BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488478
Length=4152
Score E
Sequences producing significant alignments: (Bits) Value
AT5G16280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 4554 0.0
> AT5G16280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5323134-5331685 REVERSE LENGTH=4402
Length=4402
Score = 4554 bits (2466), Expect = 0.0
Identities = 2672/2772 (96%), Gaps = 11/2772 (0%)
Strand=Plus/Plus
Query 1333 ATATCGATAAAGCATGGAAGCACTATGCTGGTGTTCAGGAAATGATGGGACTTGCATATT 1392
||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1428 ATATCGATAAAGCTTGGAAACACTATGCTGGTGTTCAGGAAATGAGGGGACTTGCATATT 1487
Query 1393 TCATCTCAGACCAGTCAAAAAAGGATTCTGAGTATTGCATGGAAAAGGCATTCAGCACTT 1452
|||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1488 TCATCTCAGACCAGCCAAAAAAGGATTCTGAG---TGCATGGAAAATGCATTCAGCACTT 1544
Query 1453 ATATGAAACTTGGGAAGTCTGGCTTCCAAAATGCT-CTGAGATGTGGGCTCTGGTGGGCA 1511
||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct 1545 ATATGAAACTTGGGAAGTCTGGCTTCCAAAATGCTAC-GAGATGTGGGCTTTGGTGGGCA 1603
Query 1512 GAGATGCTAAAGGGTAGAGATCAGCACAAAGAAGCTGCTTCTGTTTACTTCCGCATATGT 1571
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1604 GAGATGCTAAAGGCTAGAGATCAGCACAAAGAAGCTGCTTCGGTTTACTTCCGCATATGT 1663
Query 1572 GGAGAGGAACCCTTGCACGCTGCAGTCATGTTGGAGCAAGCTTCTTACTGTTTCGTGTTA 1631
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1664 GGAGAGGAACCCTTGCACGCTGCAGTCATGTTGGAGCAAGCTTCTTACTGTTTCATGTTA 1723
Query 1632 ACTAAGCCAGCGATGCTACACAAGTATGGATTTCATCTAGTTCTCTCAGGAGAACACTAT 1691
|| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1724 ACCAAGCCAGCGATGTTACACAAGTATGGATTTCATCTAGTTCTCTCAGGAGACCACTAT 1783
Query 1692 AAAAACTGTGATCAGGTTAACCATGCAATTCGTACATACAAAAGTGCAATCTCTGTTTAT 1751
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 AAAAACTGTAATCAGGTTAACCATGCAATTCGTACATACAAAAGTGCAATCTCTGTTTAT 1843
Query 1752 AAATCAACTACATGGAGCCATATCAAAGATCATATATATTTTCATATTGGACAGTGGTAT 1811
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1844 AAATCAACTACATGGAGCCATATCAAAGATCATTTATATTTTCATATTGGACAGTGGTAT 1903
Query 1812 GCAATTGTTGGGATGCATGATGTTGCAGTTAGAAACATGCTCAAAGTACTGGACTGTGGC 1871
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1904 GCAATTGTTGGGATGCATGATGTTGCAGTTAGAAACATGCTCAAAGTATTGGACTGTGGC 1963
Query 1872 TACCAATCCAAGGCAACCCAAGAAATTTTTCTCAGGGACTTTTTCGACATTGTTAAGAAA 1931
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1964 TACCAATCCAAGGCAACCCAAGAGATTTTTCTCAGGGACTTTTTCGACATTGTTAAGAAA 2023
Query 1932 ACTGGAATGAAGCATGAGGTGGTGGGACTTCAACTACCAGTTATTAATATGTCGTCTCTT 1991
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2024 ACTGGAATGAAGCATGAGGTGGTGGGACTTCAACTACCAATTCTTAATATGTCGTCTCTT 2083
Query 1992 CGAGTTATATATGAAGACCATCGCACTTATGCATCTCAAGCTTCTGCTCTTGTAGAGGAG 2051
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2084 CAAGTTATATATGAAGACCATCGCACTTATGCATCTCAAGCTTCTGCTCTTGTAGAAGAG 2143
