BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488716
Length=4162
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18410.1 | Symbols: PIR, KLK, PIR121, SRA1, PIRP, ATSRA1 | t... 6709 0.0
AT5G18404.1 | Symbols: | unknown protein; Has 30201 Blast hits... 207 5e-52
> AT5G18410.1 | Symbols: PIR, KLK, PIR121, SRA1, PIRP, ATSRA1 |
transcription activators | chr5:6097298-6104980 REVERSE LENGTH=4133
Length=4133
Score = 6709 bits (3633), Expect = 0.0
Identities = 3978/4141 (96%), Gaps = 37/4141 (1%)
Strand=Plus/Plus
Query 31 GGTTCAGACAGAGTAGCAGCGAAATTCTCGATCTCTGTCCGTAAAGAATCAGAACAAAAG 90
||||| |||||||||| |||||| || ||||||||||||||||||||||||||| ||||
Sbjct 1 GGTTCGGACAGAGTAGTAGCGAATTTATCGATCTCTGTCCGTAAAGAATCAGAA-GAAAG 59
Query 91 CCGAATCAATCGGCTTGAAGTAGTAGAGCAGctctctcctctcctctcCATTGTGGTTGG 150
||||||||| | ||||||||||| ||||| ||||||||||||||||||||| |||||
Sbjct 60 GCGAATCAATTGACTTGAAGTAGT--AGCAG--CTCTCCTCTCCTCTCCATTGTTGTTGG 115
Query 151 GTAAGAAACACAATGGCAGTTCCTGTTGAGGAAGCAATTGCAGCTCTTTCCACATTCTCC 210
|| | || ||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct 116 GT--G--ACTCAATGGCGGTTCCTGTAGAGGAAGCAATCGCAGCTCTTTCCACATTCTCC 171
Query 211 TTAGAGGATGAGCAACCAGAAGTCCAAGGACCGGCTGTGATGGTTTCAGCTGAAAGAGCA 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 TTAGAGGATGAGCAACCAGAAGTCCAAGGACCGGCTGTGATGGTTTCAGCTGAAAGAGCA 231
Query 271 GCAACGGATAGTCCCATCGAGTATAGTGATGTTGCAGCATATCGTTTGTCTCTATCAGAA 330
||||| |||||||||||||| |||||||| || || ||||| || |||||||||||||||
Sbjct 232 GCAACCGATAGTCCCATCGAATATAGTGACGTCGCTGCATACCGGTTGTCTCTATCAGAA 291
Query 331 GACACAAAAGCTCTAAACCAGCTGAATACACTTATACAAGAAGGAAAAGAGATGGCGTCA 390
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 GACACAAAAGCTCTTAACCAGCTGAATACACTTATACAAGAAGGAAAAGAGATGGCGTCA 351
Query 391 ATTCTATACACATATAGAAGTTGTGTCAAAGCACTTCCTCAGCTTCCCGAATCTATGAAG 450
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 352 ATTCTATACACATATAGAAGTTGTGTCAAAGCACTGCCTCAGCTTCCCGAATCTATGAAG 411
Query 451 CATAGTCAAGCGGATTTGTATCTAGAAACATATCAAGTTTTGGACTTAGAAATGAGTCGT 510
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 412 CATAGTCAAGCGGATTTGTATCTAGAAACATATCAAGTTTTGGACTTAGAAATGAGCCGT 471
Query 511 TTACGCGAAATTCAGAGATGGCAATCGTCGGCTTCAGCTAAATTAGCTGCTGACATGCAG 570
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 TTACGCGAAATTCAAAGATGGCAATCGTCGGCTTCAGCTAAATTAGCTGCTGACATGCAG 531
Query 571 CGGTTTTCCAGACCTGAACGGCGCATCAATGGCCCCACAGTCACACATCTTTGGTCAATG 630
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 532 CGGTTTTCCAGACCTGAACGGCGGATCAATGGTCCCACAGTCACACATCTTTGGTCAATG 591
Query 631 CTAAAGTTGCTTGACGTCTTGGTTCAGCTGGATCATCTTAAAAATGCTAAAGCTAGTATT 690
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 592 CTAAAGTTGCTTGACGTCTTGGTTCAGCTGGATCATCTTAAAAATGCTAAAGCTAGCATT 651
Query 691 CCTAATGATTTCTCTTGGTATAAGAGAACATTCACTCAAGTCAGTGCGCAGTGGCAAGAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 CCTAATGATTTCTCTTGGTATAAGAGAACATTCACTCAAGTCAGTGCGCAGTGGCAAGAT 711
Query 751 ACAGATACAATGAGAGAAGAGTTAGATGACTTACAGATTTTCCTAAGCACAAGATGGGCT 810
|||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||
Sbjct 712 ACAGATACAATGAGAGAAGAGTTAGACGACTTGCAGATCTTCCTGAGCACAAGATGGGCT 771
