BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488686
Length=2632
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18190.1 | Symbols: | Protein kinase family protein | chr5:... 4078 0.0
AT3G03940.1 | Symbols: | Protein kinase family protein | chr3:... 2314 0.0
AT3G03930.1 | Symbols: | protein kinase-related | chr3:1011414... 566 5e-160
> AT5G18190.1 | Symbols: | Protein kinase family protein | chr5:6009967-6014689
REVERSE LENGTH=2674
Length=2674
Score = 4078 bits (2208), Expect = 0.0
Identities = 2471/2592 (95%), Gaps = 42/2592 (2%)
Strand=Plus/Plus
Query 57 ctgaagctttctctctatctatctcta-tctctaGGTGTGC-T-TCACAGCTAGAAAGTT 113
||||| |||||||||| | |||||| | | ||||||||||| | ||||||||||||||||
Sbjct 76 CTGAATCTTTCTCTCTCTTTATCTCCATTTTCTAGGTGTGCTTATCACAGCTAGAAAGTT 135
Query 114 CTCACATTTAAATCGCCGTAGTTGGAGAAAGCCGTCGGTTTCTCGTTTTGAAATTTCCAA 173
|| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 136 CTTACATTTAAATCGCCCTAGTTGGAGAAAGCCGTCGGTTTCTCATTTTGAAATTTCCAA 195
Query 174 GGAGATCTGAAAGTTTCAATTTTTTGGATCGATTTCATCGTTATCATAGTCCGATCATCG 233
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 196 GGAGATCTGAAAGTTTTAATTTTTTGGATCGATTTCATCGTTATCATACTCCGATCATCA 255
Query 234 TTTCTTTTTAAGGGTTAATCCTAAATCGTTCATCTGGTTAGTTAAAGAGGTTTACCGAAA 293
||||| || ||||||||||| ||||||||||||| |||||||||||||||||||| ||||
Sbjct 256 TTTCTGTTCAAGGGTTAATCGTAAATCGTTCATCGGGTTAGTTAAAGAGGTTTACTGAAA 315
Query 294 GCAAAATACTTTCTTACTCTTTGTATGGAGTAAGAATGCCAGAGCTAAGAAGTGGAGCAC 353
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 316 GCAAAATACTTTCTTACTCTTTGTATGGAGTAAGAATGCCAGAGTTAAGAAGTGGAGCAC 375
Query 354 GTAGATTGAGACAACCTAGCCCTCAGGTAACTGGTCAGGCGGATAATATTGAACTTCCTC 413
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 376 GTAGATTGAGACAACCTAGCCCTCAGGTGACTGGTCAGGCGGATAATATTGAACTTCCTC 435
Query 414 CTCAGCCTGTAACAAGGAGAAGAGGTGGTGGTGGTAGAGGAAGGGGAAACGCTGCAGCCA 473
||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct 436 CTCAGCCTGTAACAAGGAGAAGAGGCGGTGGTGGTAGAGGAAGGGGAAA-----C-GCCA 489
Query 474 AAGGTGCTGCACCTCCAAGACCCA-CTGGTGGTGCCGGTAGGGGTCGAGGCATCAGGTTA 532
|||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||
Sbjct 490 AAGGTGCTGCACCTCCAAGA-CCAGCTGGTGGTGTCGGTAGGGGTCGAGGCATCAGATTA 548
Query 533 ATAGATTTAGAGGCAGAACCTTGTGAGGTTCGTCCAGCAGTAGGTGAACCTGCTTTTAAT 592
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 549 ATAGATTTAGAGGCAGAACCTTGTGAAGTTCGTCCAGCAGTAGGTGAACCTGCTTTTAAT 608
Query 593 CAAGTTGAAG-GAGTAGCTGATAAGGATATTGCTATGGAAGGTGGTAGCGCAGAGAAGAT 651
