BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488502 Length=1014 Score E Sequences producing significant alignments: (Bits) Value AT5G16480.1 | Symbols: | Phosphotyrosine protein phosphatases ... 1221 0.0 AT3G02800.1 | Symbols: | Tyrosine phosphatase family protein |... 483 2e-135 > AT5G16480.1 | Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr5:5381113-5382897 REVERSE LENGTH=1115 Length=1115 Score = 1221 bits (661), Expect = 0.0 Identities = 947/1072 (88%), Gaps = 72/1072 (7%) Strand=Plus/Plus Query 1 AtttttttCCAAATCCGCAGAAATCTC-T-ACCAAAACACTCCTAAATCTTCGTCATC-T 57 ||||||||||||||||| | ||||||| | || |||| |||||| ||||||||||||| | Sbjct 17 ATTTTTTTCCAAATCCGAAAAAATCTCTTAACAAAAAAACTCCTTAATCTTCGTCATCTT 76 Query 58 TTTGTCTCTTTATaaaaaagattaaataaaaaaaaaaaaCCACTTGATGATTATCCCATA 117 ||||||||||| | ||||| | | ||| ||| |||||||||||||||||||| Sbjct 77 TTTGTCTCTTT-TTAAAAA-A-T-AAT------TAAACCCCACTTGATGATTATCCCATT 126 Query 118 AACCATATAAA--------------TTTTTGTTCAATC-AAtctctctctctctATTGAT 162 || ||| |||| ||||||||||| | ||||||| ||||||| | ||| Sbjct 127 AATCATTTAAAGGTTTTTTTTTTTCTTTTTGTTCAA-CGAATCTCTATCTCTCTCTAGAT 185 Query 163 TTTGGGGATTTTG--CTCTCT--CT-T-TG--------T--TGCTCGTATCTTTCTGTTT 206 ||||||||||||| |||||| || | || | |||||||| |||||||| | Sbjct 186 TTTGGGGATTTTGCTCTCTCTCCCTCTCTGTCTCTCTTTGGTGCTCGTAGCTTTCTGTCT 245 Query 207 CCCAATAGAGAGACGGAGGGAGAGAGAAA--TTGATGGGCTTAATCGT-G--GATGATAG 261 |||||| |||||| ||||||||| ||||| | |||||||||||| || | ||||||| Sbjct 246 CCCAATTGAGAGAAGGAGGGAGATAGAAACGTCGATGGGCTTAATTGTGGATGATGATAA 305 Query 262 CGACGGAGAAGTTTTGATCCCGCCGCCGAATTTTTCGATGGTAGAAGACGGGATTTATCG 321 ||| |||||||||||||| ||||||||||||||||| ||||||||||| | ||||| || Sbjct 306 CGATGGAGAAGTTTTGATTCCGCCGCCGAATTTTTCAATGGTAGAAGATGAAATTTACCG 365 Query 322 ATCTGGGTTTCCTCAGCTGGAGAATTTCGGATTCTTATCAACCCTAAATCTTCGATCCAT 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 ATCTGGGTTTCCTGAGCTGGAGAATTTCGGATTCTTATCAACCCTAAATCTTCGATCCAT 425 Query 382 CATTTATCTGTGTCCTGAACCATACCCTGAGGACAATCTCAAGTCTCTT-CAATCCAACA 440 |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| Sbjct 426 CATTTATCTGTGTCCTGAGCCATACCCTGAGGACAATCTCAAGTCTCTTGC-ATCCAACA 484 Query 441 ACATTAAGCTTTTTCAGTTCGGGATTGAAGGCAAAACGGATCCTCCAACTCCTATGCCAA 500 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 485 ACATTAAGCTTTTCCAGTTCGGGATTGAAGGCAAAACGGATCCTCCAACTCCTATGCCAA 544 Query 501 AGGATACAGTGTTGAGTGCTCTTAGAGTACTAGTTGATGTTCGAAATCATCCAATTCTCA 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 545 AGGATACAGTGTTGAGTGCTCTTAGAGTACTAGTTGATGTTCGAAATCATCCAATTCTTA 604 Query 561 TCCACTGTAAGCGCGGGAAGCATAGGACAGGTTGTCTTGTGGGATGCTTGAGGAAAGTGC 620 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 605 TCCACTGTAAGCGCGGAAAGCATAGGACAGGTTGTCTTGTGGGATGCTTGAGGAAAGTGC 664 Query 621 AAAACTGGTGTTTGTCATCGGTTCTTGAGGAATATCAAAAGTGTGCGGGTTTGAAATGGA 680 | |||||||| |||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct 665 AGAACTGGTGCTTGTCATCGGTTCTCGAGGAATACCAGAAGTGTGCGGGTTTGAAATGGA 724 Query 681 GACAAAGAGATTTAAGGTTCATAGAGGATTTTGATGTGCTCAGATTGAAGCAATGTCTAT 740 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 725 GACAAAGAGATTTAAGGTTCATTGAGGATTTCGATGTGCTCAGATTGAAGCAATGTCTAT 784 Query 741 ACAGCATTATCTATCAGTACAATGGGTATGGTCTCAAGAGAAGAAAGTTGCTGTATCAAG 800 