Query 811 ATTTTACTCAACCTGCATGTTGAGATGTTCCGTGTAAACAATGTGGAAGATATTCTCCAA 870
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 ATTTTACTCAACCTGCACGTTGAGATGTTCCGTGTAAACAATGTGGAAGATATTCTCCAA 831
Query 871 GTTCTCATAGTCTTCATCGTTGAGTCTCTGGAGTTGGATTTTGCACTACTTTTTCCTGAG 930
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 832 GTTCTCATAGTCTTCATCGTGGAGTCTCTGGAGTTGGATTTTGCACTACTTTTTCCTGAG 891
Query 931 CGTTATATTCTTCTCCGAGTTTTACCTGTTCTTGTTGTCTTAGCAACACCATCTGAGAAA 990
|| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 892 CGGTATATTCTTCTCCGGGTTCTACCTGTTCTTGTTGTCTTAGCAACACCATCTGAGAAA 951
Query 991 GATACCGAGGCTTTATACAAGAGGGTAAAACTCAACAGATTGATAAACATTTTCAAGAAT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 GATACCGAGGCTTTATACAAGAGGGTAAAACTCAACAGATTGATAAACATTTTCAAGAAT 1011
Query 1051 GATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCCCCTGCTGCAATTTTGAAAGAG 1110
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1012 GATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAA 1071
Query 1111 TTGTCGGTATACTTTCAAAAGTTTTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCT 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 TTGTCGGTATACTTTCAAAAGTTTTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCT 1131
Query 1171 CATGAGCTCCCTCCACGCGAAGCTCTAGAATATCCTTTAAGATTTCCACTACACTATTTG 1230
||||||||||||||||| ||||| ||||||||| | || | |||||||||
Sbjct 1132 CATGAGCTCCCTCCACGTGAAGCGCTAGAATAT-C----AG------A-GGCACTATTTG 1179
Query 1231 ATAGTCAATCATATTGGAGCTCTCCGTGCCGAGCACGACGATTTTACAATCCGATTTGCT 1290
||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct 1180 ATAGTCAATCACATTGGAGCTCTCCGTGCTGAGCATGACGATTTCACAATCCGATTTGCT 1239
Query 1291 TCATCCATGAATCAGTTATTGCTGTTGAAGTCAAACGATGGAGCATATACTGAATGGTGC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 TCATCCATGAATCAGTTATTGCTGTTGAAGTCAAACGATGGAGCATATACTGAATGGTGC 1299
Query 1351 AGAGAGGTCAAAGGAAATATGTACGATATGGTTGTTGAAGGTTTCCAACTGTTAAGTAGA 1410
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 AGAGAGGTCAAAGGAAACATGTACGATATGGTTGTTGAAGGTTTCCAACTGTTAAGTAGA 1359
Query 1411 TGGACAGCACGCATTTGGGAGCAATGTGCTTGGAAATTCTCTCGCCCATGTAGGGATGCA 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 TGGACAGCACGCATTTGGGAGCAATGTGCTTGGAAATTCTCTCGCCCATGTAGGGATGCA 1419
Query 1471 GGAGAGACTCCGGAAGCCTCCGGATCATATTCTGATTACGAGAAGGTGGTGAGGTTCAAT 1530
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 GGAGAGACTCCTGAAGCCTCCGGATCATATTCTGATTACGAGAAGGTGGTGAGGTTCAAT 1479
Query 1531 TATACTGCAGAAGAAAGGAAAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGA 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 TATACTGCAGAAGAAAGGAAAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGA 1539
Query 1591 TCGATGCTGCAGCGCTGTGACACATTAGTTGCAGATGCTTTATGGGAGACAATACATGCC 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 TCGATGCTGCAGCGCTGTGACACATTAGTTGCAGATGCTTTATGGGAGACAATACATGCC 1599
Query 1651 GAAGTTCAAGATTTTGTACAGAACACGTTAGCCACAATGTTGCGTACCACCTTCCGAAAG 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1600 GAAGTTCAAGATTTTGTACAGAACACGTTAGCCACAATGTTGCGTACCACCTTCCGAAAG 1659
