTTGTTCAAGCTC 418
|||| |||| |||| || || || | || || ||||| ||||||| |||||||| |
Sbjct 686 ACCTCCAACACTCTGTCCCCTTCCTCGTTCATAACCCCGAGGTCGCTCTGGTTCAAGCCC 745
Query 419 GATGGAAATTTGTGAATGCGAAGAAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCA 478
|||||| ||| |||| || || |||||||||||||| |||||||| |||||||||||||
Sbjct 746 GATGGAGATTCATGAACGCAAACAAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCA 805
Query 479 ATTACCA-TTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTC 537
| ||||| ||| | ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 806 ACTACCACTTT-ATGGCAGAGCAAGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTC 864
Query 538 AATGGGACTGCTGGTGTATGGAGACTGGCGGCAATGGAAGAAGCCGGTGGTTGGAAAGAC 597
||||| ||||| |||||||||||| |||| || ||||||||||| || || ||| | |||
Sbjct 865 AATGGAACTGCGGGTGTATGGAGAATGGCCGCGATGGAAGAAGCTGGAGGATGGCATGAC 924
Query 598 CGAACCACCGTAGAAGACATGGACTTGGCCGTTCGTGTTGGTCTACAT-GGCTGGAAATT 656
|| || || ||||| |||||||||||||||||||||| |||||| | | |||||||||||
Sbjct 925 CGGACTACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGGTCTTC-TCGGCTGGAAATT 983
Query 657 TGTC-TTCGTCAATGATGTTGCGGTGAAAAGTGAGCTACCAAGCCAA-TTTAAGG-CTTT 713
|||| ||| ||||||| | |||||||||| ||| ||||||| ||| ||||||| ||||
Sbjct 984 TGTCTTTC-TCAATGACCTCACGGTGAAAAGCGAGTTACCAAG-CAAGTTTAAGGCCTTT 1041
Query 714 CAGGTTCCAGCAACATCGATGGTCATGCGGTCCAGCTAATCTCTTCAGAAAAATGACTAT 773
|| |||||||||||||||||||| || |||||||||||||||||||| ||||||| |||
Sbjct 1042 -AGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAATCTCTTCAGGAAAATGATTAT 1100
Query 774 GGAAATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTTTATGTGATCTACAGTTT 833
||| ||||||||||||||||||||||||||||||||||| || ||| || ||||||| ||
Sbjct 1101 GGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAGTTGTATCTGGTCTACAGCTT 1160
Query 834 CTTTTTCGTAAGGAAGATCATAGTCCATTTCTTCACTTTC-TTCTTCTATTGT-TTCATT 891
||||||| || |||||||||||||||| | ||||||||| || ||||| ||| || |||
Sbjct 1161 CTTTTTCTTACGGAAGATCATAGTCCACTGCTTCACTTTTATT-TTCTACTGTGTT-ATT 1218
Query 892 CTTCCTATGAGCGTATTCTTTCCCGAAGTCAACATTCC-GACTTGGTCAACTGTTTACTT 950
||||||| || || ||||||||||||||||||||||| | ||||||||||| ||||| |
Sbjct 1219 CTTCCTACAAGTGTCTTCTTTCCCGAAGTCAACATTCCAG-CTTGGTCAACTTTTTACAT 1277
Query 951 TCCTTTTATGATCACTCTATTCAATGCCATTGCGACACCGCGATCTTTTTACCTCGTGAT 1010
||| | |||||||||||| | || || |||||||||||| |||| || |||||||||||
Sbjct 1278 TCCCTCTATGATCACTCTCTGCATTGTCATTGCGACACCAAGATCATTCTACCTCGTGAT 1337
Query 1011 TTTTTGGGTCTTATTCGAAAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCATCGG 1070
|||||| |||| || ||||| |||||| ||||||| ||||| ||||| |||||||||||
Sbjct 1338 ATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGACAAAAGGAACTTTCATCGG 1397
Query 1071 TTTACTTGAAGGAGGGAGAGTGAACGAATGGGTCGTCACCGAGAAATTAGGAGATGCTCT 1130
|||| ||| || ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1398 CATACTCGAAAGACAAAGAGTGAACGAATGGGTTGTCACTGAGAAATTAGGAGATGCTCT 1457
Query 1131 CGAGACTAAGTTACTTCCCCAAG-TCAGAAAACCTCGCTATGG-GTTTCTCGACAG-GAT 1187