Query 2052 AGCATCTGGCAATCACTGGAGGATGATATCATTCCATCATTAAATTCTGGCAAGTCAAAC 2111
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2144 AGCATCTGGCAATCACTGGAGGATGATATCATCCCATCATTAAATTCTGGCAAGTCAAAC 2203
Query 2112 TGGCTGGAGTTACAGTCAAAGCTTCTGCCAAAGAAATACAAGGAATCAAATGTTTGTGTC 2171
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2204 TGGCTGGAATTACAGTCAAAGCTTCTGCCAAAGAAATACAAGGAATCAAATGTTTGTGTC 2263
Query 2172 TCTGGAGAGTCGGTGAAAGTGGATCTGGAGTTTAAGAATCCGTTGCTAATTTCTACTTCC 2231
||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||
Sbjct 2264 GCTGGAGAGTCGGTGAAATTGGATCTGGAGTTTAGGAATCCATTGCTAATCTCTACTTCC 2323
Query 2232 ATAACAAGTGTGTCTCTAATCTGTGAACTTACCACAAATTCTGATGACCTAAAATTAGTA 2291
||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||
Sbjct 2324 ATAACAAGTGTGTCTCTTATCTGTGAACTTACCGCAAATTCTGACGACCTAAAATTAGTA 2383
Query 2292 GATAATGAGCCAAGTAGCTCAAGCTTGGGTCCTGCGATTTCCACAGAACATAATCAGGTT 2351
||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 2384 GATAATGAGCCAAGTGGCTCAAGCTTGAGTCCTGAGATTTCCACAGAACATAATCAGGTT 2443
Query 2352 ACAACCTCCGGTTTTTCTTCTTTCACTTTGTCTGAAGTGGACTTCACATTAGGTGGAGGC 2411
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2444 ACAACCTCTGGTTTTTCTTCTTTCACTTTGTCTGAAGTGGACTTCACATTAGGTGGAGGC 2503
Query 2412 GAGAAAAATTTGGTGAGACTCACGGTTACCCCCACTGAAGAAGGTATCCTCAAAATTGTC 2471
|||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 2504 GAGAAAAAATTGGTGAGACTCACTGTTACCCCCAGTGAAGAAGGTATCCTCAAAATTGTC 2563
Query 2472 GGTGTAAGGTGGGAGTTGTCTGGTTCCATCGTAGGTGTGCATTACTTCCAATCTGTGCCT 2531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2564 GGTGTAAGGTGGGAGTTGTCTGGTTCCATCGTAGGTGTGCATTACTTCCAATCTGTGTCT 2623
Query 2532 GTAAAGGCAAAAACTGCGAAAGGAAGAAGGAAAAACAAACTTACACCCACTGATGCCTTG 2591
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2624 GTCAAGGCAAAAACTGCGAGAGGAAGAAGGAAAAACAAACTTACACCCACTGATGCCTTG 2683
Query 2592 AAATTTTTAGTCATCAAGAGTCTACCCAGGCTTGAGGGTTCAATTGATCATCTGCCTGAG 2651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2684 AAATTTTTAGTCATCAAGAGTCTACCCAGGCTTGAGGGTTCAATTGATCATCTGCCTGAG 2743
Query 2652 AAATTGTATGCTGGAGATCTACGTTATCTTGTTTTAGAGTTAAGAAATAAGTCAGAATCC 2711
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2744 AAATTGTATGCTGGAGATTTACGTTATCTTGTTTTAGAGTTAAGAAATAAGTCAGAATCC 2803
Query 2712 CCAATAAAGAATCTTAAAATGAAGATTAGCCATCCAAGATTTGTAAGTCCTGGAAATCAT 2771
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2804 CCAACAAAGAATCTTAAAATGAAGATTAGCCATCCAAGATTTGTAAGTCCTGGAAATCAT 2863
Query 2772 GAAGAAGAGCTGACAACCGAATTTCCAGATTGCTTAAAGAAGGGAGATGACCAAAATATT 2831
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 2864 GAAGAAGAGCTGACAACCGAATTTCCAGATTGCTTAAAGAAGGGCGATGAACATAATATT 2923
Query 2832 GTTCAGCATGAAACAAATAGAACAAGTAGTGTATTTGCATTTCCAAAGGATGTATCACTG 2891
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2924 GTTCAGCGTGAAAGTAATAGAACAAGTAGTGTATTTGCATTTCCAAAGGATGTATCACTG 2983
Query 2892 CAAGGAGACAGATCATTAAGGTGGCCTCTTTGGCTTCGAGCTGCCATCCCAGGGACGATA 2951
