BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488771 Length=1653 Score E Sequences producing significant alignments: (Bits) Value AT5G18840.1 | Symbols: | Major facilitator superfamily protein... 2412 0.0 AT2G48020.2 | Symbols: | Major facilitator superfamily protein... 117 4e-25 > AT5G18840.1 | Symbols: | Major facilitator superfamily protein | chr5:6282881-6286707 FORWARD LENGTH=1830 Length=1830 Score = 2412 bits (1306), Expect = 0.0 Identities = 1446/1514 (96%), Gaps = 7/1514 (0%) Strand=Plus/Plus Query 1 CTCTCTCTTTCCTTGCAAATTTTCTGCTCTCAAAGAGTAAAGAGTTGGAGAGAGAGAAGA 60 |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| || Sbjct 15 CTCTCTCTTTCCTTGCAAATTTTCAGCTCTCAAAGAGTTAAGAGTTAGAGAGAGAGAGGA 74 Query 61 TGGCAATTAGGGAAATCAAAGACGAAGAGAGGGGTGAGATAGT-ACATAAGGTAGAGGAG 119 |||| ||||||||||||||||| | |||||||||||| ||||| | |||||||||| | Sbjct 75 TGGCCATTAGGGAAATCAAAGATGTAGAGAGGGGTGAAATAGTGA-ATAAGGTAGA--A- 130 Query 120 GGTCTAGGGAAACCATTTTTGACTCATCAAGATGATGAAAAAGAGAGTGAGAATAATGAA 179 | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 131 GATCTTGGGAAACCATTTTTGACTCATGAAGATGATGAAAAAGAGAGTGAGAATAATGAA 190 Query 180 TCCTATTTGATGGTTCTCTTCAGCACTTTTGTTGCTGTCTGTGGCTCCTTTGAGTTTGGC 239 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 191 TCATATTTGATGGTTCTCTTCAGTACTTTTGTTGCTGTCTGTGGCTCCTTTGAGTTTGGC 250 Query 240 TCTTGTGTTGGATACTCAGCGCCTACTCAGTCATCTATAAGACAAGATCTCAATCTCTCC 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 251 TCTTGTGTTGGATACTCAGCGCCTACTCAGTCATCTATAAGACAAGATCTCAATCTCTCC 310 Query 300 CTTGCAGAGTTCTCAATGTTTGGATCCATCTTAACAATCGGTGCAATGCTTGGTGCTGTT 359 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 311 CTTGCAGAGTTCTCCATGTTTGGATCCATCTTAACTATCGGTGCAATGCTTGGTGCTGTT 370 Query 360 ATGAGTGGGAAAATTTCAGATTTTTCCGGCCGAAAAGGGGCTATGAGAACGTCAGCTTGC 419 ||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct 371 ATGAGTGGGAAAATTTCAGATTTCTCCGGCCGAAAAGGGGCAATGAGGACATCAGCTTGC 430 Query 420 TTCTGCATTACAGGTTGGCTCGCTGTCTTCTTCTCCAAGGGTGCATTGTTACTTGATGTA 479 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 431 TTCTGCATTACAGGTTGGCTCGCTGTCTTCTTCACCAAGGGGGCATTGTTACTTGATGTA 490 Query 480 GGAAGGTTCTTTACAGGATTTGGAATTGGAGTTTTTTCTTATGTGGTCCCTGTGTACATT 539 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 491 GGAAGGTTCTTTACAGGATATGGAATTGGAGTTTTTTCTTATGTGGTCCCTGTGTACATT 550 Query 540 GCTGAGATATCTCCCAAGAATCTCCGAGGTGGACTCACAACACTGAACCAACTCATGATT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 551 GCTGAGATATCTCCCAAGAATCTCCGAGGTGGACTCACAACACTGAACCAACTCATGATT 610 Query 600 GTGATCGGCTCATCGGTTTCTTTCTTGATCGGATCTCTCATTTCTTGGAAAACTCTTGCC 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611 GTGATCGGCTCATCGGTTTCTTTCTTGATCGGATCTCTCATTTCTTGGAAAACTCTTGCC 670 Query 660 CTAACCGGACTTGCTCCCTGCATTGTTTTGTTCTTTGGTTTGTGCTTCATACCTGAATCT 719 |||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| Sbjct 671 CTAACCGGACTTGCTCCCTGCATTGTTTTGCTCTTTGGCTTGTGCTTCATACCCGAATCT 730 Query 720 CCTCGATGGCTGGCAAAAGCAGGCCGTGAGAAAGAGTTTCGCTTAGCCCTGCAAAAGCTA 779 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 731 CCTCGATGGCTGGCAAAAGCAGGCCATGAGAAAGAGTTTCGCGTAGCCCTGCAAAAGCTG 790 Query 780 CGAGGAAAAGATGCAGATATCACAAATGAAGCAGAAGGTATTCAAGTCTCGATTCAAGCT 839 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 791 CGAGGAAAAGATGCAGATATCACAAATGAAGCAGACGGTATTCAAGTCTCGATTCAAGCT 