|||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 609 CAAGTTGAAGCG-GTAGCTGAAAAGGATATTGCTATGGAAGGTGGTAGCGCAGAGAAGGT 667
Query 652 AGTTGGTGTGGAAGAAGATTCTAGCACAGCTCCAGTCCCTGAAAGGGTACAAGTCGGAAA 711
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 668 AGTTGGTGTGGAAGAAGATTCTAGCACAGCTCCAGTCCCTGAAAGGGTACAAGTTGGAAA 727
Query 712 TTCTCCTGTATATAAGACTGAGAGGAAACTCGGTAAAGGAGGCTTTGGTCAAGTTTTTGT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 TTCTCCTGTATATAAGACTGAGAGGAAACTCGGTAAAGGAGGCTTTGGTCAAGTTTTTGT 787
Query 772 AGGTAGAAGGGTGAGTGGTGGCAGCGATAGAATTGGGGCCGATGCAATTGAGGTGGCCCT 831
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 788 TGGTAGAAGGGTGAGTGGTGGCAGCGATAGGATTGGGGCCGATGCAATTGAGGTGGCCCT 847
Query 832 GAAATTTGAGCATCGAAATAGCAAAGGCTGCAATTTTGGTCCCCCTTATGAGTGGCAAGT 891
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 848 GAAATTTGAGCATCGAAATAGCAAAGGATGCAATTTTGGTCCACCTTACGAGTGGCAAGT 907
Query 892 GTACAATACTCTCAATGGTTGCTATGGAGTTCCTGCGGTACATCATAAGGGTCGTCAAGG 951
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 908 GTACAATACCCTCAATGGTTGCTATGGAGTTCCTGCGGTACATCATAAGGGTCGTCAAGG 967
Query 952 AGATTTTTACATTCTTGTCATGGACATGCTTGGTCCAAGTCTCTGGGATGTTTGGAATTC 1011
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 968 AGATTTTTACATTCTTGTCATGGACATGCTTGGTCCGAGTCTCTGGGATGTTTGGAATTC 1027
Query 1012 TTCGGGGCAATCGATGTCTCCAAACATGGTAGCCTGCATTGCAGTTGAGTCCATATCTAT 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 TTCGGGGCAATCGATGTCTCCAAACATGGTAGCCTGCATTGCAGTTGAGTCCATATCTAT 1087
Query 1072 TCTTGAGAAACTTCATATGAAAGGGTTTGTCCACGGAGATGTGAAGCCGGAAAACTTTTT 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 TCTTGAGAAACTTCATATGAAAGGGTTTGTCCACGGAGATGTGAAGCCGGAAAACTTTTT 1147
Query 1132 ACTCGGTCAACCGGGAACAGCAGATGAGAAAAAACTCTACCTTATCGATCTTGGTCTGGC 1191
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 ACTCGGTCAACCAGGAACAGCAGATGAGAAAAAACTCTACCTTATCGATCTTGGTCTGGC 1207
Query 1192 ATCAAAATGGAAAG------AGTCAGGCCTGCATGTTGAATATGATCAAAGACCTGATGT 1245
||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct 1208 ATCTAAATGGAAAGATTCACACTCAGGCCAGCATGTTGAATATGATCAAAGACCTGATGT 1267
Query 1246 GTTCAGGGGAACGATAAGGTATGCAAGTGTTCATGCGCATCTAGGTCGAACTGGAAGTAG 1305
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1268 GTTCAGGGGAACGATAAGGTATGCAAGTGTTCATGCACACCTAGGTCGAACTGGAAGTAG 1327
Query 1306 GAGAGATGATCTGGAGTCGTTGGCTTATACTTTAGTTTTTCTCTTGAAGGGAAGATTGCC 1365
||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||
Sbjct 1328 GAGAGATGATCTGGAGTCGCTGGCTTATACTTTAATTTTTCTTTTGAAGGGAAGATTGCC 1387
Query 1366 ATGGCAAGGATATCAGGGTGACAACAAGAGCTTTCTTGTCTGCAAGAAAAAGATGTCAAC 1425
