BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488782
Length=2753
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18980.1 | Symbols: | ARM repeat superfamily protein | chr5... 4375 0.0
AT3G06210.1 | Symbols: | ARM repeat superfamily protein | chr3... 1967 0.0
> AT5G18980.1 | Symbols: | ARM repeat superfamily protein | chr5:6334832-6338100
REVERSE LENGTH=2777
Length=2777
Score = 4375 bits (2369), Expect = 0.0
Identities = 2646/2778 (95%), Gaps = 26/2778 (1%)
Strand=Plus/Plus
Query 1 AAACTCACGCTTTACTCGTTTTCTCTGCATCATCAACAACTCCTCAAGTCATTACGCACT 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAAATCACGCTTTACTCGTTTTCTCTGCATCATCAACAACTCCTCAAGTCATTACGCACT 60
Query 61 ATTCAAAAAC-------------AA-AAAG-T-G-AAAA--G---TTTTCGATTGCGATT 98
|||||||||| || |||| | | |||| | ||||||||| || ||
Sbjct 61 ATTCAAAAACTAAAAAAGAAAGAAAGAAAGATCGAAAAAGTGAAATTTTCGATTACGGTT 120
Query 99 TGAGTCGGAAACGAGTGAACACAACGAAAGGTTTATAATGGATTCAAGAAAGTTCGAAGA 158
||||| |||||||||| |||||||| ||||||| | ||||||||||||||||||||||||
Sbjct 121 TGAGTAGGAAACGAGTAAACACAACAAAAGGTTCACAATGGATTCAAGAAAGTTCGAAGA 180
Query 159 AGACGAAGATCGAAGCATTCGTTTGCAGGTCTCTGAGCTTCAAAAATTGGAGGAAGCTAG 218
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 181 AGACGAAGATCGAAGCATTCGTTTACAGGTCTCGGAGCTTCAAAAATTGGAGGAAGCTAT 240
Query 219 AGGTTCAAACGACACCGTTTTCGATCTAAGAAGCAGCATTGAGAAAGTCGACAGCGGCGA 278
||| |||| |||||||||||| |||||||||||||| || ||||||| ||||||||||||
Sbjct 241 AGGCTCAACCGACACCGTTTTTGATCTAAGAAGCAGTATCGAGAAAGGCGACAGCGGCGA 300
Query 279 AACCGCAGACGCAGCTTCTGTTTCCTCCGCGACCGCGTTTCGTAGAAAATCAACAGTCCC 338
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AACCGCAGACGCAGCTTCTATTTCCTCCGCGACCGCGTTTCGTAGAAAATCAACAGTCCC 360
Query 339 AGCTCCGGAGAAGAAGCTAACGCTATTCGCTCTCCAACTCGCGATTCTTGAGAAAACCGC 398
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 361 AGCTCCGGAGAAGAAGCTAACGCTATTCGCTCTACAACTCGCGATTCTTGAGAAAACCGC 420
Query 399 CACCGGAATCGGAACCCTAGGGTTTATCTGGGCCACAGTGGTTCTTCTCGGCGGCTTCGC 458
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 421 CACTGGAATCGGAACCCTAGGGTTTATCTGGGCCACGGTGGTTCTTCTCGGCGGCTTCGC 480
Query 459 GATCACACTCGACGGTTCCGATTTCTGGTTTATCACCATCATTCTCCTAATCGAAGGTGC 518
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 481 AATCACACTCGACGGTTCCGATTTCTGGTTCATCACCATCATTCTCCTAATCGAAGGTGC 540
Query 519 TCGAATCTTCAGCAGAAGTCACGAGCTCGAGTGGCAACACCAAGCCACGTGGACCGTCGC 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCGAATCTTCAGCAGAAGTCACGAGCTCGAGTGGCAACACCAAGCCACGTGGACCGTCGC 600