850 Query 840 CTAGAGATTCTCCCACAAGCAAGAATTCAAGATCTTGTGTCCAAGAAATATGCTCGATCT 899 ||||||||||| ||| |||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct 851 CTAGAGATTCTTCCAAAAGCAAGAATCCAAGACCTTGTGTCCAAGAAATATGGTCGATCT 910 Query 900 GTCATTATTGGTGTTTCCCTGATGGTATTCCAACAGTTTGTTGGAATCAATGGGATCGGA 959 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 911 GTCATCATTGGTGTTTCCCTGATGGTATTCCAACAGTTTGTTGGAATCAATGGGATCGGA 970 Query 960 TTCTACGCAAGCGAAACGTTTGTAAAAGCCGGATTTTCGTCTGGGAAACTCGGAACAATC 1019 ||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||| Sbjct 971 TTCTACGCAAGTGAAACGTTTGTAAAAGCCGGATTTACCTCTGGGAAACTAGGAACAATC 1030 Query 1020 GCAATCGCTTGTATTCAGGTTCCCATAACTGTTCTTGGGACAATCTTGATAGATAAATCT 1079 || ||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct 1031 GCTATCGCTTGTGTTCAGGTGCCAATAACTGTTCTTGGAACAATCTTGATAGATAAATCT 1090 Query 1080 GGACGAAGACCACTAATTATGATTTCAGCTGGTGGTATCTTCTTGGGGTGTATTCTCACA 1139 |||||||| |||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 1091 GGACGAAGGCCACTAATTATGATTTCAGCTGGTGGTATCTTCTTGGGATGCATACTCACA 1150 Query 1140 GGCACATCTTTCTTACTCAAGGGACAAAGCTTGTTGCTTGAATGGGTACCTACCTTAGCA 1199 |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| Sbjct 1151 GGCACATCTTTCTTACTCAAGGGACAGAGCTTGTTGCTTGAATGGGTCCCTTCCTTAGCC 1210 Query 1200 GTTGGAGGTGTACTTATCTATGTAGCTGCTTTCTCTATCGGAATGGGACCTGTTCCTTGG 1259 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1211 GTTGGAGGTGTACTTATCTATGTAGCTGCTTTCTCCATCGGAATGGGACCTGTTCCTTGG 1270 Query 1260 GTGATAATGTCTGAGATATTTCCGATAAACATTAAGGGGATCGCAGGAAGCTTAGTGGTA 1319 |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct 1271 GTGATAATGTCTGAGATATTTCCGATAAACGTAAAGGGAATCGCAGGAAGCTTAGTGGTA 1330 Query 1320 CTAGTGAATTGGTCCGGTGCTTGGGCTGTTTCTTACACTTTCAACTTCCTCATGAGCTGG 1379 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1331 CTAGTGAATTGGTCTGGTGCTTGGGCTGTTTCTTACACTTTCAACTTCCTCATGAGCTGG 1390 Query 1380 AGCTCTCCAGGTACATTCTATATT-TACTCTGCTTTTGCAGCCGCAACGATAATCTTTGT 1438 ||||||||||||||||||||| || ||||| ||||||||||| || |||||||| ||||| Sbjct 1391 AGCTCTCCAGGTACATTCTAT-TTGTACTCGGCTTTTGCAGCTGCGACGATAATATTTGT 1449 Query 1439 GGCGAAGATGGTGCCAGAGACGAAAGGGAAGACACTGGAAGAGATCCAAGCTTGTATTCG 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1450 GGCGAAGATGGTGCCAGAGACGAAAGGGAAGACACTGGAAGAGATCCAAGCTTGTATTCG 1509 Query 1499 AAGAGAAACATAAG 1512 |||||||||||||| Sbjct 1510 AAGAGAAACATAAG 1523 > AT2G48020.2 | Symbols: | Major facilitator superfamily protein | chr2:19644255-19647180 FORWARD LENGTH=1751 Length=1751 Score = 117 bits (63), Expect = 4e-25 Identities = 120/148 (81%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 1239 GGAATGGGACCTGTTCCTTGGGTGATAATGTCTGAGATATTTCCGATAAACATTAAGGGG 1298 ||||||||| | | || |||||| | ||||||||||||||||| ||||||| ||| || Sbjct 1312 GGAATGGGAGCAATGCCGTGGGTGGTCATGTCTGAGATATTTCCCATAAACA-TAAAAGG 1370 Query 1299 A-TCGCAGGAAGCTTAGTGGTACTAGTGAATTGGTCCGGTGCTTGGGCTGTTTCTTACAC 1357 | | |||||| || | | | || ||||| |||| || || ||||||||||||||||| Sbjct 1371 AGTAGCAGGAGGCATGGCGACGCTGGTGAACTGGTTTGGAGCGTGGGCTGTTTCTTACAC 1430 Query 1358 TTTCAACTTCCTCATGAGCTGGAGCTCT 1385 |||||||||||||||| |||||||||| Sbjct 1431 TTTCAACTTCCTCATGTCCTGGAGCTCT 1458 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81676286715 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5