Query 1711 AAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCA 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1660 AAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCA 1719
Query 1771 AATACCAGGCCCGAACATGAGATGCCATCTTCACAACATGGAAATGATGAAAGCAGAGGG 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1720 AATACCAGGCCCGAACATGAGATGCCATCTTCACAACATGGAAATGATGAAAGCAGAGGG 1779
Query 1831 AATTTCTTTTATCCGAGGCCAGTTGCCCCAACAGCAGCACAGGTGCATTGCTTGCAGTTT 1890
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1780 AATTTCTTTTATCCGAGGCCTGTTGCCCCAACAGCAGCACAGGTGCATTGCTTGCAGTTT 1839
Query 1891 TTGATATATGAGGTTGTCTCTGGTGGAAATCTGAGGAGGCCAGGGGGATTCTTTGGAAAT 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 TTGATATATGAGGTTGTCTCTGGTGGAAATCTGAGGAGGCCAGGGGGATTCTTTGGAAAT 1899
Query 1951 AATGGCTCTGAGATTCCTGTTAATGACTTAAAGCAATTAGAAACGTTCTTCTACAAGCTC 2010
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct 1900 AATGGCTCTGAGATTCCTGTTAATGACTTAAAGCAATTAGAAACTTTTTTTTACAAGCTC 1959
Query 2011 AGCTTTTTCTTGCACATATTGGATTACTCGGCAAGTATTGGAATTTTGACTGATCTGGGG 2070
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1960 AGCTTTTTCTTGCACATATTGGACTACTCGGCAAGTATTGGAATATTGACTGATCTGGGG 2019
Query 2071 TTCCTCTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCGATTGAG 2130
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2020 TTCCTGTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCGATTGAG 2079
Query 2131 TGTTCACTACCATGGATGCTGATAGACTACATTCTGGAAGCTCAGAATTCAGGCCTTCTT 2190
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2080 TGTTCACTACCATGGATGCTGATAGACTACATTCTGGAAGCCCAGAATTCAGGCCTTCTT 2139
Query 2191 GAGAGTGTTCTGCTGCCTTTTGACATTTATAATGACTCAGCTCAACAAGCTCTGGTTGTT 2250
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2140 GAGAGTGTTCTGCTACCTTTTGACATTTATAATGACTCAGCTCAACAAGCTCTGGTTGTT 2199
Query 2251 CTGAGGCAGAGATTCCTCTATGATGAAATTGAAGCTGAGGTGGACCATGGTTTTGATATA 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 CTGAGGCAGAGATTCCTCTATGATGAAATTGAAGCTGAGGTGGACCATGGTTTTGATATA 2259
Query 2311 TTTGTTTCAAGGCTCTCGGAGTCTATATTCACATATTACAAGAGTTGGTCAGCAAGTGAG 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2260 TTTGTTTCAAGGCTCTCGGAGTCTATATTCACATATTACAAGAGTTGGTCAGCAAGTGAG 2319
Query 2371 CTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCT 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2320 CTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCT 2379
Query 2431 GTGAGATTTACTGCGTTATTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATCAAT 2490
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2380 GTGAGGTTTACTGCGTTATTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATTAAT 2439
Query 2491 TTAAGAAGTTTGATCTCTCAAAGGATGAATAAAATCTTTAGAGAGAATCTGGAGTTTCTT 2550
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2440 TTAAGAAGTTTGATCGCTCAAAGGATGAATAGAATCTTTAGAGAGAATCTGGAGTTTCTT 2499
Query 2551 TTTGACCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAATTGGAGAAACTGATAGAT 2610
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 2500 TTTGACCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAACTGGAGAAGCTGATAGAT 2559
Query 2611 ATCCTAAAGCACTCGCATGAATTGCTTTCACAAGATCTTTCCATAGATCCTTTCAGTCTC 2670
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2560 ATCCTAAAGCACTCGCATGAATTGCTTTCACAAGATCTTTCCATAGACCCTTTCAGTCTC 2619
