BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488814
Length=3235
Score E
Sequences producing significant alignments: (Bits) Value
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:649877... 4900 0.0
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3... 2747 0.0
> AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498779-6503432
FORWARD LENGTH=3322
Length=3322
Score = 4900 bits (2653), Expect = 0.0
Identities = 3058/3252 (94%), Gaps = 34/3252 (1%)
Strand=Plus/Plus
Query 1 GGCAACATAAAATTAAATAATCTAATTCGAAACACAGAAAGTTCCCGCCATGGAGAAGCA 60
||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 88 GGCAACAGAAAATTAAATAATCTAATT--------AGAAA-CTCCCGCCATGGTGAAGCA 138
Query 61 GCTACAACAGCA--A-GAGGACGATCCTGTAGAGAAGACCAAGTCTCTGATCTCTGCTCT 117
||||||| |||| | ||| ||||||| || |||||||| ||||||||||||||||||||
Sbjct 139 GCTACAAGAGCAGGAGGAGAACGATCCCGTCGAGAAGACAAAGTCTCTGATCTCTGCTCT 198
Query 118 TAACTACGTTTCTCGCGACCTTCTCTTGCCTTCTCACCTTTACGCTTCCGTTTCTTCCAT 177
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 199 TAACTACCTTTCTCGCGACCTTCTCTTGCCTTCTCACCTTTACGCTTCCGTTTCTTCTAT 258
Query 178 CTACCATGGCTCCGTCTCCGATCTCTCTCCTCCTCCGCCTCTTCGTGAAAATTGTTTTAC 237
||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||| |||
Sbjct 259 TTACCATGCCTCCGTCTCCGATCTCTCTCCTTCTCCGCCTCTTCGTGGAAATAGTTATAC 318
Query 238 TCCCAATAGAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTG-AAGCAGCGACTAA 296
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 319 TCCCAATAGAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTGCAA-CAGCGACTAA 377
Query 297 ACTGTGAATCAGGCTCTCGACTTGCCCAATTTAAGGAAACTCGCTATAAGAGTCGTTTCC 356
||| |||||||||||||||||| ||| | || ||||||||||| ||||||| |||| |||
Sbjct 378 ACTATGAATCAGGCTCTCGACTAGCCGAGTTAAAGGAAACTCGGTATAAGAATCGTATCC 437
Query 357 AGAATCGATTATCTGAACTTGAAGGATTACCTTCCAATAGAGGTGAAGATTTGCAGGAAA 416
| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 438 ACAACCGATTATCTCAACTTGAAGGATTACCTTCCAATAGAGGTGAAGATTTGCAGGAAA 497
Query 417 AATGCTTACTTGAGCTTTATGGGCTTAAGCTAAAAGAACTACAATGCAAGGTTCGGGCTG 476
|||||||||||||||||||||| |||||| || ||||||||||||||| |||||||| ||
Sbjct 498 AATGCTTACTTGAGCTTTATGGTCTTAAGTTACAAGAACTACAATGCAGGGTTCGGGGTG 557
Query 477 AGGTGAGCGCGGAATACTGGCTGCGTTTGAATTGTGCACATCCTGAAAGCCAACTATATG 536
||||||| |||||||||||||||||||||||||||||| |||| || || ||||||||||
Sbjct 558 AGGTGAGTGCGGAATACTGGCTGCGTTTGAATTGTGCAGATCCGGAGAGACAACTATATG 617
Query 537 ACTGGGGCATGATGCGGTTGCCTCGCCGAATGTATGGGGTTGGAGATCCTTTTCATATGG 596
| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 618 ATTGGGGCATGATGCGGTTGCCTCGCCGAATGTATGGGGTTGGAGATTCTTTTGTTATGG 677
Query 597 AAGCTGATGATCAGTTCAGAAACAAGCGTGATGCCGAGAGGTTATTACGGTTAGAAGAGG 656
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 678 AAGCTGATGATCAGTTCAGGAACAAGCGTGATGCCGAGAGGTTATTACGGTTAGAAGAAG 737
Query 657 AGGAGAAGAATCTCATTGAAACGACACAGAGGAAATTCTTTGCAGAAATACTCAATGCTG 716
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 738 AGGAGAAGAATCTGATTGAAACGACACAGAGGAAATTCTTTGCAGAAGTACTCAATGCTG 797
Query 717 TTCGTGAATTCCAGTTACAAATTCAGGCGACTCATAGACGCTGTAAGCAAAGAAATGATG 776
|||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||
Sbjct 798 TTCGTGAATTCCAGTTGCAAATTCAGGCGTCTCATAGACGGTGTAAGCAAAGAAATGATG 857
Query 777 GTGTCCAGGCCTGGCATGGAAAGCAAAGGCAACGTGCCACCCGAGCTGAAAAACTAAGGA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 858 GTGTCCAGGCCTGGCATGGAAAGCAAAGGCAACGTGCCACCCGAGCTGAAAAACTAAGGA 917
