BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488531
Length=2745
Score E
Sequences producing significant alignments: (Bits) Value
AT5G16730.1 | Symbols: | Plant protein of unknown function (DU... 3114 0.0
AT3G02930.1 | Symbols: | Plant protein of unknown function (DU... 1472 0.0
> AT5G16730.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr5:5497643-5500845 FORWARD LENGTH=2879
Length=2879
Score = 3114 bits (1686), Expect = 0.0
Identities = 1971/2108 (94%), Gaps = 21/2108 (1%)
Strand=Plus/Plus
Query 252 ACTACTACTACGGGGAAATCAACTCCCGCAACTCCAAGAATAGCAAAAAGGGCAGTGAAT 311
|||||| |||| ||||||||| |||| ||||||||||||||||||||||| |||| |||
Sbjct 293 ACTACTCCTACCGGGAAATCATCTCCAGCAACTCCAAGAATAGCAAAAAGAACAGTTAAT 352
Query 312 AAATCCGAAACTAGTAATAATTCTCCATCAACTACTACTACTACTCCACATTCACGTCTT 371
||||||||||||||||||||| | | || | | ||||||||||||||||||||||||||
Sbjct 353 AAATCCGAAACTAGTAATAATAATTC-TCCA-T-CTACTACTACTCCACATTCACGTCTT 409
Query 372 TCTCTTGATCGCTCTTCTCCAAATTCCAAGTCTTCTTCTGTTGAGAGACGATCTCCAAAG 431
||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 410 TCTCTTGATCGTTCTTCTCCAAATTCCAA---ATCTTCTGTTGAGAGACGATCACCAAAG 466
Query 432 CTTCCAACTCCTCCTGAGAAAACTCAAGCGCG-G--GTAGCGGTGAAAGGAACAGAATCA 488
||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||||
Sbjct 467 CTTCCAACTCCTCCTGAGAAATCTCAAGCGCGAGTAGCAGCGGTGAAAGGAACAGAATCA 526
Query 489 CCGC--A-GA-C-C-CGGTTGAGTCAAATCAAGGAAGATTTCAAGAAAGCTAATGAGCGG 542
|||| | || | | ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 527 CCGCAGACGACCACACGGTTGAGTCAGATCAAGGAAGATTTGAAGAAAGCTAATGAGCGG 586
Query 543 ATTA-CTTCATTGGAGAAGGATAAAGCTAAAGCACTTGATGAACTCAAACAAGCCAAAAA 601
| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 587 A-TATCTTCATTGGAGAAGGATAAAGCTAAAGCACTTGATGAACTCAAACAAGCTAAAAA 645
Query 602 AGAAGCTGAAGAAGCGACTGTGAAGCTGGTTGATGCTTTGAAAGCTCAGAAACATGTAGA 661
|||||||||| ||| |||| ||||||| | ||||||||| ||||||||||| ||||| ||
Sbjct 646 AGAAGCTGAACAAGTGACTCTGAAGCTTGATGATGCTTTAAAAGCTCAGAAGCATGTGGA 705
Query 662 GGAGAATTCTGAGATTGAGAAGTTTCAGGCTGTTGAGGCGGGGATCGAGGCAGTTCAGAA 721
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 706 GGAGAATTCTGAGATTGAAAAATTTCAGGCTGTTGAGGCAGGGATCGAGGCAGTTCAGAA 765
Query 722 CAATGAAGAAGAATTGAAGAAAGAACTAGAGAGTGTTAAGAACCAACATGCATCAGATTC 781
||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||
Sbjct 766 CAATGAAGAAGAATTGAAGAAAGAACTTGAGACTGTTAAGAACCAACATGCTTCGGATTC 825
Query 782 AGCTGCTCTTGTTTCCGTTAGACTGGAGCTTGAGAAAATCAATGAAGAATTGGTTGCGGC 841