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1388 ATGGCAAGGATATCAGGGTGACAACAAGAGCTTTCTTGTTTGCAAGAAAAAGATGTCAAC 1447
Query 1426 GTCTCCTGAATTGATGTGCTGTTTTTGTCCACCCCCGTTTAAGCTATTCCTCGAGGCAGT 1485
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1448 TTCTCCTGAATTGATGTGCTGTTTTTGTCCACCCCCGTTTAAGCTCTTCCTCGAGGCAGT 1507
Query 1486 TACTAATATGAAGTTTGACGAAGAGCCCAACTATGCAAAGCTTATTTCGATTTTTGATTC 1545
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1508 TACAAACATGAAGTTTGACGAAGAGCCCAACTATGCAAAGCTTATTTCGATTTTTGATTC 1567
Query 1546 TCTTATTGAACCATGTGCACTATCTAGACCAATTAGAATTGATGGGGCTCTTAAGGTTGG 1605
||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1568 TCTTATTGAACAATGTGCACTATCTAGACCAATTAAAATTGATGGTGCTCTTAAGGTTGG 1627
Query 1606 GCAAAAACGAGGAAGATTGCTTCTTAATTTGGAAGAGGATGAACAGCCAAAGAAGAAAAT 1665
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1628 GCAAAAACGAGGAAGAATGCTTCTTAATTTGGATGAGGATGAACAGCCAAAGAAGAAAAT 1687
Query 1666 CAGAATTGGCAGTCCTGCTTGTCAGTGGATCTCAGTCTATAATGCTCGTCGTCCCATGAA 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1688 CAGAATTGGCAGTCCTGCTTGTCAGTGGATCTCAGTCTATAATGCTCGTCGTCCCATGAA 1747
Query 1726 ACAGAGATATCACTACAACGTTGCAGACTCAAGGCTGCACCAGCATGTACAGAAGGGTAA 1785
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1748 ACAGAGATATCACTACAACGTTGCAGACTCAAGGTTGCATCAGCATGTACAGAAGGGTAA 1807
Query 1786 TGAGGATGGCCTTTTAATTAGCTGTGTAGCATCAGCAGCTAATCTCTGGGCCCTCATAAT 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1808 TGAGGATGGCCTTTTAATTAGCTGTGTAGCATCAGCAGCTAATCTCTGGGCCCTCATAAT 1867
Query 1846 GGATGCCGGGACTGGATTCAGCTCTCAAGTTTATGAATTGTCGGCGGTCTTCCTTCACAA 1905
|||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 1868 GGATGCTGGGACTGGATTCACCTCTCAAGTTTATGAATTGTCAACTGTCTTCCTTCACAA 1927
Query 1906 GGACTGGATTATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGTGGAGA 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1928 GGACTGGATTATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGTTCAGA 1987
Query 1966 TAACGGGAGCTCGTTAGTTGTTATGTCAAAAGGAACGTCTTATACTCAGCAATCTTACAA 2025
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988 TAACGGGAACTCATTAGTTGTTATGTCAAAAGGAACGTCTTATACTCAGCAATCTTACAA 2047
Query 2026 AGTCAGCGACTCATTCCCTTTCAAGTGGATAAATAAGAAATGGAAAGAAGATTTTCATGT 2085
|||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2048 AGTCAGCGACTCTTTTCCTTTCAAGTGGATAAACAAGAAATGGAAAGAAGATTTCCATGT 2107
Query 2086 GACCTCCATGACAACTGCTGGGAATCGTTGGGGTGTAGTAATGTCGAGGAATTCTGGCTT 2145
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2108 AACCTCCATGACAACTGCTGGGAATCGTTGGGGTGTGGTAATGTCGAGGAATTCTGGCTA 2167