Query 579 CGGCGTCGGAATCAGTAGCTTTCGCGCTCTCCGATCAAGTTCAGCCTCGCTTCTCAAGAA 638
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 601 CGGCGTCGGAATCAGTAGCTTTCGCGCTCTCCGATCAAGCTCAGCCTCGCTTTTCAAAAA 660
Query 639 TCTAAAACGAATCAGTGCTTCAATCTTCAAGCCACGATCGAGGGAAGCGACGGCAAGAGA 698
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 661 TCTAAAACGAATCAGTGATTCAATCTTCAAGCCACGATCGAGAGAAGCGACGGCAAGAGA 720
Query 699 CTGTGTCGTTCCAGAGACGACGTTAGAGACATGGAAGAACTCAGACGTACCTCTGCTTCC 758
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 721 CTGCGTCGTTCCAGAGACGACGTTAGAGACATGGAAGAACTCAGACGTACCTCTTCTTCC 780
Query 759 ATACGCGAGATGGTTCTTTATCTCCAGTACAGTGAGTCGTCTTCTTTACTGGCTCCAACT 818
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct 781 ATACGCGAGATGGTTCTTCATTTCCAGTACAGTGAGTCGTCTTCTTTACTGGCTCCAGCT 840
Query 819 TCTATCTGCAACGGCTTGTGTTGCTCTGTCTTCTTACAAGCTTGTCAGGCATAACTATGG 878
||| ||||| ||||||||||| ||||| ||||||||||||||| | ||||||||||||||
Sbjct 841 TCTCTCTGCCACGGCTTGTGTAGCTCTATCTTCTTACAAGCTTATTAGGCATAACTATGG 900
Query 879 AGATGTTCATAAAGGAGATACGGATAAGAGGAATAGACAGTCGGCTCTCAACATATTCTA 938
||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 901 AGATGTTCACAAAGGAGATACGGATAAGAGGAATAGACAGTCTGCTCTCAATATATTCTA 960
Query 939 CTCGCTCGCCTTTGCGGAGGCGTTGTTGTTTCTTGTGGAGAAAGTTTACTGGGAGTGGCA 998
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 961 CTCGCTCGCCTTTGCTGAGGCGTTGTTGTTTCTTGTGGAGAAAGTTTATTGGGAATGGCA 1020
Query 999 AGTCAGTGTTTGTAATTTGCTTGAGAATGTGACTAGAGAGTGTGAGTTTGGGGTTACTGG 1058
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1021 AGTCAGTGTTTGTAATTTGCTTGAGAATGTGACTAGAGAATGTGAGTTTGGGGTTAGTGG 1080
Query 1059 TTTGGTTTCGATCAAGAGGTTTTTCTATGATTCGTATTCCAAGTGTGTCAATGGGAGTAT 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 TTTGGTTTCGATCAAGAGGTTTTTCTATGATTCGTATTCCAAGTGTGTCAATGGGAGTAT 1140
Query 1119 ATTTGATGGTTTGAAGATGGATATAGTGAGCTTTGGTATGGAGCTCTTGGACTCGAACTC 1178
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1141 ATTTGATGGTTTGAAGATGGATATAGTGAGCTTTGGTATGGAGCTTTTGAACTCGAACTC 1200
Query 1179 TTCTGATGAACAGCTTATTGGAGTGAGGATTCTTAGGCAGTTTGCAGTGACTGAACGCTA 1238
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1201 TTCTGATGAACAGCTTATTGGAGTGAGGATTCTTAGGCAGTTTTCAGTGACTGAACGGTA 1260
Query 1239 CTCGGAGGATACACTTGAGAAGATCGGAATTAACTTTCCTGTTATTGAAAGGTTGGTGGA 1298
