BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488473
Length=1234
Score E
Sequences producing significant alignments: (Bits) Value
AT5G16230.1 | Symbols: | Plant stearoyl-acyl-carrier-protein d... 1906 0.0
AT3G02610.1 | Symbols: | Plant stearoyl-acyl-carrier-protein d... 1022 0.0
AT3G02620.1 | Symbols: | Plant stearoyl-acyl-carrier-protein d... 918 0.0
AT5G16235.1 | Symbols: | other RNA | chr5:5304494-5305828 REVE... 736 0.0
> AT5G16230.1 | Symbols: | Plant stearoyl-acyl-carrier-protein
desaturase family protein | chr5:5303348-5306068 FORWARD LENGTH=1376
Length=1376
Score = 1906 bits (1032), Expect = 0.0
Identities = 1123/1167 (96%), Gaps = 5/1167 (0%)
Strand=Plus/Plus
Query 30 GCCGGCGGCGGTAACTTCTCCTCGCCGTGGATCTTCTCCTTCTCGTCGTCTTCGAGTTTC 89
|||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 91 GCCGGCGGTGATAACTTCTCCTCGCCGTGGTTCTTCTCCTTCTCGTCGTCTTCGAGTTTC 150
Query 90 ATGTGTTACGACAAACCCTGCTAGGGaa-aaaaaCGAAACATGCAATCAGTACTTTCGAC 148
|||||||| ||||||||||||| |||| |||||||||||||||||||| | |||||||
Sbjct 151 TTGTGTTACCACAAACCCTGCTA-GGAAGAAAAACGAAACATGCAATCA-T--TTTCGAC 206
Query 149 CTATCAAAGAAGTAAATAACCAAATAACACACACAATACCACAAGAGAAGCTTGAGATCT 208
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 207 CTATCAAAGAAGTAAATAACCAATTAACACACACAATACCACAGGAGAAGCTTGAGATCT 266
Query 209 TCAAATCAATGGAGAATTGGGCAGAACAAAAACTACTACCTTATCTCAAACCGGTCGAAG 268
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 267 TCAAATCAATGGAAAATTGGGCAGAACAAAAACTACTACCTTATCTCAAACCGGTAGAAG 326
Query 269 ATTCATGGCAACCACAAGACTTTTTACCTGCGCCAGAGAACGACGACGAATTCTACGACC 328
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 327 ATTCATGGCAACCACAAGACTTCTTACCTGCGCCAGAGAACGACGACGAATTCTACGACC 386
Query 329 GAGTAAAAGAGATCAGAGAACGAACAAAAGAGATACCTGACGATTACTTTGTGGTTCTTG 388
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 387 GAGTAAAAGAGATCAGAGAAAGAACAAAAGAGATACCTGACGATTACTTTGTAGTTCTTG 446
Query 389 TGGGAGATATGATCACAGAAGAAGCACTTCCAACGTATCAAACGACGTTAAACACACTTG 448
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 447 TGGGAGATATGATCACAGAAGAAGCACTTCCAACGTATCAAACGACGTTAAACACACTAG 506
Query 449 ACGGCGTTAAGGATGAAACCGGTGGGAGTTTATCGCCGTGGGCGGTGTGGATTAGAGCAT 508
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 507 ACGGTGTTAAGGATGAAACCGGTGGGAGTTTATCGCCGTGGGCTGTGTGGATTAGAGCCT 566
Query 509 GGACGGCGGAGGAAAACCGTCACGGTGATTTACTCAACAAGTATCTTTATCTAACTGGTC 568
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 567 GGACGGCGGAGGAAAACCGTCACGGTGACTTACTCAACAAGTATCTTTATCTAACTGGTC 626
Query 569 GTGTTGATATGCGACATGTTGAGAAGACTATACAATATCTCATTGGTTCTGGTATGGATT 628
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 627 GTGTTGATATGCGACATGTTGAGAAGACTATACAATATCTTATTGGTTCTGGTATGGATT 686