|||||||| ||||||| | | | |||||||| | || |||||| || || | |
Sbjct 1458 TAAGACTAAGCTACTTCCT-AGGATTGGAAAACCTAG-TAACATGTTTCTTGAAAGAG-T 1514
Query 1188 AAACTCAAAGGAGATGATGGTCGGGATATACATATTGTGTTGTGCCTCCTATA-ACCTTG 1246
|||||| |||||||| ||||| ||||||||||| ||||||||||| | |||| || ||
Sbjct 1515 AAACTCCAAGGAGATAATGGTGGGGATATACATCTTGTGTTGTGCTTGCTATGGACTTT- 1573
Query 1247 TCTTTGGGAAGACATTGTTATATATTTATCT-TTACATGCAGGCTCTTGCTTTTATTAT- 1304
|||||||||| |||||||||||| | ||||| || |||||| || |||||||| | ||
Sbjct 1574 TCTTTGGGAACACATTGTTATATCTCTATCTCTT-CATGCAAGCGGTTGCTTTTCTCATA 1632
Query 1305 TGCCGGAATTGGTTTTGTAGGAACTT 1330
| | ||| |||| ||||| || ||||
Sbjct 1633 T-CTGGAGTTGGCTTTGTCGGCACTT 1657
> AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-sugar
transferases superfamily protein | chr4:7792219-7795824
REVERSE LENGTH=1614
Length=1614
Score = 1099 bits (595), Expect = 0.0
Identities = 1109/1352 (82%), Gaps = 56/1352 (4%)
Strand=Plus/Plus
Query 1 ATGCAAGAGGACATGGAGCTCGGAAATCAAAACTT-TCCCATGGTTCTTGTCCAAATCCC 59
||||| ||||| |||||||| || ||||||| || ||| ||||| ||||| ||||||||
Sbjct 295 ATGCAGGAGGATATGGAGCTTGGTCATCAAAA-TTATCCGATGGTCCTTGTTCAAATCCC 353
Query 60 AATGTACAATGAACGAGAGGTGTTTCAGTTATCCATTGGTGCTGCTTGCAGACTCATATG 119
||||||||| ||||||||||| ||| | ||||| || |||||||| |||||||| | |||
Sbjct 354 AATGTACAACGAACGAGAGGTCTTTGAATTATCTATAGGTGCTGCGTGCAGACTAACATG 413
Query 120 GCCATTGGAGCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCA-CCATCATGG 178
||||| ||| || ||||| ||||||||||||||||||||||| ||| ||| | |||||||
Sbjct 414 GCCATCGGACCGTCTAATTGTTCAAGTTTTAGATGATTCCACCGAT-CCAGCAATCATGG 472
Query 179 AAATGGTGAACATAGAGTGTGGAAAATGGGCAACCAAAGGCATTAACATAAAATGTGAGA 238
|| |||||| ||| || ||| |||||||||| | |||| ||| || ||||| | |||||
Sbjct 473 AACTGGTGAGCATGGAATGTACAAAATGGGCATCAAAAGACATAAATATAAATTATGAGA 532
Query 239 GGAGAGATAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTT 298
|| |||| || ||||||||||| ||||||||||||||||| || || |||||||| ||||
Sbjct 533 GGCGAGAGAACAGAAATGGCTACAAGGCTGGAGCTCTTAAGCACGGCATGAGGCACAGTT 592
Query 299 ACGTCAAAACA-TG-CACCTA-CATTGCAATCTTCGATGCCGACTTCCAGCCAGAGCCTG 355
||||| || || || || || | |||| ||||| ||||| || |||||||| ||||| |
Sbjct 593 ACGTC-AAGCAGTGCCA-ATATC-TTGCCATCTTTGATGCTGATTTCCAGCCCGAGCCCG 649
Query 356 ACTACCTACAACG-GACTGTTCCATTTCTTATCCACAATTCC-GAGCTCGCTCTTGTTCA 413
| ||||| ||||| | || | || |||||||||||||| || ||| |||||||||| ||
Sbjct 650 ATTACCTCCAACGCG-CTATCCCCTTTCTTATCCACAA-CCCTGAGGTCGCTCTTGTCCA 707
Query 414 AGCTCGATGGAAATTTGTGAATGCGAAGA-AGTGCTTGATGACTAGGATGCAGGAGATGT 472
||||||||||| |||||| || || || | | ||||| ||||| |||||||| |||||||
Sbjct 708 AGCTCGATGGAGATTTGTAAACGCTAACACA-TGCTTAATGACGAGGATGCAAGAGATGT 766
Query 473 CCCTCAATTACCATTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTG 532
| || || |||||||||| |||||||||| |||| |||||||| |||||||| |||||||
Sbjct 767 CTCTGAACTACCATTTCATGGCAGAGCAACAATCTGGATCCACAAGACATGCTTTCTTTG 826
Query 533 GCTTCAATGGGACTGCTGGTGTATGGAGACTGGCGGCAATGGAAGAAGCCGGTGGTTGGA 592