Query 837 TCATGGCCCTTAAATCTGATGATCAAGAGGAATACATGAAACTAGCAAAGGAGAGTAAAA 896
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 918 TCATGGCCCTTAAATCTGATGATCAAGAGGAATACATGAAACTAGCAAAGGAAAGTAAGA 977
Query 897 ACGAAAAACTAACTCTTTTCCTAGAGGAGACAAACAAAATCTTTGTTAGTTTGGGAGCTG 956
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 978 ACGAAAAACTAACCCTTTTTCTAGAGGAGACAAACAAAATCTTTGTTAGTTTGGGGGCTG 1037
Query 957 CAGTCCAGCGTCAGAAAGATGCCAAACTTTCAGAAAACATCAAACTACTGAAAGGCTCAG 1016
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 1038 CAGTCCAGCGTCAGAAAGATGCCAAACTTTCAGAAAACACCAAATTACTGAAAGGCTCAG 1097
Query 1017 AATCTGACTTATCTGATGTTGATGCTCCC-ACGGATGTGCTTCCTGACCAAGATATTGGG 1075
|||||||||||||||||||||||||||| | |||||||||||||| ||||||||||| |
Sbjct 1098 AATCTGACTTATCTGATGTTGATGCTCCTGA-GGATGTGCTTCCTGCCCAAGATATTGAG 1156
Query 1076 ATCATTGACTCTGACAATAATGATGATTCTAATGACTTACTAGAAGGCGAGAGGCAGTAT 1135
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1157 ATCATTGACTCTGACAATAATGATGATTCTAATGACTTACTAGAAGGCGAGAGGCAGTTT 1216
Query 1136 AACTTGGCTATTCATTCAATACAAGAGAAGGTGACAAAGCAGCCATCCCTTCTACAAGGT 1195
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 AACTTGGCTATCCATTCCATACAAGAGAAGGTGACAAAGCAGCCATCCCTTCTACAAGGT 1276
Query 1196 GGGGAACTAAGATCCTACCAATTAGAAGGGCTTCAATGGATGGTCTCTCTATACAACAAC 1255
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1277 GGGGAACTAAGATCCTATCAATTAGAAGGACTTCAATGGATGGTCTCTCTATACAACAAT 1336
Query 1256 GACTATAATGGCATTTTAGCTGATGAAATGGGTTTGGGAAAGACTATCCAAACAATTGCA 1315
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1337 GACTATAATGGCATTTTAGCTGATGAAATGGGTTTAGGAAAGACTATCCAAACGATTGCA 1396
Query 1316 CTGATTGCGTATCTTCTTGAAAGTAAAAATGTGCATGGGCCTCATCTAATAGTGGCTCCA 1375
|||||||||||||||||||| |||||| || | |||||||||||||||||| ||||||||
Sbjct 1397 CTGATTGCGTATCTTCTTGAGAGTAAAGATCTTCATGGGCCTCATCTAATATTGGCTCCA 1456
Query 1376 AAAGCTGTGCTACCAAATTGGGAAAATGAGTTTGCAACATGGGCACCCAGCATTTCCGCT 1435
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1457 AAAGCTGTGCTACCAAATTGGGAAAATGAGTTTGCATTATGGGCACCCAGCATTTCCGCT 1516
Query 1436 TTTCTTTACGATGGATCAAAGGAGAAAAGAACTGAAATAAGAGCCAGAATAGCAGGAGGA 1495
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1517 TTTCTTTACGATGGATCAAAGGAGAAAAGAACTGAAATAAGAGCAAGAATAGCAGGAGGA 1576
Query 1496 AAATTTAGCGTATTGATAACCCACTACGATCTTATCATGAGAGATAAAGCATTTTTGAAG 1555
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1577 AAATTTAATGTGTTGATAACCCACTACGATCTTATCATGAGAGATAAAGCATTTTTGAAG 1636
Query 1556 AAAATTGACTGGAATTACATGATTGTTGATGAAGGACATCGGCTGAAGAACCATGAATCT 1615
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1637 AAAATTGACTGGAACTACATGATTGTTGATGAAGGACATCGTCTGAAGAACCATGAATGT 1696
Query 1616 GCTCTAGCAAAGACTCTAGGAACTGGCTACCGTATTAAGCGCAGACTTCTATTAACTGGG 1675
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1697 GCTCTCGCAAAGACTCTAGGAACTGGCTACCGGATTAAGCGCAGACTTCTATTAACTGGA 1756
Query 1676 ACTCCCATACAGAACAGTCTGCAAGAACTATGGTCGCTGCTTAATTTTCTCCTTCCTCAC 1735
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1757 ACTCCCATACAGAACAGTCTGCAAGAACTATGGTCGCTGCTTAATTTTCTTCTTCCTCAC 1816
Query 1736 ATCTTTAACTCGATTCAGAATTTCGAAGAATGGTTTAATACTCCTTTCGCAGAACGTGGC 1795
||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1817 ATCTTTAACTCAATTCATAATTTCGAAGAATGGTTTAATACTCCATTCGCAGAATGTGGT 1876