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2984 CAAGGAGACAGATCATTAAGGTGGCCTCTTTGGCTTCGAGCTGCCATCCCAGGAACAATA 3043
Query 2952 TCTTTGTATTTTACAATATACTATGAGATGGAAAATGTATCAAGCATCATGAAATACCGC 3011
|||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 3044 TCTTTGTATTTTACGATATACTATGAAATGGAAAATGTATCAAGCAT---GAAATACCGC 3100
Query 3012 ACCCTAAGGATGCATTATAATTTGCAGGTTTTACCGTCTCTACAGACCTCATTCGAAA-T 3070
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct 3101 ACCCTAAGGATGCATTATAATTTGCAGGTTTTACCGTCTCTACAGACCTCGTTC-AAAGT 3159
Query 3071 CACCCCATCTCCATCAAGATTGCAAGAATTTCTTGTGCGTATGGATATCGTGAACCGTGC 3130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3160 CACCCCATCTCCATCAAGATTGCAAGAATTTCTTGTGCGTATGGATATCGTGAACCGTGC 3219
Query 3131 GAATTCAGGTTGTTTCCAAATTCACCAGTTGTCGACAGTTGGGTGCCGGTGGGGTATCTC 3190
||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3220 GAAGTCAGATTGTTTCCAAATTCACCAGTTGTCAACAGTTGGGTGCCGGTGGGGTATCTC 3279
Query 3191 GTTGCTTCAGCCTGTTGATACAATCTTACCTTCCAAGTCTCTACTCGCTGGGCAAGCTTT 3250
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 3280 ATTGCTTCAGCCTGTTGATACAATCTTACCTTCCAAATTTCTACTCGCTGGGCAAGCTTT 3339
Query 3251 ATCTTGTTTCTTCATGATAAAGGATTGCAGAAAATCCGGGACTGATGACGAGGAAACCAT 3310
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3340 ATCTTGTTTCTTCATGATAAAGGATTGCAGAAAATCCGGGACTGAAGACGAGGAAACCAC 3399
Query 3311 GTCCCTTCCTCCCAGCCAAACCGACGTAAAATTGTTTACTCAGGATGACGATGAAAAGCT 3370
||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct 3400 GTCCCTTCCTCCCAGCCAAACTGATGTAAAATTGTATACTCAGGATGACGATGAAAAGCT 3459
Query 3371 TTTCGATATCGTTAGCTCACCTTTAGCAAGCTTCCATGATAGTGAAAGGTCATGTCAGGG 3430
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3460 TTTCGATATCGTTAGCTCACCTTTAGCAAGCTTCCATGAAAGTGAAAGGTCATGTCAGGG 3519
Query 3431 ACCCTCGGTTCAGGTAAGTCCAAATACCGTTGACTTCATTCTAATCTCTCGCCTGGCAAA 3490
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 3520 ACCCTCGGTTCAGGTAAGTCCAAATACTGTTGACTTCATCCTAATCTCTCGCCTGGCGAA 3579
Query 3491 AAGCAGCAGTCCATCAGCAGTTCCCGATTTACCAAAGATTTTGACTCACCATTCATGTCA 3550
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3580 AAGCAGCAGTCCATCAGCAGTTCCCGATTTACCAAAGATTTTGTCTCACCATTCATGTCA 3639
Query 3551 TAACAGTATCAGAAGCTCGAGTCCGCTCTCGTGGTCACTAGACGGTCCCCAAACCATACA 3610
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 3640 TAACAGTATCAGAAGCTCGAGCCCGATCTCGTGGTCACTAGACGGTCCCCAAACCATACA 3699
Query 3611 CCACGACTTTTTGACCTCCTTGTGTGAAATAAAACTAAAGATGGTAATCAGAAACACATC 3670
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3700 CCACGACTTTTCGACCTCCTTGTGTGAAATAAAACTAAAGATGGTAATCAGAAACACATC 3759
Query 3671 TGATGGATTAACATATGTGACCATCAACACGAATGATTGTCTACCAGACGCAGCAGCACC 3730
||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 3760 TGATGGAATATCATCTGTGACCATCAACACGAATGATTTTCTACCAGACGCAGCAGCAAC 3819
Query 3731 TACTTCTTCCTCTGGAAACCAATCCGGGTGGCGCTACGTGCCAACCGTAACAGAGGAAAT 3790
