BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488800 Length=333 Score E Sequences producing significant alignments: (Bits) Value AT5G19151.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 455 1e-127 > AT5G19151.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6428530-6429672 FORWARD LENGTH=392 Length=392 Score = 455 bits (246), Expect = 1e-127 Identities = 254/258 (98%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1 AGAGAGGAAGAAGATGAAGAGGACGGTGATGGACAACGTGATTCGATCATCGGTGGTGGT 60 ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 30 AGAGAGGAAGAAGATGAAGCGGACGGTGATGGACAACGCGATTCGATCATCGGTGGTGGT 89 Query 61 GTTGGGATCATTGGCCTTTGGTTACTTGTCACTGGAACTTGGTTACAAGCCTTTCCTTGA 120 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 90 GTTGGGATCATTGGCCTTTGGTTACTTGTCACTGGAGCTTGGTTACAAGCCTTTCCTTGA 149 Query 121 AAAGGCTGAACAATACGAAAGATCTCTTCAATCTTCTCAACAACATCAACAACAAGATGA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 150 AAAGGCTGAACAATACGAAAGATCTCTTCAGTCTTCTCAACAACATCAACAACAAGATGA 209 Query 181 ACAAGAAGAAGCGAGGTGGGACAATAGCAATGTCGAGGGGTGGGAGGAGAAAAGGTAGTC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 ACAAGAAGAAGCGAGGTGGGACAATAGCAATGTCGAGGGGTGGGAGGAGAAAAGGTAGTC 269 Query 241 TTATAATCGGTTTCAATA 258 |||||||||||||||||| Sbjct 270 TTATAATCGGTTTCAATA 287 Score = 119 bits (64), Expect = 2e-26 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 258 AGAAGAACCTTATCAAAATTTTCTTCTTAATCAACCTTAAGATCAATCTGTTAACTATCC 317 |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 312 AGAAGAACCTTATCAAAATTTTCTTCTTAATCAACCGTAAGTTCAATCTGTTAACTATCA 371 Query 318 ACCATGGCCCGTTTTT 333 ||||||||| |||||| Sbjct 372 ACCATGGCCTGTTTTT 387 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15532734441 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5