Query 2146 CTCTGATCAGGTCGTGGAGCTCGACTTTTTGTACCCAAGCGATGGAATACATAGGAGGTG 2205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2168 CTCTGATCAGGTCGTGGAGCTCGACTTTTTGTACCCAAGCGATGGAATACATAGGAGGTG 2227
Query 2206 GGAAAGTGGGTATAGGATAACATCAATGGCAGCAACTGCAGATCAAGCAGCTTTCATATT 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2228 GGAAAGTGGGTATAGGATAACATCAATGGCAGCAACTGCAGATCAAGCAGCTTTCATATT 2287
Query 2266 AAGCGTACCAAAACGTAAAATGATGGATGAAACTCAAGAGACCCTTCGCACCACTGCCTT 2325
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2288 AAGCGTACCAAAACGTAAAATGATGGATGAAACTCAAGAGACTCTTCGCACCACCGCCTT 2347
Query 2326 TCCAAGCACTCATGTCAAGGAGAAATGGGCGAAAAATCTGTACATTGCATCAATATGCTT 2385
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2348 TCCAAGCACTCATGTCAAGGAAAAATGGGCGAAAAATCTGTACATTGCATCAATATGCTT 2407
Query 2386 TGGGAGGACAGTTTGCTGAGGTACTGAGCATCATATGTTCTGTTACAAAGCCAAAAAGAC 2445
||||||||||||||||||||||||| ||||||||||| | || ||||| |||||
Sbjct 2408 TGGGAGGACAGTTTGCTGAGGTACTTAGCATCATATG-------A-AA-GCCAAGAAGAC 2458
Query 2446 AATTGGAGGATAAGGATCATAATACGATCAAAAAGGTGAAAACCAGACGCAACCTGTTTG 2505
||||||||||||||||||||||||||||||| ||||| || | | | ||||||||||
Sbjct 2459 AATTGGAGGATAAGGATCATAATACGATCAAGAAGGT-AA--C--G-C--AACCTGTTTG 2510
Query 2506 TTAAATGTAATGAAATGGATGCGTCTTCGTATGTATGTAGAAGTATGAAAAG-ATAGAAA 2564
|||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 2511 TTAAATGTAATGAAATGGATGCGTGTTCGTATGTATGTAGAAGTAT-AAAAGGATAGAAA 2569
Query 2565 TGATGGTAACAGAGAA-TTGGATTAGC---AATAGAAAGTTTTGAGGGCTTTTTAAGCCT 2620
||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 2570 AGATGGTAACAGAGAAGTTGAATTAGTTTTAATAGAAAGTTTTGAGGGCTTTTTAAGCCT 2629
Query 2621 TCAAGTGTGCTT 2632
||||||||||||
Sbjct 2630 TCAAGTGTGCTT 2641
> AT3G03940.1 | Symbols: | Protein kinase family protein | chr3:1014025-1019224
REVERSE LENGTH=2862
Length=2862
Score = 2314 bits (1253), Expect = 0.0
Identities = 1887/2187 (86%), Gaps = 68/2187 (3%)
Strand=Plus/Plus
Query 266 TCTGGTTAGT-TAAAGAGGTTTACCGAAAGCAA-AATACTTTCTTAC-TCTTTGTATGGA 322
|||||||| | |||||||| | |||||||| || || || || |||| | |||| |||||
Sbjct 309 TCTGGTTAATCTAAAGAGG-TGACCGAAAG-AAGAAAAC-TT-TTACGT-TTTGCATGGA 363
Query 323 GTAAGAATGCCAGAGCTAAGAAGTGGAGC-A--CG-T--AGA----TTGA-GA-CAACCT 370
||||||||||||||| ||||||||||||| | | | ||| |||| || || |||
Sbjct 364 GTAAGAATGCCAGAGTTAAGAAGTGGAGCAAGGAGATCGAGACGCCTTGACGAGCAGCCT 423
Query 371 AGCCCTCAGGTAACTGGTCAGGCGGATAATATTGAACTTCCTCCTCAGCCTGTAACAAGG 430
| ||||| | || || || || || ||||| | ||||||||||||| ||| |||||||