Query 2671 ATGTTGAATGAAATGCAAGAAAATATATCTCTTGTCTCATTTTCAAGTCGACTTGCTACA 2730
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2620 ATGTTGAATGAAATGCAAGAAAACATATCTCTTGTCTCATTTTCAAGTCGACTTGCTACA 2679
Query 2731 CAGATTTGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATTCTTTGCAATACCACA 2790
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2680 CAGATTTGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATTCTTTGCAATACCACT 2739
Query 2791 CAACGATTTGTCCGTTCATCGAAAGTTCCTCCTACTCAGAAACCATCAGTGCCTTCTGCT 2850
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2740 CAGCGATTTGTCCGTTCATCGAAAGTTCCTCCTACTCAGAAACCATCAGTGCCTTCTGCT 2799
Query 2851 AAGCCTAGTTTCTATTGTGGCACTCAAGACTTAAATGCAGCGCATCAAAGTTTTGCACGA 2910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2800 AAGCCTAGTTTCTATTGTGGCACTCAAGACTTAAATGCAGCGCATCAAAGTTTTGCACGA 2859
Query 2911 TTGCATAGTGGATTTTTCGGGATACCACATTTATTTTCCATAGTTAAACTTCTTGGATCT 2970
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2860 TTGCATAGTGGATTTTTCGGGATACCACATTTATTTTCCATAGTTAAACTTCTTGGGTCC 2919
Query 2971 AGATCACTGCCTTGGCTTATAAGAGCTTTGCTGGACCATATATCAAATAAGATAACAACA 3030
|||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2920 AGATCATTGCCTTGGCTAATAAGAGCTTTACTGGACCATATATCAAATAAGATAACAACA 2979
Query 3031 CTTGAGCCAATGATCTCTGGATTGCAAGAAGCACTGCCCAAGTCTATTGGATTGCTTTCT 3090
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 2980 CTTGAGCCAATGATCTCTGGATTGCAAGAAGCATTGCCCAAGTCCATTGGATTGCTTTCT 3039
Query 3091 TTTGATGGTGGTGTTACAGGTTGTATGAAGCTTATACGAGAGCAACTAAACTGGGGCACT 3150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3040 TTTGATGGTGGTGTTACAGGTTGTATGAAGCTTATACGAGAGCAACTAAACTGGGGCACT 3099
Query 3151 AAGTCAGAACTCAAGTCAGAAGTTCTACGAGGAATAAAGGAAATTGGAAGTGTGATATAT 3210
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3100 AAGTCAGAACTCAAATCAGAAGTTCTACGAGGAATAAAGGAAATTGGAAGTGTGATATAT 3159
Query 3211 ACAATGGGACTTCTCGATATCGTATTGAGAGAG----GTCGACACAAAGCGTTTCATGCA 3266
||||||||||||||||||||||||||| | || || ||||||||||| ||||||||
Sbjct 3160 ACAATGGGACTTCTCGATATCGTATTG-GTCAGTCCTGTAGACACAAAGCGGTTCATGCA 3218
Query 3267 AACAGCTCCATGGTTGGGATTAATCCCGGGTGCTGAAGGACAGATAGTTAATGCTCAAGA 3326
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3219 AACAGCTCCATGGTTGGGATTAATCCCAGGTGCTGAAGGACAGATAGTTAATGCTCAAGA 3278
Query 3327 CGGTGAAAGCCCTCTTGTCAATCTCCTAAAGTCAGCAACTTCTGCAGTTGTGTCAAGTCC 3386
||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 3279 CGGCGAAAGCCCTCTTGTCAATCTCTTAAAGTCAGCAACTTCTGCAGTTGTATCAAGTCC 3338
Query 3387 TGGTTGTCTTAATCCAGCTGCATTCTACACCATGTCCAAACAGGCAGAAGCTGCAGATCT 3446
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 3339 AGGTTGTCTTAATCCAGCTGCGTTCTATACCATGTCCAAACAGGCAGAAGCTGCAGATCT 3398
Query 3447 ATTGTATAAGGCAAATATGAACGGTGGAAGCGTTCTTGAATACACACTTGCATTCACAAG 3506
||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct 3399 TTTGTACAAGGCAAACATGAACGGTGGGAGTGTTCTTGAATACACACTTGCATTCACAAG 3458
Query 3507 TGCGTCGCTCGACAAATATTGTAGTAAATGGAGTGCTCCTCCAAAGACGGGCTTCATTGA 3566
||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||
Sbjct 3459 TGCGTCGCTCGACAAATATTGCAGTAAATGGAGTGCTCCTCCAAAGACTGGCTTCGTTGA 3518
