BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488703 Length=432 Score E Sequences producing significant alignments: (Bits) Value AT5G18300.1 | Symbols: anac088, NAC088 | NAC domain containing ... 540 4e-153 > AT5G18300.1 | Symbols: anac088, NAC088 | NAC domain containing protein 88 | chr5:6057773-6058216 FORWARD LENGTH=444 Length=444 Score = 540 bits (292), Expect = 4e-153 Identities = 394/442 (89%), Gaps = 11/442 (2%) Strand=Plus/Plus Query 1 ATGTCGATGGTTGAAGAATTTTACGATGAAGAGGAAGAGC-TGGTTGGCTTTAGATTTAA 59 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 4 ATGCCGATGACTGAAGAATTTTACGATGAAGAGGAAGAGCTTGGTT-GCTTTAGATTTAA 62 Query 60 TCCTTCAGAAGAAGAACTCATACTCGACTATCTTCTACCTAAGCTTGGCTTCTACCAACC 119 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| Sbjct 63 TCCTTCAGAAGAAGAACTCATACTCGATTATCTTCTACCAAAGCTTGGCTTCCACCAACC 122 Query 120 AAAAACGATATATTTATTAGAAGACAAGGACGAGATCTACGCCAAAGTGCCGTGGCGGCT 179 ||| ||||||||||| |||||||||| |||| | ||||||||||||| |||||||||||| Sbjct 123 AAACACGATATATTTGTTAGAAGACAGGGACAACATCTACGCCAAAGAGCCGTGGCGGCT 182 Query 180 TAAACACACAGAGAATGGTATTTTTGAACCTAACGAGTGGTTTTACTTCGTGAAAAAGAC 239 ||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||||| ||| Sbjct 183 TAATCACACAGAGAATGATATCTTTGAACCTAACGAGTGGTTTTATTTCGTGAAAAGGAC 242 Query 240 AAACCGCAAAGTTAAAGGTTGGAAAGCCACTGGAGGGTTGAAAGATGTCTTGTCCaaaaa 299 ||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||| || || Sbjct 243 AAATCGCAAAGTTAAAGGTTGGAAAGCCACTGGAGAGTTAAAAGATGTCGTGTCGAAGAA 302 Query 300 aaaCGGTAAAGTGATTGGGAAGAAGAGAAATCGCAGTTTCTACGTTGAAGGTGA--AC-G 356 || |||| ||||||| ||||||||||| |||| ||| ||||||||||||||||| | | Sbjct 303 AACCGGTGAAGTGATCGGGAAGAAGAGGAATCTCAGGTTCTACGTTGAAGGTGATGAGAG 362 Query 357 ------GAGTGGTTGGACCATGACAGAGTATTCTTCCATCGGCAACCAAAACCAACTTCT 410 ||||||||||||||||| |||||||||||||| ||||| |||||||||| ||| Sbjct 363 CAAAACGAGTGGTTGGACCATGAGGGAGTATTCTTCCATTGGCAATCAAAACCAACGTCT 422 Query 411 CTGCCACCTCAAAGGACCGTGA 432 ||||||||| |||||||| ||| Sbjct 423 CTGCCACCTTAAAGGACCATGA 444 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20509241592 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5