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1261 CTCGGAGGATACACTTGAGAAGATCGGAATCAACTTTCCCGTTATTGAAAGGTTGGTGGA 1320
Query 1299 GATGTTGAACTGGAAAGATCTCCAAGAGGAAGAGATTAGGAGATCAGCCGCTGAGATACT 1358
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GATGTTGAACTGGAAAGATCTGCAAGAGGAAGAGATTAGGAGATCAGCCGCTGAGATACT 1380
Query 1359 ATCGAAACTTGCTGGCAAAAAGCAGAACTCTTTAAGAGTTGCTGGTATTTCTGGTGCAAT 1418
||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct 1381 ATCGAAACTAGCTGGCAAAAAGCAGAATTCTTTGAGAGTCGCTGGGATTTCTGGTGCAAT 1440
Query 1419 GGAATCGATTTCATCGTTGTTAGAGAACACGAGATCATCAGGTGAAGCTCCTGATGAGAT 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGAATCGATTTCATCGTTGTTAGAGAACACGAGATCATCAGGTGAAGCTCCTGATGAGAT 1500
Query 1479 TGGAGAGAAAAAGGTGTTCCATGACCATAATCTACACTACGATTTCTGGAGATTCAACAA 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 TGGAGAGAAAAAGGTGTTCCATGACCATAATCTACACTACGATTTCTGGAGATTCAACAA 1560
Query 1539 TTTGGGCCTTCTAATTCTGAAGAAATTAGCCAAAGATCATGACAACTGTGGAAAACTCGG 1598
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1561 TTTGGGCCTTCTAATTCTGAAGAAATTAGCCAAGGATCATGACAACTGTGGAAAACTCGG 1620
Query 1599 CAACACGAGAGGTCTTCTCCCGAAGATAATTGATTTCACACACGCGGATGAAAATCTGTT 1658
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1621 CAACACGAGAGGTCTTCTTCCGAAAATAATTGATTTCACACACGCGGATGAAAATCTGTT 1680
Query 1659 GAGGGATGAGAATGCAGACATCGCGAGGTCATGTGTTCTGACACTGAAACGGTCACTTCA 1718
||||||||| || |||||||| ||||||||| | |||||||||||||||||||| || ||
Sbjct 1681 GAGGGATGAAAACGCAGACATAGCGAGGTCACGGGTTCTGACACTGAAACGGTCGCTACA 1740
Query 1719 GCTTGTGAAAATGTTAGCCAGCACAACAGGGAACACAGGGAAGTGCCTCCGGAGAGAGAT 1778
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 GCTGGTGAAAATGTTAGCCAGCACAACAGGGAACACAGGGAAGTGCCTCCGGAGAGAGAT 1800
Query 1779 CTCTGAGATTGTATTCACAGTTAGCAACGTGAGGGATGTACTGAGACACGGGGCGAGATA 1838
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 1801 CTCTGAGATTGTATTCACAGTTAGCAATGTGAGGGATGTACTGAAACACGGGGCGAGATA 1860
Query 1839 CCCAAAGCTGCAGAAGCTCGGGATCGGGATATTGACCAACCTTGCACTTGAGGCCGAAGC 1898
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1861 CCCAAAGCTGCAGAAGCTCGGGATTGGGATATTGACCAACCTTGCACTTGAGGCCGAAGC 1920
Query 1899 TCGGGAGAGAATTGGCGGAACCGGTGGTGTTCTGAAAGAGTTGTTCAACATTTTCTTTAA 1958
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1921 TCGGGAGAGAATTGGCGGAACTGGTGGTGTTCTGAAAGAGTTGTTCAACATTTTCTTTAA 1980
Query 1959 ACGGGAAACACACGGGGACGAGGGGAATGAGGGATGTGTGAGGATTGCTGCAGGAGAAGC 2018