Query 629 CGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCGAGCAA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 CGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCGAGCAA 746
Query 689 CATTCATCTCTCACGGCAACACGGCGAGGTTAGCCACAACCTACGGCGATGTTACCCTCG 748
||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct 747 CATTCATCTCTCACGGCAACACGGCTAGGCTAGCCACAACATACGGCGATGTTACCCTCG 806
Query 749 CGAAGATCTGCGGCACAATCGCCGCCGACGAAAAGCGTCACGAGACGGCGTACACGAAGA 808
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 807 CGAAGATCTGCGGCACAATCGCTGCCGACGAGAAGCGACACGAGACGGCGTACACGAAGA 866
Query 809 TAGTGGAGAAGCTATTCGAGATCGACCCCGACGGATCGGTTCAGGCGCTGGCGAGTATGA 868
|||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||
Sbjct 867 TAGTGGAGAAGCTATTCGAGATCGACCCTGACGGATCTGTTCAGGCGTTAGCGAGTATGA 926
Query 869 TGAGGAAACGGATCACAATGCCAGCTCATCTTATGCACGACGGAAGAGATAACGATCTGT 928
||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 927 TGAAGAAACGGATCACAATGCCGGCTCATCTTATGCACGACGGAAGAGATAACGATTTGT 986
Query 929 TTGATCATTACGCCGCCGTGGCGCAGCGAATTGGAGTTTATACGGCGACGGATTACGCTG 988
|||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct 987 TTGATCATTACGCCGCCGTGGCGCAGCGGATTGGAGTTTACACGGCGGCGGATTACGCTG 1046
Query 989 GGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGGTTGGGGTTATCAG 1048
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1047 GGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGATTGGGGTTATCAG 1106
Query 1049 GTGAAGGAAGGAGAGCACAGGATTACTTGTGCACCTTGCCGCAGAGGATCAAGAGGTTAG 1108
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1107 GAGAAGGAAGGAGAGCACAGGAGTACTTGTGCACCTTGCCGCAGAGGATCAAGAGGTTAG 1166
Query 1109 AGGAAAGAGCTAATGATAGGGTCAAACTTGGGTCAAAACCTTCTGTTTCGTTTAGCTGGG 1168
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1167 AGGAAAGAGCTAATGATAGGGTCAAACTTGTGTCAAAACCTTCTGTTTCGTTTAGCTGGG 1226
Query 1169 TTTTTGGTAGAGATGTTAAACTATAGA 1195
|||||||||||||||| ||||||||||
Sbjct 1227 TTTTTGGTAGAGATGTGAAACTATAGA 1253
> AT3G02610.1 | Symbols: | Plant stearoyl-acyl-carrier-protein
desaturase family protein | chr3:555626-557723 FORWARD LENGTH=1444
Length=1444
Score = 1022 bits (553), Expect = 0.0
Identities = 962/1157 (83%), Gaps = 37/1157 (3%)
Strand=Plus/Plus
Query 63 TTCTCCTTCTCGTCGTCTTCGAGTTTCATGTGTTACGACAAACCCT-GCTAG-GGaaaaa 120
||||||| |||||| |||||||||||| |||||| | ||||||||| || || | |
Sbjct 144 TTCTCCTCCTCGTCTTCTTCGAGTTTCGTGTGTTGCCACAAACCCTAGCAAGACG-AGTG 202
Query 121 aaCGAAACATG-CAATCAGTACTTTCGACCTATCAAAGAAGTA-AATAACCAAATAACAC 178
|| |||||| | ||| | | |||||||| |||||||||||| | |||||| | || |
Sbjct 203 AA-GAAACA-GACAAGAAAAAGTTTCGACCCATCAAAGAAGTACCA-AACCAAGTGACCC 259
Query 179 ACACAATACCACAAGAGAAGCTTGAGATCTTCAAATCAATGGAGAATTGGGCAGAACAAA 238