Sbjct 424 AACCCTCCGCTAGTTGAACAAGCAGAAAATATCGTACTTCCTCCTCAGACTGCAACAAGG 483
Query 431 AGAAGAGGTGGTGGTGGTAGAGGAAGGGGAAACGCTGC---AGCCAAAGGTGCTGCACCT 487
|||||| |||||||||||||||||||| || ||||| ||| |||||||| ||||||
Sbjct 484 AGAAGA---GGTGGTGGTAGAGGAAGGGGGAATGCTGCTTTAGCTAAAGGTGCGGCACCT 540
Query 488 CCAAGACCCACTGGTGGTGCCGGTAGGGGTC-GAGGCATCAGGTTAATAGATTTAGAGGC 546
|||||||| || || |||||||||||| | | || |||||||| | ||| |||||| |
Sbjct 541 CCAAGACCAAC---TGCTGCCGGTAGGGG-CAGGGGTATCAGGTTGACAGACTTAGAGCC 596
Query 547 AGAACCTTGTGAGGTTCGTCCA---GCA---G---TA--GG----TGAACCTGCTTTTAA 591
|||||||||||||||||||||| ||| | || || ||||||||| || ||
Sbjct 597 AGAACCTTGTGAGGTTCGTCCAGCTGCAGGTGCTATAGGGGCCACTGAACCTGCCTTAAA 656
Query 592 TCAAGTTGAAGGAGTAGCTGATAAGGATATTGCTATGGAAGGTGGTAGCGCAGAG-AAGA 650
|| ||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||
Sbjct 657 TCGAGTTGAAGGGGTAGCTGATAAGGATATTGCTGCGGAAGGCGGTAGCGCAGAGAAAG- 715
Query 651 TAGTTGGTGTGGAAGAAGATTCTAGCACAGCTCCAGTCCCTGAAAGGGTACAAGTCGGAA 710
|||| || ||||||||||||| |||| | |||||||||||| ||||||||||| ||||
Sbjct 716 TAGTAGGCATGGAAGAAGATTCCAGCATGGGTCCAGTCCCTGAGAGGGTACAAGTTGGAA 775
Query 711 ATTCTCCTGTATATAAGACTGAGAGGAAACTCGGTAAAGGAGGCTTTGGTCAAGTTTTTG 770
|||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||| ||
Sbjct 776 ATTCTCCTGTTTATAAGACGGAGAGGAAACTTGGTAAAGGTGGCTTTGGTCAAGTTTATG 835
Query 771 TAGGTAGAAGGGTGAGTGGTGGCAGCGATAGAATTGGGGCCGATGCAATTGAGGTGGCCC 830
| || |||||||||||||||||||| ||||| ||||| || |||||||||||||| || |
Sbjct 836 TTGGCAGAAGGGTGAGTGGTGGCAGTGATAGGATTGGAGCAGATGCAATTGAGGTAGCTC 895
Query 831 TGAAATTTGAGCATCGAAATAGCAAAGGCTGCAATTTTGGTCCC-CCTTATGAGTGGCAA 889
| ||| |||| ||||| ||||| |||||||| || ||||| ||| ||||| |||||||||
Sbjct 896 TAAAACTTGAACATCGCAATAGTAAAGGCTGTAACTTTGG-CCCACCTTACGAGTGGCAA 954
Query 890 GTGTACAATACTCTCAATGGTTGCTATGGAGTTCCTGCGGTACATCATAAGGGTCGTCAA 949
||||||||||| |||||| | || |||||| ||||||| |||||||||||||||||||||
Sbjct 955 GTGTACAATACGCTCAATAGCTGTTATGGAATTCCTGCTGTACATCATAAGGGTCGTCAA 1014
Query 950 GGAGATTTTTACATTCTTGTCATGGACATGCTTGGTCCAAGTCTCTGGGATGTTTGGAAT 1009
||||||||||||||||| ||||||||||||||||| || || || |||||||||||||||
Sbjct 1015 GGAGATTTTTACATTCTGGTCATGGACATGCTTGGGCCTAGCCTTTGGGATGTTTGGAAT 1074
Query 1010 TCTTCGGGGCAATCGATGTCTCCAAACATGGTAGCCTGCATTGCAGTTGAGTCCATATCT 1069
|||| || |||||||||||||||||||||||||| ||||||||||| ||| | ||||||
Sbjct 1075 TCTTTGGCTCAATCGATGTCTCCAAACATGGTAGCATGCATTGCAGTGGAGGCGATATCT 1134
Query 1070 ATTCTTGAGAAACTTCATATGAAAGGGTTTGTCCACGGAGATGTGAAGCCGGAAAACTTT 1129
|||||||| ||||| |||||||| |||||||| || ||||||||||| || |||||||||