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 785 ACAGCATCATATATCAGTACAATGGGTATGGTCTCAAGAGAAGAAAGTTGCTGTATCAAG 844 Query 801 AAGAGAATGTTGTTCAAGAACAGCAAAAACCTCAAGCCACCAAAGGGTGAAGAAAGAGAT 860 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 845 AAGAGAATGTTGTTCAAGAACAGCAAAAACCTCAAGCCACCAAAGGATAAAGAAAGAGAT 904 Query 861 TTGAAATCGGAtttttttttGTTTCTTTACATTTTGTCGTGTTGATGATGATGATTCTTT 920 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 905 TTGAAATCGGATTTTTTTTTGTTTCTTTACATTTTGTCGTGATGATGATGATGATTTTTT 964 Query 921 TGAGAATAGGATAG------AAAA---T--AGA-----G-G-ATTTGATTTGGTCTGTCT 962 |||||||||||||| |||| | ||| | | |||||||||||||| ||| Sbjct 965 TGAGAATAGGATAGTTCTTTAAAAAGCTTGAGAAAACAGAGGATTTGATTTGGTCTCTCT 1024 Query 963 ATCttttttctttttACAGTTAGAGAAATTTACAGATTGATTCTTAATTGTT 1014 | | |||| |||| || |||||||||||||||||||||||||||||||||| Sbjct 1025 CTATCTTTT-TTTT-ACGGTTAGAGAAATTTACAGATTGATTCTTAATTGTT 1074 > AT3G02800.1 | Symbols: | Tyrosine phosphatase family protein | chr3:606471-607886 REVERSE LENGTH=961 Length=961 Score = 483 bits (261), Expect = 2e-135 Identities = 471/570 (83%), Gaps = 24/570 (4%) Strand=Plus/Plus Query 253 GGATGAT-AGCGACGGAGAAGTTTTGATC-CCGCCGCCGAATTTTTCGATGGTAGAAGAC 310 ||||||| | | |||| || ||||| | | |||||| ||||||| |||||||| ||||| Sbjct 203 GGATGATCA-CAACGGTGATGTTTT-AGCGCCGCCGTCGAATTTCTCGATGGTTGAAGAT 260 Query 311 GGGATTTATCGATCTGGGTTTCCTC-AGCTGGAGAATTTCGGATT-CTTATCAACCCTAA 368 || |||||||||||||||||||||| | || ||||||||| | || |||| |||||||| Sbjct 261 GGAATTTATCGATCTGGGTTTCCTCGACCT-GAGAATTTCAGTTTCCTTA-AAACCCTAA 318 Query 369 ATCTTCGATCCATCATTTATCTGTGTCCTGAACCATACCCTGAGGACAATCTCAAGTCTC 428 ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 319 ATCTTCGTTCCATCATTTATCTGTGTCCTGAACCATACCCAGAGGAGAATCTCAAGTTTC 378 Query 429 TTCAATCCAACAACATTAAGCTTTTTCAGTTCGGGATTGAAGGCAAAACGGATCCTCCAA 488 || | | |||||||||||||||| || || || || |||||||||||||||||||||| Sbjct 379 TTGAGGCTAACAACATTAAGCTTTACCAATTTGGAATCGAAGGCAAAACGGATCCTCCAA 438 Query 489 CTCCTATGCCAAAGGATACAGTGTTG-AGTGCTCTTAGAGTACTAGTTGATGTTCGAAAT 547 ||||||||||||| |||||||| ||| | |||||| | ||| |||||||||| |||| Sbjct 439 CTCCTATGCCAAAAGATACAGTTTTGGA-TGCTCTCAAAGTTTTAGTTGATGTGAGAAAC 497 Query 548 CATCCAATTCTCATCCACTGTAAGCGCGGGAAGCATAGGACAGGTTGTCTTGTGGGATGC 607 |||||||||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct 498 CATCCAATTCTCATACATTGCAAACGCGGGAAGCATAGGACAGGTTGTCTAGTGGGATGC 557 Query 608 TTGAGGAAAGTGCAAAACTGGTGTTTGTCATCGGTTCTTGAGGAATATCAAAAGTGTGCG 667 || || ||||| || | ||||||||| |||||||| || ||||| || || ||| ||| Sbjct 558 TTAAGAAAAGTTCAGAGCTGGTGTTTATCATCGGTGCTCGAGGAGTACCAGAAGAACGCG 617 Query 668 GGTTTGAAATGGAGACAAAGAGATTT-AAGGTTCATAGAGG-ATTTTGATGT-GCTCAGA 724 ||||| |||||||||||||| || || || || ||||||| |||| ||| | | | || Sbjct 618 GGTTTAAAATGGAGACAAAGGGACTTGAATTTT-ATAGAGGCATTT-GATATAG-TGAGC 674 Query 725 TTGA-AGCAATGTCTATACAGCATTATCTATCAGTA-CAATGGGTATGGTCT-CAAGAGA 781 |||| | || ||||| | ||||| || |||||||| || || ||||| || |||||| Sbjct 675 TTGAGA-CAGTGTCTCTTGAGCATCATGTATCAGTATCAC-GGTTATGG-CTTCAAGAGG 731 Query 782 AGAAAGTTG-CTGTATCAAGAAGAGAATGT 810 |||| |||| | ||| ||||||||||||| Sbjct 732 AGAAGGTTGGCA-TATGAAGAAGAGAATGT 760 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49681571383 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5