||||||||||| ||| || || ||||||||||||||||||||||| ||||||||||||||
Sbjct 1981 ACGGGAAACACGCGGAGATGAAGGGAATGAGGGATGTGTGAGGATCGCTGCAGGAGAAGC 2040
Query 2019 GATAGCGATGCTTGTGTTGGAGAGCAAGAGCAACTGCCTCCATGTTCTTAGGCTTGGGGT 2078
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 AATAGCGATGCTTGTGTTGGAGAGCAAGAGCAACTGCCTCCATGTTCTTAGGCTTGGGGT 2100
Query 2079 TATTGGAAGACTTGTGGAAGCACTTGAAGTTCCTCCGATCCGTGTGAACGCTGCAAGAGT 2138
||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 2101 TATGGGAAGACTTGTGGAAGCACTTGAAGTTCCTTCGATCCGTGTGAACGCTGCGAGAGT 2160
Query 2139 GTTGAGAAACTTGTGCTTATACTCCGGGGATGAATGCTTTCATGACCTGAAGTTCGTTAA 2198
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 GTTGAGAAACATGTGCTTATACTCCGGGGATGAATGCTTTCATGACCTGAAGTTCGTTAA 2220
Query 2199 AGCAGCAGCACCAACAGTCTTGAAGTCAATAACTTCAGAAGACAACAAATTACAGGAAGT 2258
||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2221 AGCAGCAGCACCAACGGTCTTGAAATCAATAACATCAGAAGACAACAAATTACAGGAAGT 2280
Query 2259 GATGGTGGGATTAGCAGCCCAAGTGTTTAGATTCATGAGTTCAAAAGAATCGAGCTATGT 2318
|||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2281 GATGGTGGGATTAGCAGCACAAGTGTTTAGATTCATGAGCTCAAAAGAATCAAGCTATGT 2340
Query 2319 TTTCTTGGATTCAGGCATCAAGAGACAAGAACTGGCAAACTCGTTGGTCTCAATTCTTAA 2378
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2341 TTTCATGTATTCAGGCATCAAGAGACAAGAACTGGCAAACTCGTTGGTCTCAATTCTGAA 2400
Query 2379 AAAGAACGACAAGCCGGCGATTAAGGTTCCAAGAATCAGGAGGTTTGTGATTGAGCTGGC 2438
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2401 AAAGAACGACAAGCCCGCGATTAAGGTTCCAAGAATCAGGAGGTTTGTAATTGAGCTTGC 2460
Query 2439 GATTTGGATGATGGAAGATGAT---TTGGAGGATAATGTAGCATTGTTTAGAGAGATGGG 2495
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2461 GATTTGGATGATGGAAGATGATGAGTTGGAGGATAATGTAGCATTGTTTAGAGAGATGGG 2520
Query 2496 TCTAGAGAAAGAGCTTGAGAAGGTTCTAGAAACTACTGCTGAGCTCGAGAACTTTGATGT 2555
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2521 TCTAGAGAAAGAGCTTGAGAAGGTTCTAGAAACTACGGCTGAGCTTGAGAACTTTGATGT 2580
Query 2556 TTTCTCCGGTACTGTTGGACTAAGCCGTCATAGCAGAACTGTGCATTCGCTAGCCGAGCT 2615
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 2581 TTTCTCCGGTACTGTTGGACTAAGCCGTCATAGCAGAACTGTCCATTCACTAGCAGAGCT 2640
Query 2616 AGCCTTGGAAATTCTTAGAAGATAAATGAACCATACACCTCATCCTGCAAAATATCTTCA 2675
||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct 2641 AGCCTTGGAAATTCTTAGAGGATAAATGAAGAATACACATCATCCTGCAAAATATCTTCA 2700
