BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488572 Length=365 Score E Sequences producing significant alignments: (Bits) Value AT5G17130.1 | Symbols: | cysteine-type peptidases | chr5:56369... 592 1e-168 > AT5G17130.1 | Symbols: | cysteine-type peptidases | chr5:5636972-5637534 FORWARD LENGTH=372 Length=372 Score = 592 bits (320), Expect = 1e-168 Identities = 351/366 (96%), Gaps = 2/366 (1%) Strand=Plus/Plus Query 1 ATGGAAGACTACAATGAT-GTTTTCGGTGGCATTGGAACCGGAGGAGGGAAAGGCAAAGG 59 |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1 ATGGAAGACTACAATGGTGGTTTT-GGTGGCATTGGAACCGGGGGAGGGAAAGGCAAAGG 59 Query 60 GAAAAATATACCAAACCAATGCAAACTGGATGTTGAAGCTCGACGTGAACAAGCGAAGAA 119 |||||||||||||||||| |||| || ||||||||||||| |||||||||||||||||| Sbjct 60 AAAAAATATACCAAACCAACGCAAGCTAGATGTTGAAGCTCAACGTGAACAAGCGAAGAA 119 Query 120 AACACAACAAGCTGGTGAAAGAGCAGAATCAGTCGAAGAATTTCCAATTCCAGAAGATTA 179 ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 120 AACACAACAAGATGGTGAAAGAGCAGAATCAGTCGAGGAATTTCCAATTCCAAAAGATTA 179 Query 180 TGGGGATGGTAGTCGTATCGATTTCTGTTGGACTCGTACACATAAGCATTTGCTACAAAG 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 180 TGGGGATGGTAGTCGTATCGATTTCTGTTGGACTCGTACACATAAGCATTTGCTACAGAG 239 Query 240 AATTGTAGAGCAAAAAGAAGACGACTGTTGGGCTTGGGCTCTAGTTAGAATCTTACAATT 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 240 AATTGTAGAGCAAAAAGAAGACGATTGTTGGGCTTGGGCTCTAGTTAGAATCTTGCAATT 299 Query 300 TTACTACAACATGAACATTACCGCAATTGCTGAGCAGAAGACCTTATCAATCAAATCACT 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TTACTACAACATGAACATTACCGCAATTGCTGAGCAGAAGACCTTATCAATCAAATCACT 359 Query 360 TGTCAA 365 |||||| Sbjct 360 TGTCAA 365 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17141302409 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5