BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488750
Length=1472
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18630.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1703 0.0
AT5G18640.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1389 0.0
> AT5G18630.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:6202633-6205737 FORWARD LENGTH=1585
Length=1585
Score = 1703 bits (922), Expect = 0.0
Identities = 1056/1122 (94%), Gaps = 3/1122 (0%)
Strand=Plus/Plus
Query 108 CTTTTGGTTGCTGAAATCTCTTTCGGGTTTTGTCCTAATCATCGTTAGTTTGGGTTTCGT 167
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 140 CTTTTGGTTGCTGAAATCTCTTTCGGGTTTTGTCCTAATCCTCATTAGTTTGGGTTTCGT 199
Query 168 GAGTCTCGTATTACAAGAACATGGGACAAAAGAGATGGTTCCTCTTGCTGGCAATTTTTG 227
||||||||| ||| |||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct 200 GAGTCTCGTTTTATAAGAACATGGGACAAAAGAGATTGTTGTTCTTGCTGGCAGTTTTTA 259
Query 228 CTTGTCTTCTTTCCTTTTCATGTGGTAGAGGTGTTCTCAAGTTGAAAAGCGATGATGATC 287
||| |||| |||| | ||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 260 CTTTTCTTGTTTCATCTTCATATGGTAGAGGTGTTCTCAAGTTGAAGAGCGATGATGATC 319
Query 288 GACCTGTTTACAACCATACGCTTGCCATAACACTTGTGGAGTATGCTTCTGCGGTTTATG 347
|||||||||||||||||||||||||| | || |||||||||||||| |||||||| ||||
Sbjct 320 GACCTGTTTACAACCATACGCTTGCCGTCACGCTTGTGGAGTATGCCTCTGCGGTCTATG 379
Query 348 AGTCGGATTTGACAAAACTCTTCACTTGGACTTGCGAAAGATGCAATGGTTTTACAAAGG 407
|||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 380 AGTCTGATTTGACAAAACTCTTCACTTGGACGTGCGAAAGATGCAATGGTTTGACAAAGG 439
Query 408 ATTTCGAAGTAATAGAGATCATATTTGACGTTGAACACTGCTTACAGGCGTATGTTGGGG 467
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 ATTTCGAAGTAATAGAGGTCATATTTGACGTTGAACACTGCTTACAGGCGTATGTTGGGG 499
Query 468 TGGCTGAGGATTTGAATGCTATCATTATTGCATTTCGGGGAACTCAAGAACACAGCATAC 527
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 500 TGGCTAAGGATTTGAATGCTATCATTATTGCATTTCGGGGAACTCAAGAACACAGCATAC 559
Query 528 AAAATTGGGTCTCAGACTTGTTCTGGAAACAGCTCGATCTGAATTACCCTGATATGCCAG 587
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 560 AAAATTGGGTCTCAGACTTGTTCTGGAAACAGCTCGATCTGAATTACCCTGACATGCCAG 619
Query 588 ATGCAATGGTGCACCATGGCTTTTATAGTGCTTATCACAATACAACTGTACGTCCTGCAG 647
||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |
Sbjct 620 ATGCAATGGTGCACCATGGCTTTTACAGTGCTTATCACAATACAACTTTACGGCCTGCGG 679
Query 648 TTTTGGATGCAATAACACGAGCGAAACAAGTCTATGGGACGAACATCAACATCATTGTCA 707
||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| || |
Sbjct 680 TTTTGGATGCAATAACACGAGTGAAAAAAGTCTACGGGGCGAACATCAACATCATAGTGA 739
Query 708 CTGGTCATTCAATGGGAGGAGCCATGGCTTCCTTTTGTGGGCTAGACTTAGTCGTAAATG 767
| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||
Sbjct 740 CCGGTCATTCAATGGGAGGAGCCATGGCTTCCTTTTGTGGTCTAGACCTAGTTGTAAATG 799
Query 768 AAGGAGAAGAAAACGTACAGGTTATGACATTTGGGCAACCTCGTGTTGGGAATGCCGCTT 827
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 AAGGTGAAGAAAACGTACAGGTTATGACATTTGGGCAACCTCGTGTTGGGAATGCCGCTT 859
Query 828 TTGCATCTTATTACAGTTTGCTTGTGCCTAATACCTTCAGAATCACGCATGACCGTGATA 887