Query 2676 AAGCTCTGCATTAGAGCTACAAATATGACTCAATTGTTTTGTAAGAAGAATGAATAAACA 2735
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 2701 AAGCTCTGCATTAGAGCTGCAAATATGACTCA-TTGTTTTGTAAGAAGAATGAATAAACA 2759
Query 2736 ATGTACAAATGTGATGGT 2753
||||||||||||||||||
Sbjct 2760 ATGTACAAATGTGATGGT 2777
> AT3G06210.1 | Symbols: | ARM repeat superfamily protein | chr3:1880093-1883491
FORWARD LENGTH=2697
Length=2697
Score = 1967 bits (1065), Expect = 0.0
Identities = 2047/2511 (82%), Gaps = 108/2511 (4%)
Strand=Plus/Plus
Query 159 AGACGAAGATCGAAGCATTCGTTTGCAGGTCTCT-GAGCTTCAAAAATTGGAGGAAGCTA 217
||| || ||||| ||||| | ||||||||| | | ||||| ||||||||||| ||||| |
Sbjct 21 AGAAGATGATCGGAGCATCCATTTGCAGGTGT-TGGAGCTCCAAAAATTGGAAGAAGC-A 78
Query 218 -GAGGTTCAAACGACACCGTTTTCGATCTA-AGAAGCAGCATTGAGAAAGTCGACAGCGG 275
|||| |||| |||||||||||| ||| || |||| |||| | ||||||| ||||||||
Sbjct 79 CGAGGCTCAAGCGACACCGTTTTGGAT-TATAGAAACAGCGTCGAGAAAGGAGACAGCGG 137
Query 276 CGAAACCGCAGACGCAGCTTCTGTTTCCTCCGCGACCGCGTTTCGTAGAAAATCAACAGT 335
|||||||||||||||||| ||||| || ||||||| |||||||| | | ||||||| |
Sbjct 138 CGAAACCGCAGACGCAGCGTCTGTATCTTCCGCGATCGCGTTTC--A-CAGATCAACA-T 193
Query 336 C-CCAGCTCCGGAGAAGAAGCTAACGCTATTCGCTCTCCAACTCGCGATTC-TTGAGAAA 393
| || || |||||| |||| || || || |||||||||| || || | || | ||||||
Sbjct 194 CACCCGCGCCGGAGCAGAAACTCACACTCTTCGCTCTCCGCCTTGC-AATCATCGAGAAA 252
Query 394 ACCGCCACCGGAA--TCGGAACCCTAGGGTTT-ATCTGGGCCACAGTGGTTCTTCTCGGC 450
| ||||| | || ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct 253 ATCGCCA-C-TAATCTCGGAACCCTA-GGTTTCATTTGGGCCACGGTGGTTCTTCTCGGT 309
Query 451 GGCTTCGCGATCACACTCGACGGTTCCGATTTCTGGTTTATCACCATCATTCTCCTAATC 510
|| ||||| ||||| ||||| |||||||| ||||| ||||||||||||||||| |||
Sbjct 310 GGATTCGCTATCACGCTCGAAAAATCCGATTTTTGGTTCATCACCATCATTCTCCTCATC 369
Query 511 GAAGGTGCTCGAATCTTCAGCAGAAGTCACGAGCTCGAGTGGCAACACCAAGCCACGTGG 570
||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 370 GAAGGCACTCGAATCTTCAGCAGAAGCCACGAGCTCGAGTGGCAGCACCAGGCCACGTGG 429
Query 571 ACCGTCGCCGGCGTCGGAATCAGTAGCTTTCGCGCT-CTCCGATCAAGTTCAGCCTCGCT 629
|| || |||||||||||||||||||||| |||| | |||| |||||| ||| || ||
Sbjct 430 ACTGTATCCGGCGTCGGAATCAGTAGCTTCCGCG-TGCTCCAATCAAGCTCAATTTCACT 488
Query 630 TCTCAAG-AATCTAAAACGAATCAGTGCTTCAATCTTCAAGCC-A----CG---ATCGA- 679
|||| || ||| ||||||||||||| | | ||||| ||||| | || || ||
Sbjct 489 TCTC-AGAAATTTAAAACGAATCAGCGATGGGATCTTTAAGCCGATCCTCGACAATGGAT 547