|||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 826 TGCTGCTCTTGTTGCGGTTAGACAGGAGCTTGAGAAAATCAATGAAGAATTGGCTGCGGC 885
Query 842 CAATGATGCTAAGACG-AAGGCCTTGAGCCAAGCAGATGATGCTAGTAAGACGGCTGATA 900
||||||||||| | ||||||||||||||||| || |||||||||||||||||||| |
Sbjct 886 TTTTGATGCTAAGA-GTAAGGCCTTGAGCCAAGCGGAGGATGCTAGTAAGACGGCTGAGA 944
Query 901 TTCATGCGGAGAAAGTTGACATCTTGTCTTCGGAGTTGGCGCGCTTGAAAGCTTTGCTTG 960
||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct 945 TTCATGCAGAGAAAGTTGACATCTTGTCTTCGGAGTTAACGAGGTTGAAAGCTTTGCTTG 1004
Query 961 ATTCAACCCGAGAAAAGACTGCCATATCGGGCAACGAGATGGTTGCCAAGCTAGAAGACG 1020
||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1005 ATTCAACCCGAGAGAAGACTGCCATATCGGATAACGAGATGGTTGCCAAGCTAGAAGACG 1064
Query 1021 AGATTGTGGTTTTGAAAAGAGATCTTGAGAAAGCGAGAGGTTTCAAGGCAGAGGTTAAAG 1080
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1065 AGATTGTGGTTTTGAAAAGAGATCTTGAGTCAGCGAGAGGTTTTGAGGCAGAGGTTAAAG 1124
Query 1081 AAAAAGAGGTGATCATCGAGAAGCTTAATGTTGACCTCGAAGCTTCGAAGATGGCAGAGT 1140
|||||||| ||||| |||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct 1125 AAAAAGAGATGATCGTCGAGAAGCTTAATGTTGACCTTGAAGCTGCGAAGATGGCTGAGT 1184
Query 1141 TTTATGCACACAACTTGTCTGACGAGTGGCAGAGCAAAGCCAAAGAACTGGAGGAACAGC 1200
| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTAATGCACACAGCTTGTCTAACGAGTGGCAGAGCAAAGCCAAAGAACTGGAGGAACAGC 1244
Query 1201 TAGAAGAAGCTAACAAGTTGGAGAGATCTGCTTCTGTATCTTTGGAATCTGTGATGAAAC 1260
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1245 TAGAAGAAGCTAACAAGTTGGAGAGGTCTGCTTCTGTATCTTTGGAATCTGTGATGAAAC 1304
Query 1261 AGCTTGAAGGAAGCAATGATAAATTGCATGATATGGAAACTGAAATCACTGATCTTAAGG 1320
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1305 AGCTTGAAGGAAGCAATGATAAATTGCATGACACGGAAACTGAAATCACTGATCTTAAGG 1364
Query 1321 AGAAAATCGTGACATTGGAGACGACAATTGCTAAACAAAAGGAGGATCTCGAGGAATCTG 1380
||| ||| |||||||||||||||||| |||||||||||||||||||||| |||| ||| |
Sbjct 1365 AGAGAATTGTGACATTGGAGACGACAGTTGCTAAACAAAAGGAGGATCTTGAGGTATCAG 1424
Query 1381 AGAAACGGTTGGGCAGTGCAGAAGAAGAATTATCTAAGACTGAAAAAGAAGTAGAGAACT 1440
|| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |
Sbjct 1425 AGCAACGGTTGGGCAGTGTAGAAGAAGAAGTATCTAAGAATGAAAAAGAAGTAGAGAAGT 1484
Query 1441 TGAAGAGTGAGCTTGAAACTTTGAAGGAGGAGAAAAATCGGGCTTTAAAGAAGGAGCAAG 1500
|||||||||||||||| ||| ||||||||||||| ||||| ||||| |||||||||||||
Sbjct 1485 TGAAGAGTGAGCTTGAGACTGTGAAGGAGGAGAAGAATCGTGCTTTGAAGAAGGAGCAAG 1544
Query 1501 ATGCTACTTCAAGAGTTCAAAGGCTCTCGGAAGAGAAAAGCAAGCTCTTATCAGATCTAG 1560