|||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 860 TTGCATCTTATTACAGTTTGCTTGTGCCCAATACCTTCCGGATCACGCATGACCGTGATA 919
Query 888 TGGTTCCCCATCTGCCTCCTTACTATTACCATTTCCCTCAAAAAACATACCACCACTTCC 947
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 TGGTTCCTCATCTGCCTCCTTACTATTACCATTTCCCTCAAAAAACATACCACCACTTCC 979
Query 948 CAACAGAGGTGTGGGTTAAAGAATTCAGTTTTTCGAACTTTGTTCTTTTTGGTTTGGAGA 1007
|||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 980 CAACAGAGGTGTGGGTGAAAGATTTCAGTTTTTCGAATTTTGTTCTTTTTGGTTTGGAGA 1039
Query 1008 AAGTTTGTGACAACACCGGTGAAGATCCTACTTGCAGCAGATCGGTGAGGGGAACTAGCA 1067
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1040 AAGTTTGTGACAACACTGGTGAAGATCCTACTTGCAGCAGATCGGTAAGGGGAAATAGCA 1099
Query 1068 TTTCTGACCATTTAAGGTACTTTGGGGTGGAGTTGATGTGTGAGAGTTGGAGACAATGCA 1127
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||
Sbjct 1100 TTTCTGACCATTTAAGGTACTTTGGGGTAGAGTTGAAGTGTGAGAGTTGGAGACAGTGCA 1159
Query 1128 GCATAGTGATGAACCAGGAGATGGAGCGTTACAGCAGGAAAGATTCAAAGGGTAACATAT 1187
||||||||||||| || || |||||||||||||||||||||||||||| ||||||| |||
Sbjct 1160 GCATAGTGATGAATCAAGATATGGAGCGTTACAGCAGGAAAGATTCAAGGGGTAACTTAT 1219
Query 1188 TCCTGTCGCGGACAGTTCCTTCC-AAGTACGCAATCGAAAAC 1228
|||| ||||||||||||||| || ||| ||| | || |||||
Sbjct 1220 TCCTCTCGCGGACAGTTCCT-CCTAAGGACGTAGTC-AAAAC 1259
Score = 126 bits (68), Expect = 5e-28
Identities = 89/98 (91%), Gaps = 5/98 (5%)
Strand=Plus/Plus
Query 14 atat-at-atatataAG-TCGCCGTATAATTTTCTTGCCGGGAATAATCTCCGATCATCG 70
|||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 ATATAATAATATATAAGCTCGCCGTATAATTTTCTTGCCGGGAATAATCTCCGATCATCG 68
Query 71 CCGGAAATTTCC-AACTCGTTGTAAAAGACGTTCAATT 107
||||||||||| || | ||||||||||| || |||||
Sbjct 69 TCGGAAATTTCCGAATT-GTTGTAAAAGAAGTCCAATT 105
> AT5G18640.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:6212802-6215782 FORWARD LENGTH=1724
Length=1724
Score = 1389 bits (752), Expect = 0.0
Identities = 1005/1125 (89%), Gaps = 25/1125 (2%)
Strand=Plus/Plus
Query 115 TTGCTGAAATCTCTT-TCGGGTTTTGTC-CTAATCA-TCGTTAGTTTGGGTTTCGTGAGT 171
||||| ||||||||| | || ||||| | || || | | |||||||||||||||||||||
Sbjct 289 TTGCTAAAATCTCTTGT-GGCTTTTG-CTCTGAT-ACTTGTTAGTTTGGGTTTCGTGAGT 345
Query 172 CTCG-TATTA-CAAGAACATGGGACAAAAGAGATGGTTCCTCTTGCTGGCAATTTTTGCT 229
|||| | ||| ||| | ||||||||||||||||||||| ||||| |||||||||||| |
Sbjct 346 CTCGCT-TTATAAAGGATATGGGACAAAAGAGATGGTTCTTCTTGTTGGCAATTTTTGTT 404
Query 230 TGTCTTCTTTCCTTTTCATGTGGTAGAGGTGTTCTCAAGTTGAAAAGCGATGATGATCGA 289
|||||| |||| | ||||||||||||| ||||||||||| || |||||||||| ||||
Sbjct 405 TGTCTTGTTTCATCTTCATGTGGTAGA---GTTCTCAAGTTTAAGAGCGATGATGGTCGA 461
Query 290 CCTGTTTACAACCATACGCTTGCCATAACACTTGTGGAGTATGCTTCTGCGGTTTATGA- 348
||||| ||||| |||||||||||||| ||||||||||||||| |||||||||| ||| |
Sbjct 462 CCTGTGTACAATCATACGCTTGCCATCACACTTGTGGAGTATACTTCTGCGGTCTAT-AT 520
Query 349 GTCGGATTTGACAAAACTCTTCACTTGGACTTGCGAAAGATGCAATGGTTTTACAAAGGA 408
||| |||||| || |||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 521 GTCTGATTTGTCAGAACTCTTCACTTGGACATGCGAAAGATGCAATGGTTTGACAAAGGG 580