Query 680 -G-G-GAAGCGACGGCAAGAGACT-GTGTCGTTCCAGAGA-C---GA-CGT--TA-GA-- 725
| | |||||||| | | |||| | | | || | ||||| | || ||| | |
Sbjct 548 TGAGAGAAGCGAC-G-ACGAGAATCG-GACG-ACAAGAGATCTTTGATCGTCGAACAACT 603
Query 726 --GACATGGAAGAACTCAGACGTACCTCTGCTTCCATACGCGAGATGGTTCTTT--ATCT 781
|||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||
Sbjct 604 CTGACATGGAAGAACTCAGAAGTTCCTCTTCTTCCATATGCGAGATGG--CTTTACATCT 661
Query 782 CCAG-TACAGTGAGTCGTCTTCTTTACTGGCTCCAACTTCTATCTGCAACG-GCTTGTGT 839
|||| || |||||||| |||| ||||||||||| ||| | || || | | ||||||||
Sbjct 662 CCAGCTA-TGTGAGTCGGATTCTCTACTGGCTCCAGCTTTTGTCAGCGA-GTGCTTGTGT 719
Query 840 TGCTCTGTCTTCTTACAAGCTTGTCAGGCATAACTATGGAGATGTTCATA-AAGGAGA-T 897
||||||||||| |||||||| || | ||| ||||| ||||||||||| | | ||||| |
Sbjct 720 GGCTCTGTCTTCCTACAAGCTCGTAATGCACAACTACGGAGATGTTCA-AGACGGAGACT 778
Query 898 ACGGATAAGAGGAATAGAC-AGTCGGCTCTCAACATATTCTACTCGCTCGCCT-TTGCGG 955
||| || |||||||||| || | ||||||| ||| ||||||||||| | || |||| |
Sbjct 779 -TGGACAAAAGGAATAGACAAG-CCGCTCTCAGCATCTTCTACTCGCTTG-CTCTTGCCG 835
Query 956 AGGCGTTGTTGTTTCTTGTGGAGAAAGTTTACTGGGAGTGGCAAGTCAGTGTTTGTAATT 1015
| |||||||||||||||| |||||||| ||||||||||||| | |||||||| ||| | |
Sbjct 836 AAGCGTTGTTGTTTCTTGCGGAGAAAGCTTACTGGGAGTGGGAGGTCAGTGTGTGTCACT 895
Query 1016 TGCTTGAGAATGTGACTAGAGAGTGTGAGTTTGGGGTTACTGGTTTGGTTTCGATCAAGA 1075
||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct 896 TGCTTGAGAATGTGACTAGAGAGTGTGGGTTTGGGGTTACTGGAATGGTCTCTATCAAGA 955
Query 1076 GGTTTTTCTATGATTCGTATTCCAAGTGTGTCAATGGGAGTATATTTGATGGTTTGAAGA 1135
| || ||||||||| | || ||||||| ||||||||||||||| ||||||||| ||||||
Sbjct 956 GATTCTTCTATGATGCTTACTCCAAGTCTGTCAATGGGAGTATCTTTGATGGTGTGAAGA 1015
Query 1136 TGGATATAGTGAGCTTTGGTATGGAGCTCTTGGACTCGAACT-CTTCTGATGAACAGCTT 1194
||||||| || ||||||| |||||| ||||||| |||||||| | ||||||||||||||
Sbjct 1016 TGGATATGGTTAGCTTTGCTATGGATCTCTTGGGCTCGAACTGC-TCTGATGAACAGCTC 1074
Query 1195 ATTGGAGTGAGGATTCTTAGGCAGTTTGCAGTGACTGAACGCTACTCGGAGGATACACTT 1254
|| |||| ||||||||||||||||||||| || | ||| || | | | ||||||||||||
Sbjct 1075 ATCGGAGCGAGGATTCTTAGGCAGTTTGCTGTAAATGAGCGGTTCGCAGAGGATACACTT 1134
Query 1255 GAGAAGATCGGAATTAACTTTCCTGTTATTGAAAGGTTGGTGGAGATGTTGAACTGGAAA 1314
||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1135 GAGAAGATCGGTATCAACTTACCTGTCATTGAAAGGTTGGTGGAGATGTTGAACTGGAAA 1194
Query 1315 GATCTCCAAGAGGAAGAGATTAGGAGATCAGCCGCTGAGATACTATCGAAACTTGCTGGC 1374