Sbjct 1135 ATTCTTGAAAAACTGCATATGAAGGGGTTTGTGCATGGAGATGTGAAACCAGAAAACTTT 1194
Query 1130 TTACTCGGTCAACCGGGAACAGCAGATGAGAAAAAACTCTACCTTATCGATCTTGGTCTG 1189
|| || ||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1195 TTGCTTGGTCAGCCTGGAACAGCAGACGAGAAGAAACTATACCTTATCGATCTTGGTCTA 1254
Query 1190 GCATCAAAATGGAAAGAGT--CA----GGCCTGCATGTTGAATATGATCAAAGACCTGAT 1243
||||||| ||||||||| | || |||| ||||||||||||||||||||| || |||
Sbjct 1255 GCATCAAGATGGAAAGATTCACACTCTGGCCAGCATGTTGAATATGATCAAAGGCCAGAT 1314
Query 1244 GTGTTCAGGGGAACGATAAGGTATGCAAG-TGTTCATGCGCATCTAGGTCGAACTGGAAG 1302
|| || || ||||| |||||||||||||| || ||||| ||||| ||||| || |||||
Sbjct 1315 GTATTTAGAGGAACAATAAGGTATGCAAGTTG-CCATGCACATCTTGGTCGTACAGGAAG 1373
Query 1303 TAGGAGAGATGATCTGGAGTCGTTGGCTTATACTTTAGTTTTTCTCTTGAAGGGAAGATT 1362
| |||| |||||||||||||| ||||||||||| ||| | ||||| || |||||| ||
Sbjct 1374 TCGGAGGGATGATCTGGAGTCATTGGCTTATACATTAATATTTCTGATGCGGGGAAGGTT 1433
Query 1363 GCCATGGCAAGGATATCAGGGTGACAACAAGAGCTTTCTTGTCTGCAAGAAAAAGATGTC 1422
||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1434 GCCATGGCAAGGATACCAGGGTGATAACAAGAGCTTTCTTGTTTGCAAGAAAAAGATGTC 1493
Query 1423 AACGTCTCCTGAATTGATGTGCTGTTTTTGTCCACCCCCGTTTAAGCTATTCCTCGAGGC 1482
||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct 1494 AACCTCTCCTGAATTGATGTGTTGTTTTTGTCCTCCCCCGTTTAAGCTGTTCCTCGAGGC 1553
Query 1483 AGTTACTAATATGAAGTTTGACGAAGAGCCCAACTATGCAAAGCTTATTTCGATTTTTGA 1542
|||||| |||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct 1554 AGTTACGAATATGAAGTTTGATGAGGAGCCCAACTATGCCAAGCTTATCTCGATTTTTGA 1613
Query 1543 TTCTCTTATTGAACCATGTGC-ACTATCTAGACCAATTAGAATTGATGGGGCTCTTAAGG 1601
| ||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 1614 TACTCTTATCGAGCCATGTGCTA-TATCTAGACCAATTAGAATTGATGGGGCTCTAAAGG 1672
Query 1602 TTGGGCAAAAACGAGGAAGATTGCTTCTTAATTTGGAAGAGGATGAACAGCCAAAGAAGA 1661
|||| ||||| ||||||||||||||| | ||||||||||||||||||||||||| |||||
Sbjct 1673 TTGGCCAAAAGCGAGGAAGATTGCTTATCAATTTGGAAGAGGATGAACAGCCAAGGAAGA 1732
Query 1662 AAATCAGAATTGGCAGTCCTGCTTGTCAGTGGATCTCAGTCTATAATGCTCGTCGTCCCA 1721
|||| ||||| ||||||||||| |||||||| |||||||||||||| || ||||| |
Sbjct 1733 AAATTAGAATCGGCAGTCCTGCCACACAGTGGATTTCAGTCTATAATGCACGCCGTCCTA 1792
Query 1722 TGAAACAGAGATATCACTACAACGTTGCAGACTCAAGGC-TGCACCAGCATGTACAGAAG 1780
|||||||||||||||| |||||||||||||||| ||| | |||| |||||||| ||||
Sbjct 1793 TGAAACAGAGATATCATTACAACGTTGCAGACTTAAGACTTGCA-CAGCATGTTGAGAAA 1851
Query 1781 GGTAATGAGGATGGCCTTTTAATTAGCTGTGTAGCATCAGCAGCTAATCTCTGGGCCCTC 1840
|||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||