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 3820 TACTTCTTCCTCTGGAAACCAATCCGGGTGGCGCTACGTGCCAACCATCACAGAGGAAAT 3879
Query 3791 GAAACTAACTTCAGATGTCATGGGAAGCCGCCTGGGAAAACCGTCATCTTCCATGGAAAG 3850
|||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||
Sbjct 3880 GAAACTAACTTCAGATGTGATGGGAAGCCGTCTGGGAAAACCGCCATCTTCCATGGAAAG 3939
Query 3851 CTCACCTCCATTCATATGGTCAGGTTTAAGTTCAACAAAGGTCCAAATCCAGCCATTATC 3910
||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 3940 CTCACCTCCTTTCATATGGTCAGGTTTAAGTTCCACAAAGATCCAAATCCAGCCATTATC 3999
Query 3911 CACAACCGAAATCCCGCTGCAGATATCAGTTTTCTCTCCAGGTATCTACGATCTCTCTTC 3970
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4000 CACAACCGAAATACCGCTGCAGATATCAGTTTTCTCTCCAGGTATCTACGATCTGTCTTC 4059
Query 3971 ATATAAACTTAACTGGGAGCTATCTGAGCATGAAAGTGCAACATCATCAGGGACATGCCA 4030
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4060 ATATGAACTTAACTGGGAGCTATCTGAGCATGAAAGTGCAACATCATCAGGGACATGCCA 4119
Query 4031 AGGTTATCCTTATTACCTTACTGTTCTTCAGTCTGAGTGAGCTTTTTATAGTTCTCTCTA 4090
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 4120 AGGTTATCCTTATTACCTTACTGTTCTTCAGTCTGAGTGAGCTTTT-ATAGTTCTCTCTA 4178
Query 4091 ATGGTTGGATGT 4102
|||||||| |||
Sbjct 4179 ATGGTTGGGTGT 4190
Score = 2015 bits (1091), Expect = 0.0
Identities = 1233/1301 (95%), Gaps = 11/1301 (1%)
Strand=Plus/Plus
Query 1 CTCCAAATCTCCAATCGAACCTTTGCCTACACCTCTCCCTCTACGTCGATCTGGATCCCG 60
||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct 21 CTCCAAATCTCCAATCGAA-CTTTGCCTACATCTCTCCCTCTACGTCGATCTCGATCCCG 79
Query 61 ATCACGATCATCCAATCATTCTCCGGTGAATTACGCCGTACTCATTGCTTTCTCTGTTCT 120
|| |||||||||| ||||||||||||| || ||||||||||| | ||||||||| ||||
Sbjct 80 ATTACGATCATCCGATCATTCTCCGGTTAA-TACGCCGTACTGACTGCTTTCTCCATTCT 138
Query 121 ACGTACTCCATCATTTACCGATATCTTTTTTCCTACCTACATCAAGTCCGGCAGCTGCCG 180
|| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 139 ACATACTCCATCATTTACCGATATCTTCATTCCTACCTACATCAAGTCCGGCAGCTGCCG 198
Query 181 ACGACGGCGTCGTAGCTCCGATTGGCTT-AAAA-GTAGAGATCTAGGTTACTGAATCGCA 238
|||||||||||||||||||||||||||| |||| || ||||||||||||| |||||||||
Sbjct 199 ACGACGGCGTCGTAGCTCCGATTGGCTTAAAAAGGTGGAGATCTAGGTTATTGAATCGCA 258
Query 239 CCGCCTCCAAAATCTATCAGACCTGAAATCGGATTAGATACACAGTGAAGAGATTTGAGA 298
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 259 CCGCCTCCAAAATCTATCCGACCTGAAATCGGATTAGATACACAGTGAAGAGGTTTGAGA 318
Query 299 GACTAGTTAGGCGAAAGGAAGAATGGTGGAGCCGGTGAACTCTTCGTTTGGGAAAATGCT 358
||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 319 GACTAGTTAAGCGAACGGAAGAATGGTGGAGCCGGTGAACTCTTCGCTTGGGAAAATGCT 378
Query 359 ATTGGAGGAAGTTAGTCCAGTGGTCATGGTTCTCTGTACGCCTCTTGTTGAAGAGACTTT 418
|||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 379 ATTGGAGGAAATTAGTCCAGTGGTCATGGTTCTATGTACGCCTCTTGTTGAAGATACTTT 438
Query 419 CCTCAAGAATGGTC-TATCCTTTGTGGAAACGCTCAAGCCATTCTGCAACTTTAGTAATA 477
||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 439 CCTCAGGAATGG-CTTATCCTTTGTGGAAACGCTCAAGCCATTCTGCAACTTTAGTAACA 497