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1545 ATGCTACTTCAAGGGTTCAAAGGCTCTCAGAAGAGAAAAGCAAGCTCTTATCAGATTTAG 1604
Query 1561 AGAGCTCAAAAGAGGAAGAGGAGAAGAGTAAGAAAGCGATGGAGAGTTTAGCTTCGGCTC 1620
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 1605 AGAGCTCAAAAGAGGAAGAGGAGAAGAGTAAGAAAGCAATGGAGAGTTTGGCTTCAGCTT 1664
Query 1621 TGCACGAAGTGTCGAGTGAAGGAAGGGAGTTGAAAGAGAAGTTGTTGAGTCAAGGCGATC 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 TGCACGAAGTGTCGAGTGAAGGAAGGGAGTTGAAAGAGAAGTTGTTGAGTCAAGGCGATC 1724
Query 1681 ACGAGTATGAATCACAAATAGAAGACTTAAAGTTGGTTATTAAAGCGACGAACGAGAAGT 1740
||||||||||| |||||||||| ||||| |||||||| |||||||| || ||||||||||
Sbjct 1725 ACGAGTATGAAACACAAATAGATGACTTGAAGTTGGTGATTAAAGCCACAAACGAGAAGT 1784
Query 1741 ATGAGAATATGCTTGACGAGGCGAGACATGAGATCGATGTTCTTGTTAGCGCGGTCGAAC 1800
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1785 ACGAGAATATGCTTGACGAGGCGAGACATGAGATCGATGTTCTTGTTAGCGCGGTTGAAC 1844
Query 1801 AAACCAAGAAACATTTCGAGAGCTCAAAGACGGATTGGGAGATGAAAGAAGCCAATTTGG 1860
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1845 AAACCAAGAAACATTTCGAGAGCTCAAAGAAGGATTGGGAGATGAAAGAAGCCAATTTGG 1904
Query 1861 TGAATTACGTGAAGAAAATGGAAGAAGACGTTGCTTCGATGGGGAAGGAAATGAATAGGC 1920
||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1905 TGAATTATGTGAAGAAAATGGAAGAAGATGTTGCTTCGATGGGGAAAGAAATGAATAGGC 1964
Query 1921 TAGATAATCTGCTGAAGAGAACCGAGGAAGAAGCCGATGCAGCTTGGAAGAAAGAAGCCC 1980
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1965 TGGATAATCTGCTGAAGAGAACCGAGGAAGAAGCCGATGCAGCTTGGAAGAAAGAAGCAC 2024
Query 1981 AGACGAAAGACAGTTTAAAAGAAGTGGAAGAAGAGGTCGTTTATCTTCAGGAAACTCTCG 2040
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2025 AGACGAAAGACAGTTTAAAAGAAGTGGAAGAAGAGATTGTTTATCTTCAGGAAACTCTCG 2084
Query 2041 GGGAAGCAAAAGCCGAAAGCATGAAGCTAAAGGAGAATCTGTTGGATAAAGAAACTGAGT 2100
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2085 GGGAAGCAAAAGCTGAAAGCATGAAGCTAAAGGAGAATCTGTTGGATAAAGAAACTGAGT 2144
Query 2101 TTCAAAACGTCATTCACGAAAACGAGGATCTGAGGGCGAAGGAGGATGTTTCGT-TGAAG 2159
|||| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct 2145 TTCAGAACGTCATTCACGAAAACGAGGATCTGAAGGCGAAGGAGGATGTTTC-TCTGAAG 2203
Query 2160 AAGATCGAGGAGTTATCAAAGTTACTCGAGGAAGCAATATTGGCCAAGAAGCAACCTGAA 2219
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2204 AAGATCGAGGAGTTATCGAAGTTACTCGAGGAAGCAATATTGGCCAAGAAGCAACCGGAA 2263
Query 2220 GAAGAGAATGGCGAGCTCAGTGAGAGCGAAAAAGACTATGATTTGCTACCAAAAGTGGTT 2279
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2264 GAAGAGAATGGCGAGCTCAGTGAGAGCGAGAAAGACTATGATTTGCTACCAAAAGTGGTT 2323