||||| ||||| |||||||||||||||||||| ||||||||||| || ||||| ||||||
Sbjct 1195 GATCTGCAAGAAGAAGAGATTAGGAGATCAGCGGCTGAGATACTCTCAAAACTCGCTGGC 1254
Query 1375 AAAAAGCAGAACTCTTTAAGAGTTGCTGGTATTTCTGGTGCAATGGAATCGATTTCATCG 1434
||||||||||||||| | ||||||||||| || |||||||| |||||||| ||||||||
Sbjct 1255 AAAAAGCAGAACTCTCTCAGAGTTGCTGGAATCTCTGGTGCGATGGAATCAATTTCATCA 1314
Query 1435 TTGTTAGAGAACACGAGATCATCAGGTGAAGCTCCTGATGAGATTGGAGAGAA-AAAGGT 1493
||||| ||||||| ||||| | ||||||||||||||| |||||||||||||| ||| |
Sbjct 1315 CTGTTACAGAACACAAGATCTTTAGGTGAAGCTCCTGACGAGATTGGAGAGAAGAAAC-T 1373
Query 1494 GTTCCATGACCATAATCTACACTACGATTTCTGGAGATTCAACAATTTGGGCCTTCTA-A 1552
||||| |||||| |||||||||||||||||||||| ||||||||||| ||||| || |
Sbjct 1374 CTTCCACGACCATCATCTACACTACGATTTCTGGAGGTTCAACAATTTAGGCCT-CTTGA 1432
Query 1553 TTCTGAAGAAATTAGCCAAAGATCATGACAACTGTGG-AAAACTCGGCAACACGAGAGGT 1611
|||| ||||||||| ||| |||||||||||||||||| |||| | || |||||||||||
Sbjct 1433 TTCTAAAGAAATTATCCAGAGATCATGACAACTGTGGGAAAATT-GGTAACACGAGAGGG 1491
Query 1612 CTTCTCCCGAAGATAATTGATTTCACACACGCGGATGAAA-ATCTGTTGAGGGATGAGAA 1670
|||||||| ||||| ||||| ||||| ||| | || | || | || |||| |||||||||
Sbjct 1492 CTTCTCCCTAAGATCATTGACTTCACGCACACAGACGCAACA-CTCTTGAAGGATGAGAA 1550
Query 1671 TGCAGACATCGCGAGGTCATGTGTTCTGACACTGAAACGGTCACTTCAGCTTGTGAAAAT 1730
||||| || | |||| | || || ||| |||||||||| || ||||| ||||||||
Sbjct 1551 CGCAGATATGGTTCTGTCACGAGTCCTTACAGTGAAACGGTCGCTGCAGCTAGTGAAAAT 1610
Query 1731 GTTAGCCAGCACAACAGGGAACACAGGGAAGTGCCTCCGGAGAGAGATCTCTGAGATTGT 1790
||||| ||||||| || ||||| ||||| || ||| |||| |||||||| || || ||
Sbjct 1611 GTTAGTAAGCACAAGTGGCAACACCGGGAAATGTCTCAGGAGGGAGATCTCAGAAATCGT 1670
Query 1791 ATTCACAGTTAGCAACGTGAGGGATGTACTGAGACACGGGGCGAGATACCC-AAAGCTGC 1849
|||||| | |||||| |||| || ||| || | || || | ||||||||| ||| |||
Sbjct 1671 CTTCACAATCAGCAACTTGAGAGACGTATTGCGGCATGGAGTGAGATACCCGAAAT-TGC 1729
Query 1850 AGAAGCTCGGGATCGGGATA-TTGACCAACCTTGCACTTGAGGCCGAAGCTCGGGAGAGA 1908
||||||||||||| | ||| || | | ||| || |||||| | || | |||||||||
Sbjct 1730 AGAAGCTCGGGATTGAGATTCTT-AGCTTCCTCGCGCTTGAGACTGATGGGCGGGAGAGA 1788
Query 1909 ATTGGCGGAACCGGTGGTGTTCT-GAAAGAGTTGTTCAACATTTTCTTTAAACGGGAAAC 1967
|||| || || || ||||| || ||||||| |||||| ||||||| | ||| | |||
Sbjct 1789 ATTGCCGTTACTGGAGGTGT-CTTGAAAGAGCTGTTCAGCATTTTCCTAAAAAGTAAAAT 1847
Query 1968 ACACGGGGACGAGGG-GAATGAGGGATGTGTGAGGATTGCTGCAGGAGAAGCGATAGCGA 2026