|||| ||||| ||||| || ||||||||| ||| ||| ||||||||||| || || ||||
Sbjct 827 GCTTTAATGGAACTGCGGGAGTATGGAGAATGGTGGCGATGGAAGAAGCTGGAGGATGGA 886
Query 593 AAGACCGAACCACCGTAGAAGACATGGACTTGGCCGTTCGTGTTGGTCTACAT-GGCTGG 651
| ||||| || || ||||| ||||||||||||||||||||||||||||| | | || |||
Sbjct 887 AGGACCGGACGACGGTAGAGGACATGGACTTGGCCGTTCGTGTTGGTCTTC-TCGGTTGG 945
Query 652 AAATTTGTCTTCGTCAATGATGTTGCGGTGAAAAGTGAGCTACCAAGCCAATTTAAGG-C 710
|||||| ||||||||||||| | | ||| ||||| |||||||||||||||||||||| |
Sbjct 946 AAATTTATCTTCGTCAATGACCTCGAGGTTAAAAGCGAGCTACCAAGCCAATTTAAGGCC 1005
Query 711 TTTCAGGTTCCAGCAACATCGATGGTCATGCGGTCCAGCTAATC-TCTTCAGAAAAATGA 769
|||| | ||||| || ||||| ||||| || |||||||| |||| | || || |||||||
Sbjct 1006 TTTC-GATTCCAACAGCATCGGTGGTCTTGTGGTCCAGCCAATCTTATT-AGGAAAATGA 1063
Query 770 CTATGGAAATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTTTATGTGATCTACA 829
| ||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct 1064 CGATGGAAATTATTCACAATAAGAGAGTGAAGATTTGGAAGAAGTTTTACGTGATCTACA 1123
Query 830 GTTTCTTTTTCGTAAGGAAGATCATAGTCCATTTCTTCACTT-TCTTCTTCTATTGTTTC 888
| ||||||||| || |||||||| ||||||| |||||||||| | ||||| || ||| ||
Sbjct 1124 GCTTCTTTTTCCTACGGAAGATCGTAGTCCACTTCTTCACTTAT-TTCTTTTACTGTGTC 1182
Query 889 ATTCTTCCTATGAGCGTATTCTTTCCCGAAGTCAACATTCCG-ACTTGGTCAACTGTTTA 947
|||||||||| || || ||| |||||||||| || || ||| || ||||||||| | ||
Sbjct 1183 ATTCTTCCTACAAGTGTCTTCCTTCCCGAAGTAAATATACCGAAC-TGGTCAACTATATA 1241
Query 948 CT-TTCCTTTTATGATCACTCTATTCAATGCCATTGCGACACCGCGATCTTTTTACCTCG 1006
| |||||| | | ||||| || || | ||||||||| || || |||| || |||||||
Sbjct 1242 -TGTTCCTTCTGTCATCACCCTCTTGAGTGCCATTGCCACTCCAAGATCATTCTACCTCG 1300
Query 1007 TGATTTTTTGGGTCTTATTCGAAAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCA 1066
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| |
Sbjct 1301 TGATTTTTTGGGTCTTATTCGAAAATGTAATGGCTATGCACCGGACCAAGGGAACTTTGA 1360
Query 1067 TCGGTTTACTTGAAGGAGGGAGAGTGAACGAATGGGTCGTCACCGAGAAATTAGGAGATG 1126
| || ||| |||||||||| ||||| || |||||||| ||||| |||||||||||||||
Sbjct 1361 TTGGCTTATTTGAAGGAGGAAGAGTCAATGAATGGGTTGTCACAGAGAAATTAGGAGATA 1420
Query 1127 CTCTCGAGACTAAGTTACTTCCCCAAGTCAGAAAACCTCGCTATGGGTTTCTCGACAGGA 1186
|||| | |||||| |||||||||| | | | | | | | || | ||| | ||
Sbjct 1421 CTCTTAACACTAAGCTACTTCCCCA-G--A-A-----TGG--ACGACTT-C-CGAAAAGA 1467
Query 1187 -TAAACTCAAAGGAGATGATGGTCGGG-ATATACATATTGTGTTGTGCCTCCTATAACCT 1244
|||| | |||||||||||| | ||| ||||||||||| |||||||| | ||| || |
Sbjct 1468 GTAAATTTGAAGGAGATGATGAT-GGGTATATACATATTATGTTGTGCTTGCTACGACTT 1526
Query 1245 TGTC-TTTGGGAA-GACATTGTTATATATT-TATCT-TTACATGCAGGCT-CTTGCTTTT 1299
|| | ||||| || | |||| |||||| || ||||| || |||||| || || ||||||
Sbjct 1527 TG-CATTTGGAAATG-CATTTTTATAT-TTGTATCTCTT-CATGCAAGCCACT-GCTTTT 1581
Query 1300 ATTAT-TGCCGGAATTGGTTTTGTAGGAACTT 1330
| || | ||||| |||| ||||| |||||||
Sbjct 1582 CTCATCT-CCGGAGTTGGCTTTGTTGGAACTT 1612
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65561911770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5