|||||||| |||||||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 260 ACACAATAACACAAGAGAAACTGGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAA 319
Query 239 AACT-ACTACCTTATCTCAAACCGGTCGAAGATTCATGGCAACCACAAGACTTTTTACCT 297
| || | || |||| |||||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct 320 A-CTTATTATCTTACCTCAAACCCGTCGAAGCTTCCTGGCAACCACAAGACTTTTTGCCG 378
Query 298 GCG-CCAGA-GAACGACGAC-GAATTCTACGACCGAGTAAAAGAGATCAGAGAACGAACA 354
| ||| | || ||| ||| || |||||||| | |||||||||| | ||||| ||||||
Sbjct 379 GAAACCA-ACGA-CGAAGACCGA-TTCTACGAACAAGTAAAAGAGCTAAGAGATCGAACA 435
Query 355 AAAGAGATACCTGACGATTACTTTGTGGTTCTTGTGGGAGATATGATCACAGAAGAAGCA 414
|||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 436 AAAGAGATCCCTGACGATTACTTTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCT 495
Query 415 CTT-CCAACGTATCAAACGACGTTAAACACACTTGACGGCGTTAAGGATGAAACCGGTGG 473
|| ||||| |||||||| || || ||||| || |||||||| || || || ||||||||
Sbjct 496 -TTACCAACTTATCAAACTACTTTGAACACTCTCGACGGCGTAAAAGACGAGACCGGTGG 554
Query 474 GAGTTTATCGCCGTGGGCGGTGTGGATTAGAGCATGGACGGCGGAGGAAAACCGTCACGG 533
||| || ||||||||||||| ||| || |||||||||||||||||||||| || |||||
Sbjct 555 TAGTCTAACGCCGTGGGCGGTTTGGGTTCGAGCATGGACGGCGGAGGAAAATCGACACGG 614
Query 534 TGATTTACTCAACAAGTATCTTTATCTAA-CTGGTCGTGTTGATATGCGACATGTTGAGA 592
|||||| | || ||||||||||| || | | ||||||||||| |||||||||||||| |
Sbjct 615 TGATTTGTTGAATAAGTATCTTTA-CTTATCAGGTCGTGTTGACATGCGACATGTTGAAA 673
Query 593 AGACTATACAATATCTCATTGGTTCTGGTATGGATTCGAAATTTGAGAACAATCCATACA 652
||||||| |||||||| || || || || ||||| || ||||||||||||||||| || |
Sbjct 674 AGACTATTCAATATCTTATCGGATCCGGCATGGACTCCAAATTTGAGAACAATCCCTATA 733
Query 653 ATGGATTCATCTACACATCATTCCAAGAGCGAGCAACATTCATCTCTCACGGCAACACGG 712
|||| |||||||| || || || |||||| |||| || |||||||| || ||||||||||
Sbjct 734 ATGGCTTCATCTATACTTCTTTTCAAGAGAGAGCCACTTTCATCTCCCATGGCAACACGG 793
Query 713 CGAGGTTAGCCACAACCTACGGCGATGTTACCCTCGCGAAGATCTGCGGCACAATCGCCG 772
||| | ||||||||||||||||||| || ||||| || |||||||| |||||||| |
Sbjct 794 CGAAGCTAGCCACAACCTACGGCGACACAACTCTCGCCAAAATCTGCGGAACAATCGCGG 853
Query 773 CCGACGAAAAGCGTCACGAGACGGCGTACACGAAG-ATAGTGGAGAAGCTATTCGAGATC 831
| || || ||||| || ||||||||||| || | | || || |||||||| |||||||||
Sbjct 854 CGGATGAGAAGCGGCATGAGACGGCGTATAC-ACGGATCGTCGAGAAGCTTTTCGAGATC 912
Query 832 GACCCCGACGG-ATCGGTTCAGGCGCTGGCGAGTATGATGAGGAAACGGATCACAATGCC 890
|| ||||| || | || | || || || ||||||||||||||||| || ||||| |||||
Sbjct 913 GATCCCGATGGTACCG-TACAAGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCC 971
Query 891 AGCTCATCTTATGCACGACGGAAGAGATAACGATCTGTTTGATCATTACGCCGCCGTGGC 950
|||||||| ||||||||||| | || |||||||||| ||||||||||| || |||||
Sbjct 972 GGCTCATCTGATGCACGACGGTCGCGACGACGATCTGTTCGATCATTACGCTGCGGTGGC 1031
Query 951 GCAGCGAATTGGAGTTTATACGGCGACGGATTACGCTGGGATACTTG-AGTTTCTGTTGC 1009
