BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488611 Length=674 Score E Sequences producing significant alignments: (Bits) Value AT5G17450.1 | Symbols: HIPP21 | Heavy metal transport/detoxific... 948 0.0 > AT5G17450.1 | Symbols: HIPP21 | Heavy metal transport/detoxification superfamily protein | chr5:5755322-5756888 FORWARD LENGTH=659 Length=659 Score = 948 bits (513), Expect = 0.0 Identities = 629/680 (93%), Gaps = 27/680 (4%) Strand=Plus/Plus Query 1 ATACATATTAATTTATACACATATTTTTGATCATATATATACATAGtttttttG-T--TG 57 ||||||||||| || |||||| | ||||||| ||||| |||||||||||||| | | Sbjct 1 ATACATATTAA-TT-TACACACA--TTTGATC--ATATACACATAGTTTTTTTGCTGACG 54 Query 58 -AAGAGGAGAATGGGTGCATTTGATTATATATCTAGCTTTTGTTCATACACATATGCTAA 116 || | |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct 55 AAAAAAGAGAATGGGTGCATTTGATTATATCTCTAGCTTTTGTTCATATACATACGCTAA 114 Query 117 TGCCAAAACCAAGCGTAAGCCATTGCAGACTGTGGATATCAAGGTAAAAATGGACTGTGA 176 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 115 TGCCAAAACCAAGCGTAAGCCATTGCAGACAGTGGATATCAAGGTGAAAATGGACTGTGA 174 Query 177 TGGTTGTGAAAGAAGAGTTAGAAACGTGGTTCGTCGCATGAAAGGGGTGAAATCGGTGGA 236 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 TGGTTGTGAAAGGAGAGTTAGAAACGTGGTTCGTCGCATGAAAGGGGTGAAATCGGTGGA 234 Query 237 GGTGAACCGGAAACAGAGCCGGATAACGGTGAACGGACACGTGGACCCAAACAAGGTGTT 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 GGTGAACCGGAAACAGAGCCGGATAACGGTGAACGGACACGTGGACCCAAACAAGGTGTT 294 Query 297 GAAGAGAGTGAAGAGCACCGGTAAAAAGGCTGAGTTTTGGCCGTACATACCTCAACATAT 356 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 295 GAAGAGAGTGAAGAGCACCGGTAAAAAGGCTGAGTTTTGGCCTTACATACCTCAACATAT 354 Query 357 GGTCTATTACCCTTTTGCCCCTGGCATGTACGACAAACGCGCCCCTGCAGGCCACATCCG 416 |||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct 355 GGTCTATTACCCTTTTGCTCCTGGCATGTACGATAAACGTGCACCTGCAGGCCACATCCG 414 Query 417 CAACCCCACTCAATCGTTTCCAACCGCAAACGCTCCCGAGGAAAATTACGTTACTCTCTT 476 || |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| Sbjct 415 TAATCCCACTCAATCGTTTCCAACAGCAAACGCTCCCGAGGAAAATTACGTTTCCCTCTT 474 Query 477 CAGCGACGACAACGTCCACGCCGCTTGTTCCATCATGTGAGC-AACCAACCAAAAGATTA 535 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 475 CAGCGACGACAACGTCCACGCCGCTTGTTCCATCATGTGAGCCAACCAACCAAAAGATTA 534 Query 536 TTCATAATCTCTATTTTGTAATTTGTATACTTTTCTTACTTTTGTTAAAATCAAAAGGTA 595 |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 535 CTCATAATCTCCATTTTGTAATTTGTATACTTTT---------GTTAAAATCAAAAGGTA 585 Query 596 ATGTAGAAACTTTGTAATAAA-TTATAGAGACAACACTTAAAACGGAATCTATTTGATGG 654 |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 586 ATGTAGGAACTTTGTAATAAAATTATAGAGACAACAC------CGGAATCTATTTGATGG 639 Query 655 TTTATGTTTCGAACAATACT 674 |||||||||||||||||||| Sbjct 640 TTTATGTTTCGAACAATACT 659 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32601961403 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5