||| ||||| ||| ||| || | | || ||||| |||||||| ||||| |||| ||
Sbjct 1848 ACATGGGGATGAGAATGAAA-AGCG--G-GTCAGGATGGCTGCAGGTGAAGCTATAGGGA 1903
Query 2027 TGCTTG-TGTTGGAGAGCAAGA-GCAACTGCCTCCATGTTCTTAGGCTTGGGGT-TATTG 2083
|||||| | |||||||||| || |||||||| |||| |||| | ||| || || | |||
Sbjct 1904 TGCTTGCT-TTGGAGAGCA-GAAGCAACTGCATCCAAATTCTAAAGCTCGGAGTCT-TTG 1960
Query 2084 GAAGACTTGTGGAAGCACTTGAAGTTCCTCCGATCCGTGTGAACGCTGCAAGAGTGTTGA 2143
||||||||||||| ||||||||||||||| ||||||||| || || || ||||||||||
Sbjct 1961 GAAGACTTGTGGAGGCACTTGAAGTTCCTTTGATCCGTGTCAATGCAGCGAGAGTGTTGA 2020
Query 2144 GAAACTTGTGCTTATACTCCGGGGATGAATGCTTTCAT-GACCTGAAGTTCGTTAAAGCA 2202
||||||||||| |||| || || |||||||||||| | ||||||| |||| ||||| ||
Sbjct 2021 GAAACTTGTGCATATATTCTGGACATGAATGCTTTC-TCGACCTGAGGTTCATTAAAACA 2079
Query 2203 GCAGCACCAACAGT-CTTGAAGTCAATAACTTCAGAAGACAACAAATTACAGGAAGTGAT 2261
||||| || || || || |||||||||||| |||| ||||| ||||| | |||||||||
Sbjct 2080 GCAGCGCCTACTGTACT-GAAGTCAATAACATCAGGTGACAATAAATTGCTGGAAGTGAT 2138
Query 2262 GGTGGGATTAGCAGCCCAAGTGTTTAGATTCATGAGTTCAAAAGAATCGAGCTATGTTTT 2321
| | ||||| ||||| |||||||| | ||||||||||||| ||||| | | | || | ||
Sbjct 2139 GCTAGGATTGGCAGCACAAGTGTTCAAATTCATGAGTTCAGAAGAAGCAAAC-AT-TGTT 2196
Query 2322 CTT--GGATTCAGGCATCAAGA-GACAAGAACTGGCAAACTCGTTGGTCTCAATTCTTAA 2378
|| ||||||||| ||||| | | |||||||| |||||||| |||| || ||||| ||
Sbjct 2197 CTGACGGATTCAGGGATCAAAAAG-CAAGAACTTGCAAACTCACTGGTTTCGATTCTGAA 2255
Query 2379 AAAGAACGACAAGCCGGCGATTAAGGTTCCAAGAATCAGGAGGTTTGTGATTGAGCTGGC 2438
|||| | |||||||| || || ||||||||||||||||||||||||||||| ||||| ||
Sbjct 2256 AAAGCATGACAAGCCAGCAATCAAGGTTCCAAGAATCAGGAGGTTTGTGATCGAGCTTGC 2315
Query 2439 GATTTGGATGATGGAAGATGATTTGGAGGATAATGTAGCATTGTTTAGAGAGATGGGTCT 2498
||| |||||||||||||||||| ||||| | || | || ||| || || ||||| |
Sbjct 2316 GATATGGATGATGGAAGATGATGTGGAGAACGTTGG-G-AT-GTTCAGGGATTTGGGTAT 2372
Query 2499 AGAGAAAGAGCTTGAGAAGGTTCTAGAAACTACTGCTGAGCTCGAGAACTTTGATGTTTT 2558
||||||||||| | ||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 2373 GGAGAAAGAGCTCGTGAAGGTTCTGGAAACTACGGCTGAGCTTGAGAACTTTGATGTTTT 2432
Query 2559 CTCCGGTACTGTTGGACTAAGCCGTCATAGCAGAACTGTGCATTCGCTAGC 2609
||| || || |||||| | ||||| || |||||||| || |||| | ||||
Sbjct 2433 CTCTGGCACGGTTGGAGTGAGCCGACAGAGCAGAACGGTTCATTGGTTAGC 2483
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136755086618
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5