|||| |||| ||||||||||| |||||||||||||| ||||| ||| ||||| ||||||
Sbjct 1032 GCAGAGAATCGGAGTTTATACCGCGACGGATTACGCAGGGATT-TTGGAGTTTTTGTTGC 1090
Query 1010 GGCGGTGGAAGGTGGAGA-GTTTGGGGTTGGGGTTATCAGGTGAAGGAAGGAGAGCACAG 1068
|||||||| ||||||||| ||| ||| | ||| || || || ||||||||||||||||||
Sbjct 1091 GGCGGTGGGAGGTGGAGAAGTTAGGGAT-GGGTTTGTCCGGCGAAGGAAGGAGAGCACAG 1149
Query 1069 GATTA-CTTGTGCACCTTGCCGCAGAGGATCAAGAGGTTAGAGGAAAGAGCTAATGATAG 1127
||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1150 GATTATCT-GTGTACCTTGCCGCAGAGGATCAGGAGGTTAGAGGAAAGAGCTAACGATAG 1208
Query 1128 GGTCAAACTTG-G-----GTCAAAACCTTCTGTTTCGTTTAGCTGGGTTTTTGGTAGAGA 1181
|||||||||| | |||||||||||||||||| || |||||| ||| ||| |||||
Sbjct 1209 AGTCAAACTTGCGTCAAAGTCAAAACCTTCTGTTTCCTTCAGCTGGATTTATGGGAGAGA 1268
Query 1182 TGTTAAACTATAGAAAC 1198
||| ||||||| ||||
Sbjct 1269 AGTTGAACTATA-AAAC 1284
> AT3G02620.1 | Symbols: | Plant stearoyl-acyl-carrier-protein
desaturase family protein | chr3:560256-561880 FORWARD LENGTH=1332
Length=1332
Score = 918 bits (497), Expect = 0.0
Identities = 883/1068 (83%), Gaps = 32/1068 (3%)
Strand=Plus/Plus
Query 142 TTTCGACCTATCAAAGAAGTA-AATAACCAAATAACACACACAATACCACAAGAGAAGCT 200
|||||||| |||||||||||| | |||||| | |||||||||||| |||||||||| ||
Sbjct 154 TTTCGACCCATCAAAGAAGTATCA-AACCAAGTGACACACACAATAACACAAGAGAAACT 212
Query 201 TGAGATCTTCAAATCAATGGAGAATTGGGCAGAACAAAAACT-ACTACCTTATCTCAAAC 259
||||||||||||||||||||||||||||| || |||| || | || |||| |||||||
Sbjct 213 GGAGATCTTCAAATCAATGGAGAATTGGGCCCAAGAAAA-CTTATTATCTTACCTCAAAC 271
Query 260 CGGTCGAAGA-TTCATGGCAACCACAAGACTTTTTACCTGCG-CCAGAGAACGACGAC-G 316
| |||||| | |||||||||||||||||||||||| || | ||| ||| ||| ||| |
Sbjct 272 CCGTCGAA-ACTTCATGGCAACCACAAGACTTTTTGCCAGAAACCAAAGA-CGAAGACCG 329
Query 317 AATTCTACGACCGAGTAAAAGAGATCAGAGAACGAACAAAAGAGATACCTGACGATTACT 376
| |||||||| | ||| |||||| | ||||| |||||||||||||| |||||||||||||
Sbjct 330 A-TTCTACGAACAAGTGAAAGAGCTAAGAGATCGAACAAAAGAGATCCCTGACGATTACT 388
Query 377 TTGTGGTTCTTGTGGGAGATATGATCACAGAAGAAGCACTT-CCAACGTATCAAACGACG 435
|||| |||||||| |||||||||||||| ||||||||| || || || ||||||||| |
Sbjct 389 TTGTAGTTCTTGTCGGAGATATGATCACCGAAGAAGCA-TTACCGACTTATCAAACG--G 445
Query 436 TTA--AACACACTTGACGGCGTTAAGGATGAAACCGGTGGGAGTTTATCGCCGTGGGCGG 493
||| ||||| || ||||| | || || || ||||||| ||| || | ||||||||||
Sbjct 446 TTATGAACACTCTCGACGGAGCCAAAGACGAGACCGGTGTTAGTCTAACACCGTGGGCGG 505
Query 494 TGTGGATTAGAGCATGGACGGCGGAGGAAAACCGTCACGGTGATTTACTCAACAAGTATC 553
| ||| ||||||||||||||||||||||||| || ||||||||||| | || ||||| |
Sbjct 506 TTTGGCTTAGAGCATGGACGGCGGAGGAAAATCGACACGGTGATTTGTTGAATAAGTACC 565
Query 554 TTTATCTAA-CTGGTCGTGTTGATATGCGACATGTTGAGAAGACTATACAATATCTCATT 612
|||| || | | ||||||||||||| |||||||||||| |||||||| |||||||| ||