Query 2280 GAGTTTTCTTCTGAGAACGGTCATAGAAGTGTAGAAGAGAAATCTCCTAAAGTCGAAACC 2339
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2324 GAGTTTTCTTCTGAGAACGGTCATAGAAGTGTAGAAGAGAAATCTGCTAAAGTCGAAACC 2383
Query 2340 TTTGATCA 2347
|||||||
Sbjct 2384 CTTGATCA 2391
Score = 560 bits (303), Expect = 2e-158
Identities = 374/405 (92%), Gaps = 18/405 (4%)
Strand=Plus/Plus
Query 2353 ATGGTAATGGTATGGAGGAGAAAGAAGTGAATGGAAAACCCGAGGCGGAAACCGAGAAGA 2412
|||| || ||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 2430 ATGGCAACGGTATGGAGGAGAAAGAAGTGAATGGAAAACCCGAGGTGGAAACCGAAAAGA 2489
Query 2413 AGGAGAAGAAAGATGAATCCC----------C--AGATGATTCGGTTGAAGTTATATTCA 2460
|||||||||||||||| |||| | ||||||||||||||||||||||||||
Sbjct 2490 AGGAGAAGAAAGATGAGTCCCAAGATGATGACAAAGATGATTCGGTTGAAGTTATATTCA 2549
Query 2461 AAATGTGGGAAAGTTGCCAAATCGAGAAGAAAGAAGCTTTTCCCGACAAGAAATCAGAAC 2520
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2550 AAATGTGGGAAAGTTGCCAAATCGAGAAGAAAGAAGCTTTTCCGGACAAGAAATCAGAAC 2609
Query 2521 TAGAGTCTCAAGAAGAAGAAGAGGATTCAAGCAAAATCGATGAAAGCGACAAAACCTCAA 2580
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 TAGAGTCACAAGAAGAAGAAGAGGATTCAAGCAAAATCGATGAAAGCGACAAAACCTCAA 2669
Query 2581 CAGAGAACATCGATGAAACAGGAAACGCTTTAACCGCCGAAGACCAGCTTATGATGGAGA 2640
||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||
Sbjct 2670 CAGAGAACATCGATGAAACCGGAAACGCTTTAACCGCAGAAGATCAGCTTACGATGGAGA 2729
Query 2641 AGAAGATCAAGAAAAAGAAGACTTTACTTGGTAAAGTTGGGAATCTTCTCAAGAAGAAAG 2700
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 AGAAGATCAAGAAGAAGAAGACTTTACTTGGTAAAGTTGGGAATCTTCTCAAGAAGAAAG 2789
Query 2701 CACCCGCACCCGTAAACCAGAAATAACAAACTCTTCGAGGTAAGG 2745
|||| | |||||||||||||||||||||||||||||||||
Sbjct 2790 CACCTG------TAAACCAGAAATAACAAACTCTTCGAGGTAAGG 2828
Score = 167 bits (90), Expect = 6e-40
Identities = 105/111 (95%), Gaps = 6/111 (5%)
Strand=Plus/Plus
Query 1 TAGTGAGGCCACTCTGGAGACAACCACACCTGCCATTATCTAT--CATTCTCCGTTACTT 58
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 40 TAGTGAGGCCACTCTGGAGACAACCACACCTGCCATTATCTATATCATTCTCCGTTACTT 99
Query 59 CGATCCCACCGATTCGAATCATATTGTCTCTCTCTCTTTCTTGATCTGAAA 109
|||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 100 CGATCCCACCGATTCGAATCAT-T---CTCTCTCTCTTTCTTGATCTGAAA 146
> AT3G02930.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr3:655306-658319 FORWARD LENGTH=2421
Length=2421
Score = 1472 bits (797), Expect = 0.0
Identities = 1576/1946 (81%), Gaps = 77/1946 (4%)
Strand=Plus/Plus