Sbjct 1852 GGTAATGAGGATGGCCTTTTCATAAGCTGTGTAGCATCATCAGCTAATCTCTGGGCCATC 1911
Query 1841 ATAATGGATGCCGGGACTGGATTCAGCTCTCAAGTTTATGAATTGTCGGCGGTCTTCCTT 1900
|| |||||||| |||||||| ||||| ||||||||||||||| |||| | ||||||||
Sbjct 1912 ATCATGGATGCTGGGACTGGTTTCAGTTCTCAAGTTTATGAACTGTCCTCAGTCTTCCTG 1971
Query 1901 CACAAGGACTGGATTATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGT 1960
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 CACAAGGACTGGATCATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGT 2031
Query 1961 GGAGATAACGGGAGCTCGTTAGTTGTTATGTCAAAAGGAACGT-CTTATACTCAGCAATC 2019
| | |||| || |||||||| ||||||||| | |||||||| | ||||||| ||||||||
Sbjct 2032 GCAAATAATGGAAGCTCGTTGGTTGTTATGGCTAAAGGAAC-TCCTTATACCCAGCAATC 2090
Query 2020 TTACAAAGTCAGCGACTCATTCCCTTTCAAGTGGATAAATAAGAAA-TGGAAAGAAGATT 2078
||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||| ||
Sbjct 2091 TTACAAAGTCAGCGACTCATTTCCATTCAAGTGGATAAATAA-AAAGTGGAAAGAAGGTT 2149
Query 2079 TTCATGTGACCTCCATGACAACTGCTGGGAATCGTTGGGGTGTAGTAATGTCGAGGAATT 2138
||||||| || |||||||| || ||||||| ||||||||||||||||||||| ||||| |
Sbjct 2150 TTCATGTAACATCCATGACCACCGCTGGGAGTCGTTGGGGTGTAGTAATGTCCAGGAACT 2209
Query 2139 CTGGCTTCTCTGATCAGGTCGTGGAGCTCGACTTTTTGTACCCAAGCGATGGAATACATA 2198
| |||| |||||| ||||| |||||||| ||||| ||||||||||| || |||||||||
Sbjct 2210 CAGGCTACTCTGAACAGGTGGTGGAGCTTGACTTCTTGTACCCAAGTGAAGGAATACATC 2269
Query 2199 GGAGGTGGGAAAGTGGGTATAGGATAACATCAATGGCAGCAACTGCAGATCAAGCAGCT- 2257
| |||||||||||||| || ||||||||||||||||| ||||| || ||||||||||||
Sbjct 2270 GAAGGTGGGAAAGTGGATACAGGATAACATCAATGGCTGCAACAGCTGATCAAGCAGCTC 2329
Query 2258 TTCATATTAAGCGTACCAAAACGTAAAATGATGGATGAAACTCAAGAGACCCTTCGCACC 2317
|| ||||| || |||| ||||| ||||| | |||||||| |||||||| || || ||
Sbjct 2330 TT-ATATTGAGTATACCTAAACGAAAAATAACCGATGAAACCCAAGAGACTCTCCGGACT 2388
Query 2318 ACTGCCTTTCCAAGCACTCATGTCAAGGAGAAATGGGCGAAAAATCTGTACATTGCATCA 2377
||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2389 TCTGCCTTCCCAAGTACCCATGTCAAGGAGAAATGGGCGAAAAATCTGTACATTGCATCA 2448
Query 2378 ATATGCTTTGGGAGGACAGTTTGCTGA 2404
||||||| ||| ||||||||||||||
Sbjct 2449 ATATGCTATGGTCGGACAGTTTGCTGA 2475
> AT3G03930.1 | Symbols: | protein kinase-related | chr3:1011414-1012810
REVERSE LENGTH=888
Length=888
Score = 566 bits (306), Expect = 5e-160
Identities = 600/739 (81%), Gaps = 32/739 (4%)
Strand=Plus/Plus
Query 1678 TCCTGC-TTGTCAGTGGATCTCAGTCTATAATGCTCGTCGTCCCATGAAACAGAGATATC 1736
|||||| || || ||||| |||||||||| |||| ||| ||||||||||||| ||
Sbjct 141 TCCTGCGTT-CCAATGGATTTCAGTCTATACCAAACGTCCTCCTATGAAACAGAGATTTC 199