Sbjct 566 TTTA-CTTATCAGGTCGTGTTGATACGCGACATGTTGAAAAGACTATTCAATATCTTATC 624
Query 613 GGTTCTGGTATGGATTCGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCA 672
|| || || ||||| | |||| |||||||||||| ||||| || | ||||||||| ||
Sbjct 625 GGATCCGGCATGGACACCAAATATGAGAACAATCCCTACAACGGCTACATCTACACTTCT 684
Query 673 TTCCAAGAGCGAGCAACATTCATCTCTCACGGCAACACGGCGAGGTTAGCCACAACCTAC 732
|| |||||| ||||||| || ||||| |||| ||||||||||| | ||||||| || |||
Sbjct 685 TTTCAAGAGAGAGCAACTTTTATCTCCCACGCCAACACGGCGAAGCTAGCCACGACATAC 744
Query 733 GGCGATGTTACCCTCGCGAAGATCTGCGGCACAATCGCCGCCGACGAAAAGCGTCACGAG 792
||||| || ||||| || ||||| || |||||||| || || || ||||| ||||||
Sbjct 745 GGCGACACAACTCTCGCCAAAATCTGTGGAACAATCGCGGCGGATGAGAAGCGGCACGAG 804
Query 793 ACGGCGTACACGAAGATAGTGGAGAAGCTATTCGAGATCGACCCCGACGG-ATCGGTTCA 851
| |||||| ||| ||| || ||||||||||||||||| || ||||| || | || | ||
Sbjct 805 ATGGCGTATACGCGGATCGTCGAGAAGCTATTCGAGATTGATCCCGATGGTACCG-TACA 863
Query 852 GGCGCTGGCGAGTATGATGAGGAAACGGATCACAATGCCAGCTCATCTTATGCACGACGG 911
|| || ||||||||||||||||| || ||||| ||||| ||||| || |||||||||||
Sbjct 864 AGCTCTAGCGAGTATGATGAGGAAGCGAATCACGATGCCGGCTCAGCTGATGCACGACGG 923
Query 912 AAGAGATAACGATCTGTTTGATCATTACGCCGCCGTGGCGCAGCGAATTGGAGTTTATAC 971
| ||| || ||||||| ||||||||||| || ||||||||| |||| ||||| |||||
Sbjct 924 TCGCGATGACAATCTGTTCGATCATTACGCTGCTGTGGCGCAGAGAATCGGAGTGTATAC 983
Query 972 GGCGACGGATTACGCTGGGATACTTG-AGTTTCTGTTGCGGCGGTGGAAGGTGGAGA-GT 1029
|||||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||| ||
Sbjct 984 CGCGACGGATTACGCAGGGATT-TTGGAGTTTTTGTTGCGGCGGTGGGAGGTGGAGAAGT 1042
Query 1030 TTGGGGTTGGGGTTATCAGGTGAAGGAAGGAGAGCACAGGATTA-CTTGTGCACCTTGCC 1088
| ||| | ||| || || |||||||||||||||||||||||||| || ||| ||||||||
Sbjct 1043 TAGGGAT-GGGTTTGTCCGGTGAAGGAAGGAGAGCACAGGATTATCT-GTGTACCTTGCC 1100
Query 1089 GCAGAGGATCAAGAGGTTAGAGGAAAGAGCTAATGATAGGGTCAAACTTGGGTCAAA--- 1145
||||||||||| ||||||||||||||||||| | ||||| ||||||| || ||||||
Sbjct 1101 GCAGAGGATCAGGAGGTTAGAGGAAAGAGCTGACGATAGAGTCAAACGTGCGTCAAAGTC 1160
Query 1146 -A--CCTTCTGTTTCGTTTAGCTGGGTTTTTGGTAGAGATGTTAAACT 1190
| |||||||||||||| |||||| ||| || ||||| ||| ||||
Sbjct 1161 TAAACCTTCTGTTTCGTTCAGCTGGATTTACGGGAGAGAAGTTGAACT 1208
> AT5G16235.1 | Symbols: | other RNA | chr5:5304494-5305828 REVERSE
LENGTH=1236
Length=1236
Score = 736 bits (398), Expect = 0.0
Identities = 436/455 (96%), Gaps = 0/455 (0%)
Strand=Plus/Minus
Query 624 GGATTCGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCG 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 GGATTCGAAATTTGAGAACAATCCATACAATGGATTCATCTACACATCATTCCAAGAGCG 396
Query 684 AGCAACATTCATCTCTCACGGCAACACGGCGAGGTTAGCCACAACCTACGGCGATGTTAC 743
|||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||