Query 426 CCAAAGCTTCCAACTCCTCCTGAGAAAACTCAAGCGCGGGTAGCGGTGAAAGGAACAGAA 485
||||||| |||||| || || || ||||||||| | || || |||| || | |||||
Sbjct 197 CCAAAGC-TCCAACCCCACCAGAAAAAACTCAAATAC-GG--GCTGTGAGAGTATCAGAA 252
Query 486 TCACCGCAGACC-CGGTTGAG-TCAAATCAAGGAAGATTTCAAGAAAGCTAATGAGCGGA 543
| |||| ||| | | | || |||||||||||||||||| |||||||| ||||||| ||
Sbjct 253 T---CGCA-ACCTCAG-TCAGTTCAAATCAAGGAAGATTTAAAGAAAGCCAATGAGCTGA 307
Query 544 TTA-CTTCATTGGAGAAGGATAAAGCTAAAGCACTTGATGAACTCAAACAAGC-CAAAAA 601
|| | || | ||||| || |||||||||||||||||| |||| ||| |||| | ||
Sbjct 308 -TAGCATCGCTCGAGAATGAAAAAGCTAAAGCACTTGATCAACTTAAAGAAGCGC-GGAA 365
Query 602 AGAAGCTGAAGAAGCGA-CTGTGAAGCTGGTTGATGCTTTGA-AAGCTCAGAAACATGT- 658
|||||||||||| || | ||| ||| || | ||| ||||| | ||||||||||| | ||
Sbjct 366 AGAAGCTGAAGAGGC-ATCTGAGAAACTAGATGAGGCTTT-AGAAGCTCAGAAA-AAGTC 422
Query 659 AGAGGAGAA-TTCTGAGATTGAGAAGTTTCAGGCTGTTGAGGCGGGGATCGAGGCAGTTC 717
|||||| ||| || |||||||| ||| ||| ||||||||| ||||| ||||| ||||
Sbjct 423 CCTGGAGAACTTC-GAAATTGAGAAATTTGAGGTTGTTGAGGCAGGGATAGAGGCGGTTC 481
Query 718 AGA-ACAATGAAGAAGAATTGAAGAAAGAACTAGAGAGTGTTAAGAACCAACATGCATCA 776
||| | || |||||||| ||||||||||||||||||| ||| |||||||||||||| |||
Sbjct 482 AGAGA-AAAGAAGAAGAGTTGAAGAAAGAACTAGAGAATGTCAAGAACCAACATGCTTCA 540
Query 777 GATTCAGCTGCTCTTGTTTCCGTTAGACTGGAGCTTGAGAAAATCAATGAAGAATTGGTT 836
|| |||||| ||||| ||| || | || |||||| ||||| ||||| ||||||||| |
Sbjct 541 GAATCAGCTACTCTTCTTTTGGTAACACAGGAGCTGGAGAATGTCAATCAAGAATTGGCT 600
Query 837 GCGGCCAATGATGCTAAGACG-AAGGCCTTGAGCCAAGCAGATGATGCTAGTAAGACGGC 895
|| || ||||| |||| | ||||| ||| | | ||||||||||||||||||| |||
Sbjct 601 AATGCTAAAGATGCCAAGA-GTAAGGCTTTGTGTCGTGCAGATGATGCTAGTAAGATGGC 659
Query 896 TG-ATATTCATGCGGAGAAAGTTGACATCTTGTCTTCGGAGTTGGCGCGCTTGAAAGCTT 954
|| | |||||||| ||||||||||| |||||||| || ||||| || ||||| ||||
Sbjct 660 TGCA-ATTCATGCAGAGAAAGTTGAAATCTTGTCGTCAGAGTTAATACGGTTGAAGGCTT 718
Query 955 TGCTTGATTCAACCCGAGA-AAAG-ACTGCCATAT-CGGGCAACGAGA-TGGTTGCCAAG 1010
||||||||||||| ||||| || | | | ||| | | | || |||| || || |||
Sbjct 719 TGCTTGATTCAACTCGAGAGAAGGAAAT--CATCTCCAAG-AATGAGATTGCTT-TAAAG 774
Query 1011 CTAGAAGAC-GAGATTGTGGTTTTGAAAAGAGATCTTGAGAAAGCGAGAGGTTT-CAAGG 1068
|||| | | ||||| |||| | | |||||||| |||||||| |||||| |||| || |
Sbjct 775 CTAG-GGGCGGAGATAGTGGATCTAAAAAGAGACCTTGAGAATGCGAGAAGTTTGGAA-G 832
Query 1069 CAGAGGTTAAAGAAAAAGAGGTGATCATCGAGAAGCTTAATGTTGACCTCGAAGCTTCGA 1128
|| |||| || ||| |||| ||||||| ||| |||||||||||||| | |||||| | |
Sbjct 833 CAAAGGTCAAGGAACTAGAGATGATCATTGAGCAGCTTAATGTTGACTTAGAAGCTGCAA 892