Query 409 TTTCGAAGTAATAGAGATCATATTTGACGTTGAACACTGCTTACAGGCGTATGTTGGGGT 468
||| || ||||||||||| ||| |||||||||| |||||||||||||| |||||||||||
Sbjct 581 TTTTGAGGTAATAGAGATAATAGTTGACGTTGAGCACTGCTTACAGGCATATGTTGGGGT 640
Query 469 GGCTGAGGATTTGAATGCTATCATTATTGCATTTCGGGGAACTCAAGAACACAGCATACA 528
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 GGCTAAGGATTTGAATGCTATCATTATTGCATTTCGGGGAACTCAAGAACACAGCATACA 700
Query 529 AAATTGGGTCTCAGACTTGTTCTGGAAACAGCTCGATCTGAATTACCCTGATATGCCAGA 588
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 701 AAATTGGGTCTCAGACTTGTTCTGGAAACAGCTCGATCTAAATTACCCTGATATGCCAGA 760
Query 589 TGCAATGGTGCACCATGGCTTTTATAGTGCTTATCACAATACAACTGTACGTCCTGCAGT 648
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 761 TGCAATGGTGCACCATGGCTTTTATAGTGCTTATCACAATACAACTGTACGGCCTGCAGT 820
Query 649 TTTGGATGCAATAACACGAGCGAAAC-AAGTC-TATGGGACGAACATCAACATCATTGTC 706
|||||||||| ||| |||||| ||| || || |||||| | ||| |||||||||| ||
Sbjct 821 TTTGGATGCAGTAAAACGAGC-AAAGGAA-TCCTATGGGGCCAACCTCAACATCATGGTG 878
Query 707 ACTGGTCATTCAATGGGAGGAGCCATGGCTTCCTTTTGTGGGCTAGACTTAGTCGTAAAT 766
|||||||||||||||||||||||||||||||||||||||| ||||||| |||| || |||
Sbjct 879 ACTGGTCATTCAATGGGAGGAGCCATGGCTTCCTTTTGTGCGCTAGACCTAGTTGTTAAT 938
Query 767 GAAGGAGAAGAAAACGTACAGGTTATGACATTTGGGCAACCTCGTGTTGGGAATGCCGCT 826
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 939 GAAGGAGAAGAAAACGTACAAGTTATGACATTTGGGCAACCTCGTGTTGGGAATGCTGCT 998
Query 827 TTTGCATCTTATTACAGTTTGCTTGTGCCTAATACCTTCAGAATCACGCATGACCGTGAT 886
||||||||||||| || |||||||||||||||||||||| | |||| |||||||||||
Sbjct 999 TTTGCATCTTATTTCAATTTGCTTGTGCCTAATACCTTCCGGATCATACATGACCGTGAC 1058
Query 887 ATGGTTCCCCATCTGCCTCCTTACTATTACCATTTCCCTCAAAAAACATACCACCACTTC 946
|| ||||| |||||||||||||||||| | | |||||||||||||||||| |||||||||
Sbjct 1059 ATAGTTCCTCATCTGCCTCCTTACTATCATCTTTTCCCTCAAAAAACATATCACCACTTC 1118
Query 947 CCAACAGAGGTGTGGGTTAA-AGAATTCAGT-TTTTCGAACT-TTGTTCTTTTTGGTTTG 1003
|| |||||||||||| || | |||| | ||| |||| ||| | ||||| | |||| ||
Sbjct 1119 CCCACAGAGGTGTGG-TTGACAGAACTAAGTATTTT-GAA-TATTGTTATCCGTGGTGTG 1175
Query 1004 GAGAAAGTTTGTGACAACACCGGTGAAGATCCTACTTGCAGCAGATCGGTGAGGGGAACT 1063
|| |||||||||||||||||||||||||||||||| |||||||||||||| | ||||| |
Sbjct 1176 GAAAAAGTTTGTGACAACACCGGTGAAGATCCTACATGCAGCAGATCGGTAATGGGAAAT 1235
Query 1064 AGCATTTCTGACCATTTAAGGTACTTTGGGGTGGAGTTGATGTGTGAGAGTTGGAGACAA 1123
||||| ||||||||||||| ||||||||| |||||||||||| |||||| |||||| |||
Sbjct 1236 AGCATATCTGACCATTTAACGTACTTTGGAGTGGAGTTGATGGGTGAGACTTGGAGGCAA 1295
Query 1124 TGCAGCATAGTGATGAACCAGGAGATGGAGCGTTACAGCAGGAAAGATTCAAAGGGTAAC 1183
|| | |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||
Sbjct 1296 TGTAACATAGTGATGGGCCATGAGATGGAGAGTTACAGTAGGAAAGATTCAAAGGGTAAC 1355
Query 1184 ATATTCCTGTCGCGGACAGTTCCTTCCAAGTACGCAATCGAAAAC 1228
|||||||| ||||||||||||||||||| | | | |||| |||||
Sbjct 1356 ATATTCCTTTCGCGGACAGTTCCTTCCACGGAGGTAATC-AAAAC 1399
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72589988070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5