Sbjct 395 AGCAACATTCATCTCTCACGGCAACACGGCTAGGCTAGCCACAACATACGGCGATGTTAC 336
Query 744 CCTCGCGAAGATCTGCGGCACAATCGCCGCCGACGAAAAGCGTCACGAGACGGCGTACAC 803
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 335 CCTCGCGAAGATCTGCGGCACAATCGCTGCCGACGAGAAGCGACACGAGACGGCGTACAC 276
Query 804 GAAGATAGTGGAGAAGCTATTCGAGATCGACCCCGACGGATCGGTTCAGGCGCTGGCGAG 863
||||||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||
Sbjct 275 GAAGATAGTGGAGAAGCTATTCGAGATCGACCCTGACGGATCTGTTCAGGCGTTAGCGAG 216
Query 864 TATGATGAGGAAACGGATCACAATGCCAGCTCATCTTATGCACGACGGAAGAGATAACGA 923
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 215 TATGATGAAGAAACGGATCACAATGCCGGCTCATCTTATGCACGACGGAAGAGATAACGA 156
Query 924 TCTGTTTGATCATTACGCCGCCGTGGCGCAGCGAATTGGAGTTTATACGGCGACGGATTA 983
| ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||
Sbjct 155 TTTGTTTGATCATTACGCCGCCGTGGCGCAGCGGATTGGAGTTTACACGGCGGCGGATTA 96
Query 984 CGCTGGGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGGTTGGGGTT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 95 CGCTGGGATACTTGAGTTTCTGTTGCGGCGGTGGAAGGTGGAGAGTTTGGGATTGGGGTT 36
Query 1044 ATCAGGTGAAGGAAGGAGAGCACAGGATTACTTGT 1078
|||||| |||||||||||||||||||| |||||||
Sbjct 35 ATCAGGAGAAGGAAGGAGAGCACAGGAGTACTTGT 1
Score = 647 bits (350), Expect = 0.0
Identities = 370/380 (97%), Gaps = 0/380 (0%)
Strand=Plus/Minus
Query 246 ACCTTATCTCAAACCGGTCGAAGATTCATGGCAACCACAAGACTTTTTACCTGCGCCAGA 305
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 909 ACCTTATCTCAAACCGGTAGAAGATTCATGGCAACCACAAGACTTCTTACCTGCGCCAGA 850
Query 306 GAACGACGACGAATTCTACGACCGAGTAAAAGAGATCAGAGAACGAACAAAAGAGATACC 365
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 849 GAACGACGACGAATTCTACGACCGAGTAAAAGAGATCAGAGAAAGAACAAAAGAGATACC 790
Query 366 TGACGATTACTTTGTGGTTCTTGTGGGAGATATGATCACAGAAGAAGCACTTCCAACGTA 425
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 TGACGATTACTTTGTAGTTCTTGTGGGAGATATGATCACAGAAGAAGCACTTCCAACGTA 730
Query 426 TCAAACGACGTTAAACACACTTGACGGCGTTAAGGATGAAACCGGTGGGAGTTTATCGCC 485
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 729 TCAAACGACGTTAAACACACTAGACGGTGTTAAGGATGAAACCGGTGGGAGTTTATCGCC 670
Query 486 GTGGGCGGTGTGGATTAGAGCATGGACGGCGGAGGAAAACCGTCACGGTGATTTACTCAA 545
|||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 669 GTGGGCTGTGTGGATTAGAGCCTGGACGGCGGAGGAAAACCGTCACGGTGACTTACTCAA 610
Query 546 CAAGTATCTTTATCTAACTGGTCGTGTTGATATGCGACATGTTGAGAAGACTATACAATA 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 CAAGTATCTTTATCTAACTGGTCGTGTTGATATGCGACATGTTGAGAAGACTATACAATA 550
Query 606 TCTCATTGGTTCTGGTATGG 625
||| ||||||||||||||||
Sbjct 549 TCTTATTGGTTCTGGTATGG 530
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60642258360
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5