Query 1129 AGATGGCAGAGTTTTATGCACACAAC-TTGTCTGACGAGTGGCAGAGCAAAGCCAAAGAA 1187
| |||||||| | |||||| || | ||| ||||||||||||| | |||||| ||||||
Sbjct 893 AAATGGCAGAATCTTATGCGCATGGCTTTG-CTGACGAGTGGCAAAACAAAGCGAAAGAA 951
Query 1188 CTGGAGGAACAGCTAGAAGAAGCTAACAAGTTGGAGAGATCTGCTTCTGTATCTTTGGAA 1247
|||||| ||| | | ||||||||||||||| |||||| || |||||| |||||| ||| |
Sbjct 952 CTGGAGAAACGGTTGGAAGAAGCTAACAAGCTGGAGAAATGTGCTTCGGTATCTCTGGTA 1011
Query 1248 TCTGTGATGAAA-CAGCTTGAAGGAAGCAATGA-TAAATTGCATGATATGGAAACTGAAA 1305
||||||| ||| ||||| |||| ||||||| | || |||||| ||||||||| ||||||
Sbjct 1012 TCTGTGA-CAAAGCAGCTGGAAGTAAGCAAT-AGTAGATTGCACGATATGGAATCTGAAA 1069
Query 1306 TCACTGATCTTAAGGAGAAAATCGTGACATTGGAGACGACAATTGCTAAACAAAAGGAGG 1365
| |||||||||||||||||||| | | |||||||| |||| |||||| ||||||| |
Sbjct 1070 TTACTGATCTTAAGGAGAAAATTGAGTTATTGGAGATGACAGTTGCTAGTCAAAAGGTTG 1129
Query 1366 ATCTCGAGGAATCTG-AGA-AACGGTTGGGCAGTGCAGAAGAAGAATTATCTAAGACTGA 1423
|||| ||| |||||| | | || | | || | |||||||||||||| |||||||| |||
Sbjct 1130 ATCTTGAGAAATCTGAACAGAA--GCTAGGTATTGCAGAAGAAGAATCATCTAAGAGTGA 1187
Query 1424 AAAAGAAGTAGAG-AACTTGAAGAGTGAGCTTGAAACTTTGAAGGAGGAGAAAAATCGGG 1482
|||||||| |||| ||| |||||| ||||||||||||| |||| || ||||||| | ||
Sbjct 1188 AAAAGAAGCAGAGAAAC-TGAAGAATGAGCTTGAAACTGTGAATGAAGAGAAAACCCAGG 1246
Query 1483 CTTTAAAGAAGGAGCAAGATGCTACTTCAAGAGTTCAAAGGCTCTCGGAAG-AGAAAAGC 1541
||||||||||||||||||||||||||||||| || |||||||||| ||||| | |||||
Sbjct 1247 CTTTAAAGAAGGAGCAAGATGCTACTTCAAGTGTGCAAAGGCTCTTGGAAGAAAAAAAG- 1305
Query 1542 AAGCTCTTATCAGATCTAGAGAGCTCAAAAGAGGAAGAGGAGAAGAGTAAGAAAGCGATG 1601
||| |||| ||||| || |||||||| || |||||||||||||||||||||||||| |||
Sbjct 1306 AAGATCTTGTCAGAACTGGAGAGCTCGAAGGAGGAAGAGGAGAAGAGTAAGAAAGCAATG 1365
Query 1602 GAGAGTTTAGCTTCGGC-TCTGCACGAAGTGTCGAGTGAAGGAAGGGAGTTGAAAGAGAA 1660
|||||||||||||| || | ||||||||||||| |||||| | | ||||||||||| ||
Sbjct 1366 GAGAGTTTAGCTTCAGCAT-TGCACGAAGTGTCAAGTGAATCACGTGAGTTGAAAGAAAA 1424
Query 1661 GTTGTTGAGTCAAGGCGATCACGAGTATGAATCACAAATAGAAGACT-TAAAGTTGGTTA 1719
||| |||||| ||| ||||| | |||||| |||| |||||||| | | |||||||| |
Sbjct 1425 ATTGCTGAGTCGAGGTGATCAAAATTATGAAACACAGATAGAAGA-TCTGAAGTTGGTGA 1483
Query 1720 TTAAAGCGACGAACGAGAAGTATGAGAATATGCTTGACGAGGCGAGACATGAGATCGATG 1779
||||||| |||||| | ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1484 TTAAAGCAACGAACAACAAGTACGAGAACATGCTTGACGAGGCGAGACATGAGATCGATG 1543
Query 1780 TTCTTGTTAGCGCGGTCGAACAAACCAAGAAACA-TTTCGAGAGCTCAAAGACGGATTGG 1838
||||||| | ||||| ||||||||||||||||| ||| |||||| ||| | ||||||