Query 3567 TATTACAACTTCAAAGGATTTTTACCGTATATACGGTGGTCTTCAGATTGGATATCTGGA 3626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3519 TATTACAACTTCAAAGGATTTTTACCGTATATACGGTGGTCTTCAGATTGGATATCTAGA 3578
Query 3627 GGAGATAACAGCTCCACAGTCAGCTCAACATGAAGTCCTCGGTGATTCGATTGCTTGGGG 3686
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3579 GGAGATAACAGCTCCACAGTCAGCTCAACATGAAGTCCTCGGTGATTCAATAGCTTGGGG 3638
Query 3687 TGGTTGCACCATTATTTACTTGCTCGGCCAGCAACTTCACTTTGAGTTGTTTGATTTCTC 3746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3639 TGGTTGCACCATTATTTACTTGCTCGGCCAGCAACTTCACTTTGAGTTGTTTGATTTCTC 3698
Query 3747 GTATCAAGTACTCAATGTCTCTGAGGTTGAAACTGTCTCTGCTTCACATACTCACAGGAA 3806
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 3699 GTACCAAGTACTCAATGTCTCTGAGGTTGAAACTGTCTCTGCTTCACATACCCATAGGAA 3758
Query 3807 TCCTCAAATCCATCAGGGGTGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGGAGGCT 3866
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3759 TCCACAAATCCATCAGGGATGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGGAGGCT 3818
Query 3867 GAACAACCATGTCTTCTCCATGCTTAAAGCTCGTTGTCCTCTTGAAGACAAAACGGCTTG 3926
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 3819 GAACAACCATGTCTTCTCCATGCTTAAAGCTCGTTGTCCTCTAGAAGACAAAACGGCATG 3878
Query 3927 TGCCATCAAACAGAGTGGCGCACCGCTGCCACGTGTCAGGTTTGAGAATACTGTGTCTGC 3986
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3879 TGCCATCAAACAGAGCGGCGCACCGCTGCCACGTGTCAGGTTTGAGAATACCGTGTCTGC 3938
Query 3987 TTTCGAGACTCTACCTCAGAAAGGTACCGTTGGCTGATGCAATTTGTACAAGAACCA-AC 4045
|||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |
Sbjct 3939 TTTCGAGACTCTACCTCAGAAAGGCACCGTTGGCTGATACAATTTGTACAATAACCAGAA 3998
Query 4046 CAGAGTGTTTATGCA-C-TAG-AACCAAAGTGTTTCCTTCTTTCTTGCTTAACAAGTGAC 4102
| || ||| | | | || ||||| ||| ||| ||||||| || ||||||| ||
Sbjct 3999 T-GTGTTTTTCTTCTTCATAATAACCA---TGTATCCACCTTTCTTTCTGAACAAGTAAC 4054
Query 4103 CTGGAAAATCGTTTGTATATCAATGGAGttttttttGT-TGTTACTTAAGATAAACGCAT 4161
|||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||
Sbjct 4055 CTGGAAAATCGTTTGTAT--CAATGGAGTTTTCTTTGTATGTTACCGAAGATAAACGCAT 4112
Query 4162 A 4162
|
Sbjct 4113 A 4113
> AT5G18404.1 | Symbols: | unknown protein; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6096149-6096406
FORWARD LENGTH=258
Length=258
Score = 207 bits (112), Expect = 5e-52
Identities = 156/176 (89%), Gaps = 7/176 (4%)
Strand=Plus/Minus
Query 3827 GGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTC-----GGAGGCTGAACAACCATGTCTT 3881
|||| ||||||||||||| |||||||||||||| || |||| ||||||||| ||||
Sbjct 201 GGGACGGTTTGTTGGAAGAGATGAAGAAAGCTCGATTGGGCGGCTAAACAACCATATCTT 142
Query 3882 CTCCATGCTTAAAGCTCGTTGTCCTCTTGAAGACAAAACGGCTTGTGCCATCAAACAGAG 3941
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 141 CTCCATGCTTAAAGCTCGTTGTCCTCTCGAAGACAAAACGGCTTGTGCCATCAAACAAAG 82
Query 3942 TGGCGCACCGCTGCCACGTGTCAGGTTTGAGAAT-ACTGTGTCTGCTTTCGAGACT 3996
|||||| |||| ||| | |||||||||||||| | |||||||||||||||||||
Sbjct 81 CCGCGCACTGCTGTCACATATCAGGTTTGAGAATGA-TGTGTCTGCTTTCGAGACT 27
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 207440309305
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5