Query 478 TCGATGTGCCTGTTCGGACATCAAGCGATCAGCTATATCGTCTAAAGAAGTTTACGTTGA 537
|||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| || |
Sbjct 498 TCGATGTGCCTGTTCGGACATCGAGCGATCAGCTGTATCGGCTAAAGAAGTTTACATTAA 557
Query 538 GATTGTTTTATGCCTCCGATATCAGGCAACCAAACGTAGAGGTTGCAAAGCAACGGCTGG 597
|||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |
Sbjct 558 GATTGTTTTATGCCTCCGATATAAAGCAACCAAACGTAGAGGTTGCTAAGCAACGGCTAG 617
Query 598 AACATGTTATTACTCAAGCTGGGGAGAAGGATTTTCATGATTTGAACTCTGACCCTCCTC 657
||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 618 AACGTGTTATTACTCAAGCTGGGGAGAAGGATTTTCAGGATTTGAAATCTGACCCTCCTC 677
Query 658 AAATTACTGATATACTCTCTAATCCAGAGTCTGAAATTGCACCCTCATGGTTTCAGTATT 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 678 AAATTACTGATATACTCTCTAATCCAGAGTCTGAAATTGCACCCTCATGGTTTCGGTATT 737
Query 718 ACAATAAAGAACTTATACGTACATTGTCGTTTTCAGACCACGAAGCTTTCGATCATCCTG 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 ACAATAAAGAACTTATACGTACATTGTCGTTTTCAGACCACGAAGCTTTCGATCATCCTG 797
Query 778 TGGCTTGTCTCTTGGTCGTTTCATCAAAAGACGAAGAACCTATAAATAAATTTGTAGATC 837
|||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 798 TGGCATGTCTATTGGTCGTTTCATCAAAAGATGAAGAACCTATAAAAAAATTTGTAGATC 857
Query 838 TTTTCAACTCCAATAGATTACCTACTGATGGTACAATGGACCCAAATATTTTGAAGCATT 897
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 858 TTTTCAACTCCAATAGATTACCTACTGATGGTACAATGGACCCAAACATTTTGAAGCATT 917
Query 898 ACTTGTTGGTGCATGACAATCAAGATGCAACAACAGAGAGAACGTCTAAAGTCCTTTCAG 957
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 918 ACTTGTTGGTGCATGACAATCAAGATGCAACAACAGAGAGAACGTCTAAAGTTCTGTCAG 977
Query 958 AGATGAGAAGTCAATTTGGAAATAATGAATGCAACTTACTTTGCACTAATTCATCTAAAG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 AGATGAGAAGTCAATTTGGAAATAATGAATGCAACTTACTTTGCACTAATTCATCTAAAG 1037
Query 1018 AGGGGAACGTGGAACATCAGGCTAATCCCTGGGCTTCATTTAAATCAAGTGTTTCGGCCG 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038 AGGGGAACGTGGAACATCAGGCTAATCCCTGGGCTTCATTTAAATCAAGTGTTTCGGCCG 1097
Query 1078 ACAAACTTGGATGTGCCCTCACTGGTGACGATATTGTGGAGCAGATCAAAGATCTGATGC 1137
|||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||
Sbjct 1098 ACAAACTTGGATGTGCTCTCACTGGTGATGATATTGTGGAG-A--TCAAAGATCTGATGC 1154
Query 1138 AAGAGTTTGCTTCCAGGCATATTATTCCTTACATGGAGCAGAAAGTTCGAGAACTTAATC 1197
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1155 AAGAGTTTGCTTCAAGGCATATAATTCCTTACATGGAGCAGAAAGTTCGAGAACTTAATC 1214
Query 1198 AACAGATTTCTGCAACAAGGAAAGGTCTTAGAAACCAGATT-AAAAACTTATGGTGGAGA 1256
|||||||||||||||||||||||||||||| ||| || ||| |||||||| | |||||||
Sbjct 1215 AACAGATTTCTGCAACAAGGAAAGGTCTTAAAAATCA-ATTTAAAAACTTTTTGTGGAGA 1273
Query 1257 AAAGGAAAAGGCGATGGTCCGGATGTGACCAAAGGTTCTAT 1297
|||||||||| |||| |||||||| ||||||||||||||
Sbjct 1274 AAAGGAAAAGACGATAATCCGGATGCCACCAAAGGTTCTAT 1314
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 206938639875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5