Query 1737 ACTACAACGTTGCAGACTCAAGGCTGCAC-CAGCATGTACAGAAGGGT-AATGAGGATGG 1794
|| ||||| ||||| | |||||| || | || |||| | | || ||| || | ||||||
Sbjct 200 ACCACAACATTGCAAATTCAAGGTTG-TCGCATCATGCAGAAAAAGGTAAAAG-GGATGG 257
Query 1795 CCTTTTAATTAGCTGTGTAGCATCAGCAGCTAATCTCTGGGCCCTCA-TAATGGATGCCG 1853
|||||| || |||||||||||||||| |||||||||||||| ||| | | |||||||| |
Sbjct 258 CCTTTTCATAAGCTGTGTAGCATCAGAAGCTAATCTCTGGG-CCTTAGTCATGGATGCTG 316
Query 1854 GGACTGGATTCAGC-TCTCAAGTTTATGAATTGTCGGCGGTCTTCCTTCACAAGGACTGG 1912
| ||||| |||| | |||||||||||| |||| || | |||||| | ||||||||||
Sbjct 317 GAACTGGTTTCA-CTTCTCAAGTTTATAAATTTTCTTCTACCTTCCTCCCCAAGGACTGG 375
Query 1913 ATTATGGAACAATGGGAAAAGAACTACTATATCAGTTCCATAGCTGGTGGAGATAACGGG 1972
|||||| |||||||||| ||||||||||||||||||||||||||||||| | |||| |||
Sbjct 376 ATTATGAAACAATGGGAGAAGAACTACTATATCAGTTCCATAGCTGGTGCAAATAATGGG 435
Query 1973 AGCTCGTTAGTTGTTATGTCAAAAGGAACGTC-TTATACTC-AGCAATCTTACAAAGTCA 2030
||||| || || ||||||||||||||||| || ||||| || ||||||| |||||| |
Sbjct 436 AGCTCATTGGTCGTTATGTCAAAAGGAAC-TCGTTATA-TCCAGCAATCATACAAAACCG 493
Query 2031 GCGACTCA-TTCCCTTTCAAGTGGATAAATAAGAAA-TGGAAAGAAGATTTTCATGTGAC 2088
| |||||| |||| || |||||||| |||| ||| |||||||||| ||||||||| ||
Sbjct 494 GTGACTCAATTCCATTA-AAGTGGATGGATAA-AAAGTGGAAAGAAGGTTTTCATGTAAC 551
Query 2089 CTCCATGACAACTGCTGGGAATCGTTGGGGTGTAGTAATGTCGAGGAATTCTGGCTTCTC 2148
|||||||| || | ||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct 552 ATCCATGACCACGGGTGGGAGCCGTTGGGGTGTAGTAATGTCCAGGAACTCAGGCTTCTC 611
Query 2149 TGATCAGGTCG-TGGAGCTCGACTTTTTGTACCCAAGCGATGGA-ATACATAGGAGGTGG 2206
||| ||||| | ||||| | ||||||||| ||||||| || | | ||| || | |||| |
Sbjct 612 TGAACAGGT-GATGGAGGTTGACTTTTTGAACCCAAGTGAAG-ATATAAATCGAAGGTTG 669
Query 2207 GAAAGTGGGTATAGGATAACATCAATGGCAGCAACTGCAGATCAAGCAGCT-TTCATATT 2265
|||||||| || | ||||||||||||||| ||||| || |||||||||||| || |||||
Sbjct 670 GAAAGTGGATACATGATAACATCAATGGCTGCAACAGCTGATCAAGCAGCTCTT-ATATT 728
Query 2266 AAGCGTACCAAAACGTAAAATGATGGATGAAACTC-AAGAGACCCTT-CGCACCACTGCC 2323
|| |||| | ||||||||| | ||||||| || ||||||| || ||||| || ||
Sbjct 729 GAGTATACCTAGACGTAAAATAACCGATGAAA-TCCAAGAGACT-TTACGCACTTCTTCC 786
Query 2324 TTTCCAAGCAC-TCATGTCAAGGAGAAATGGGCGAAAAATCTGTACATTGCATCAATATG 2382
|| || ||| | | |||||||||| ||||||| ||||||| ||| ||| ||||||||||
Sbjct 787 TTCCCTAGCTCCT-ATGTCAAGGACAAATGGGGGAAAAATATGTTCATAACATCAATATG 845
Query 2383 CTT-TGGGAGGACAGTTTG 2400
|| ||| ||||||||||
Sbjct 846 -TTATGGTCGGACAGTTTG 863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130684886515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5