BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488575 Length=468 Score E Sequences producing significant alignments: (Bits) Value AT5G17150.1 | Symbols: | Cystatin/monellin superfamily protein... 326 1e-88 AT5G17120.1 | Symbols: | Cystatin/monellin superfamily protein... 309 1e-83 > AT5G17150.1 | Symbols: | Cystatin/monellin superfamily protein | chr5:5638475-5639592 REVERSE LENGTH=835 Length=835 Score = 326 bits (176), Expect = 1e-88 Identities = 204/218 (94%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 250 AAATTAAACGATGAAAAGGGAAATACTGTGGAATTGGTAGAGATTGTGAGAGCTATTGAA 309 |||||||||||||| |||||| | ||||||||||||||||||||||| |||| |||||| Sbjct 391 AAATTAAACGATGAGAAGGGACAGACTGTGGAATTGGTAGAGATTGTCAGAGTTATTGAC 450 Query 310 TCAGGAGGAGCTAGATGGAATTCTTATATAACGTTTATGGCTCGAGAGTATTCTAATGGA 369 ||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||| Sbjct 451 TCAGGAGGATTTAGATGGTATTCATATATAACGTTTATGGCTCGAGAGTATCCTAATGGA 510 Query 370 CCTCTTGTTGAGTACCAAGCCAAAGTCATGAACTATGCAGGAAACGAGAAACCTCCTTTC 429 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 511 CCTCTTGTGGAGTACCAAGCCAAAGTCATGAACTATGCAGGAAACGAGAAACCTCCTTTC 570 Query 430 CCTATTCTTTGCAGACCAAGTCCTAAACTCTCTGTTTA 467 || || |||||||||||||||||||||||||||||||| Sbjct 571 CCGATACTTTGCAGACCAAGTCCTAAACTCTCTGTTTA 608 Score = 274 bits (148), Expect = 5e-73 Identities = 221/254 (87%), Gaps = 14/254 (6%) Strand=Plus/Plus Query 1 ATGGCTCCTGAATCGACGGCGGAACAAGCTTCGGCGACGGATATGGTGAACTCATCGCTC 60 ||||||||||||||||||| | ||||||||||| |||||||||||||||| || || || Sbjct 1 ATGGCTCCTGAATCGACGGTGAAACAAGCTTCGACGACGGATATGGTGAATTCTTCTCTA 60 Query 61 ATGGAAGAGCACAAAGTCGAAGA-G--GAAG--G-C--A-GC---GATATCGACAGAAGG 108 ||||||||||||||||||||||| | |||| | | | || ||||||||||||||| Sbjct 61 ATGGAAGAGCACAAAGTCGAAGAGGAAGAAGAAGACGGAGGCAGTGATATCGACAGAAGG 120 Query 109 TATAAATACGTGCTAGGACCAGAACCGGAGTGGGATTTGGACAGCTACGATGGTCGTGAA 168 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 121 TATAAATACGTGCCAGGACCAGAACCGGAGTGGGATGTGGACAGCTACGATGGTCGTGAA 180 Query 169 TATGAATCCGATCCCGAAGATCGTCAGTTTTTCTCCGACGAAGACGATTATCAA-GAATT 227 || ||||||||||| ||||||||||| |||||||||| || || || ||| || |||| Sbjct 181 TACGAATCCGATCCTGAAGATCGTCAAATTTTCTCCGATGAGGATGAGTAT-AATGAATA 239 Query 228 TCGTATCCGCAAGC 241 ||||||||||||| Sbjct 240 CCGTATCCGCAAGC 253 > AT5G17120.1 | Symbols: | Cystatin/monellin superfamily protein | chr5:5628529-5629324 REVERSE LENGTH=624 Length=624 Score = 309 bits (167), Expect = 1e-83 Identities = 201/218 (92%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 250 AAATTAAACGATGAAAAGGGAAATACTGTGGAATTGGTAGAGATTGTGAGAGCTATTGAA 309 |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||||| Sbjct 406 AAATTAAACGATGAGAAGGGAACGACTGTGGAATTGGTAGAGATTGTAAGAGTTATTGAA 465 Query 310 TCAGGAGGAGCTAGATGGAATTCTTATATAACGTTTATGGCTCGAGAGTATTCTAATGGA 369 | ||||||||||| |||||||||||||||||||||||||||||| |||||| | |||||| Sbjct 466 TTAGGAGGAGCTACATGGAATTCTTATATAACGTTTATGGCTCGTGAGTATCCCAATGGA 525 Query 370 CCTCTTGTTGAGTACCAAGCCAAAGTCATGAACTATGCAGGAAACGAGAAACCTCCTTTC 429 ||||||||||||||||| ||||||||||||| |||| |||| | ||||||||||||||| Sbjct 526 CCTCTTGTTGAGTACCATGCCAAAGTCATGAGTTATGTAGGACAGGAGAAACCTCCTTTC 585 Query 430 CCTATTCTTTGCAGACCAAGTCCTAAACTCTCTGTTTA 467 |||||||| ||||||||||||||||||||||||||||| Sbjct 586 CCTATTCTCTGCAGACCAAGTCCTAAACTCTCTGTTTA 623 Score = 233 bits (126), Expect = 9e-61 Identities = 202/235 (86%), Gaps = 19/235 (8%) Strand=Plus/Plus Query 24 ACAAGCTTCGGCGACGGATATGGTGAACTCATCGCTCATGGAAGAGCACAAAGTC----- 78 |||||||||| ||||| | ||| ||||||| ||||||||||| |||||||||||| Sbjct 36 ACAAGCTTCGACGACGAAAATGATGAACTCTTCGCTCATGGAGGAGCACAAAGTCGAAGA 95 Query 79 ----G-A-A-GA-G--GAAGGCAGCGATATCGACAGAAGGTATAAATACGTGCTAGGACC 128 | | | || | ||||||||||||||||||||||| ||||||||||||| || ||| Sbjct 96 GGAAGAAGACGACGACGAAGGCAGCGATATCGACAGAAGATATAAATACGTGCCAGAACC 155 Query 129 AGAACCGGAGTGGGATTTGGACAGCTACGATGGTCGTGAATATGA-ATCCGATCCCGAAG 187 |||||||||||||||| ||||||||||||||||||||||||| || | | ||||| |||| Sbjct 156 AGAACCGGAGTGGGATGTGGACAGCTACGATGGTCGTGAATACGAGA-CAGATCCTGAAG 214 Query 188 ATCGTCAGTTTTTCTCCGACGAAGAC-GATTATCAAGAATTTCGTATCCGCAAGC 241 |||||||||||||||||||||||||| | ||||||||||||||||| |||||||| Sbjct 215 ATCGTCAGTTTTTCTCCGACGAAGACAG-TTATCAAGAATTTCGTACCCGCAAGC 268 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22253727121 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5