Sbjct 1544 TTCTTGTCAATGCGGTAGAACAAACCAAGAAACAGTTT-GAGAGCGCAATGGTAGATTGG 1602
Query 1839 GAGATGAAAGAAGCCAATTTGGTGAATTACGTGAAGAAAATGGAAGAAGACGTTGCTTCG 1898
||||||| ||||||| |||||||||| |||||||| || | || ||||| ||| ||||
Sbjct 1603 GAGATGAGAGAAGCCGGTTTGGTGAATCACGTGAAGGAATTTGATGAAGAAGTTTCTTCA 1662
Query 1899 ATGGGGAAGGAAATGAATAGGCTAGATAATCTGCTGAAGAGAACCGAGGAAGAAGCCGAT 1958
|||||||| |||||||||||| | | ||| || | || || || |||||||||| |||
Sbjct 1663 ATGGGGAAAGAAATGAATAGGTTGGGCAATTTGGTTAAAAGGACAAAGGAAGAAGCTGAT 1722
Query 1959 GCAGCTTGG-AAGAAAGAAGCCCAGACGAAAGACAGT-TTAAAAGAAGTGGAAGAAGAGG 2016
||| | ||| || |||||| |||| | || ||| || ||||| ||||||||||| ||||
Sbjct 1723 GCATCATGGGAA-AAAGAATCCCAAATGAGAGATTGTCTTAAA-GAAGTGGAAGATGAGG 1780
Query 2017 TCG-TTTATCTTCAGGAAACTCTCGGGGAAGCAAAAGCCGAAAGCATGAAGCTAAAGGAG 2075
| | |||||||||||||||||||| ||||||| ||||| |||| | |||| ||||||| |
Sbjct 1781 T-GATTTATCTTCAGGAAACTCTCAGGGAAGCGAAAGCTGAAACCTTGAAACTAAAGGGG 1839
Query 2076 AATCTGTTGGATAAAGAAACTGAGTTTCAAAACGTCATTCACGAAAACGAGGATCTGAGG 2135
|| ||||||||||||||||||||||||||| | | |||| || ||||| || || ||
Sbjct 1840 AAGATGTTGGATAAAGAAACTGAGTTTCAAAGCATTGTTCATGAGAACGATGAACTCAGA 1899
Query 2136 GCGAAGGAGGATGTTTCGT-TGAAGAAGATCGAGGAGTTATCAAAGTTACTCGAGGAAGC 2194
| ||| |||||| ||| | ||||||||||| |||| |||| |||||||||| |||||
Sbjct 1900 GTGAAACAGGATGATTC-TCTGAAGAAGATCAAGGAACTATCGGAGTTACTCGAAGAAGC 1958
Query 2195 AATATTGGCCAAGAAGCA-ACCTGAAGAAGAGAATGGCGAGCTCAGTGAGAGCGAAAAAG 2253
| | | ||||||||| || | |||||| || | || |||||||||||||| |||||||
Sbjct 1959 A-T-T-GGCCAAGAAACATAT-TGAAGA-GA-AC-GGTGAGCTCAGTGAGAGTGAAAAAG 2011
Query 2254 ACTATGATTTGCTACCAAAAGTGGTTGAGTTTTCTTCTGAGAACGGTCATAGAAGTGTAG 2313
||||||||||||| ||||| ||||||||||||||| || || ||| ||||||||| ||
Sbjct 2012 ACTATGATTTGCTGCCAAAGGTGGTTGAGTTTTCTGAGGAAAATGGTTATAGAAGTGCAG 2071
Query 2314 AAGAGAAATCTCCTAAAGTCGAAACC 2339
||||||| ||| ||||||| || |||
Sbjct 2072 AAGAGAAGTCTTCTAAAGTAGAGACC 2097
Score = 86.1 bits (46), Expect = 2e-15
Identities = 82/99 (83%), Gaps = 4/99 (4%)
Strand=Plus/Plus
Query 2610 TTAACCGCCGAAGACCAGCT-TATGATGGAG-AAGAAGATCAAGAAAAAGAAGACTTTAC 2667
||||||| ||||| |||| | ||| ||| ||| ||| ||||| |||||||| ||
Sbjct 2311 TTAACCGGAGAAGATGAGCTGT-TGAAAGAGAAAG-AGAAGAAGAAGAAGAAGACATTGT 2368
Query 2668 TTGGTAAAGTTGGGAATCTTCTCAAGAAGAAAGCACCCG 2706
||||||||||||||||||||||||||||||||| |||||
Sbjct 2369 TTGGTAAAGTTGGGAATCTTCTCAAGAAGAAAGGACCCG 2407
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136353751074
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5