Query 1796 AGTGCCAGTCTTACAGATGAAGAGGAGCTGTTGATTATTAATCGTCTGCATCATGTCATC 1855
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1877 AGTGCCAGTCTTACAGATGAAGAGGAGCTGTTGATTATTAACCGTCTGCATCATGTCATA 1936
Query 1856 AGGCCGTTTCTACTGAGAAGGaaaaaaaGTGAAGTTGAGAAATTCCTTCCTGGAAAGACA 1915
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1937 AGGCCGTTTCTACTGAGAAGGAAAAAAAGTGAGGTTGAGAAATTCCTTCCTGGAAAGACA 1996
Query 1916 CAAGTCATACTGAAGTGTGATATGTCGGCTTGGCAAAAATTGTATTACAAACAAGTTACA 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1997 CAAGTCATACTGAAGTGTGATATGTCGGCTTGGCAAAAATTGTATTACAAACAAGTTACA 2056
Query 1976 GATGTAGGCAGGGTTGGTCTTCATTCTGGCAATGGGAAATCAAAGAGTCTGCAGAATCTG 2035
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057 GACGTAGGCAGGGTCGGTCTTCATTCTGGCAATGGGAAATCAAAGAGTCTGCAGAATCTG 2116
Query 2036 ACAATGCAATTAAGAAAGTGTTGTAACCATCCGTACCTATTTGTTGGAGGAGATTATAAC 2095
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 2117 ACAATGCAATTAAGAAAGTGTTGTAACCATCCGTACCTATTCGTTGGAGCAGATTATAAC 2176
Query 2096 ATGTGGAAGAAGCCTGAGATTGTGAGAGCTTCAGGAAAATTCGAGCTACTTGATCGCCTC 2155
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2177 ATGTGTAAGAAGCCTGAGATTGTGAGAGCTTCAGGAAAATTCGAGTTACTTGATCGCCTC 2236
Query 2156 CTTCCGAAACTGAAGAAAGCTGGACATAGAATTCTTCTCTTCTCTCAAATGACTCGTCTC 2215
||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2237 CTTCCAAAACTGAAGAAAGCTGGACATAGAATTCTGCTCTTTTCTCAAATGACTCGTCTC 2296
Query 2216 ATCGACCTTCTCGAAATTTACTTGACACTCAATGACTACATGTACCTCAGACTCGACGGT 2275
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 2297 ATTGACCTTCTCGAAATTTACTTGTCACTCAATGACTACATGTACCTCAGACTTGACGGT 2356
Query 2276 ACCACAAAGACAGACCAAAGAGGGGTTTTACTGAAGCAATTCAATGAACCGGAGTCTCCC 2335
| |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct 2357 AGCACAAAGACAGACCAAAGAGGGATTTTACTGAAGCAATTCAACGAACCGGACTCTCCC 2416
Query 2336 TACTTCATGTTTCTTTTGAGCACACGTGCCGGTGGTCTTGGTTTGAACTTACAAACAGCA 2395
||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 2417 TACTTTATGTTTCTTCTGAGCACACGTGCTGGTGGTCTTGGTTTGAACTTACAAACTGCA 2476
Query 2396 GACACTATTATTATATTTGACAGTGATTGGAATCCACAAATGGACCAGCAGGCGGAGGAT 2455
|||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2477 GACACTATAATTATATTTGACAGTGATTGGAATCCACAAATGGACCAGCAAGCAGAGGAT 2536
Query 2456 CGTGCCCACCGGATAGGGCAGAAAAAGGAAGTGAGAGTGTTTGTTTTGGTTAGTATTGGC 2515
||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 2537 CGTGCTCATCGGATAGGGCAGAAAAAGGAAGTGAGAGTTTTTGTTTTGGTTAGCATTGGA 2596
Query 2516 TCTATTGAAGAGGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATTGATGCCAAAGTC 2575
|| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 2597 TCCATTGAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATCGATGCGAAAGTC 2656
Query 2576 ATACAAGCAGGACTCTTCAACACAACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAA 2635
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 ATACAAGCAGGGCTCTTCAACACAACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAA 2716
Query 2636 GAGATCATGAGCAAAGGAACAAGCTCACTGGGGGAAGATGTGCCAAGTGAGAGAGAGATT 2695
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2717 GAGATCATGAGCAAAGGAACAAGCTCACTGGGAGAAGATGTGCCAAGTGAGAGAGAGATT 2776
Query 2696 AACCGGCTCGCAGCTCGAACGGAGGATGAGTTTTGGATGTTTGAACAAATGGACGAGGAA 2755
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 2777 AACCGGCTCGCAGCTCGAACTGAGGAAGAGTTTTGGATGTTTGAACAAATGGACGAGGAA 2836
Query 2756 AGACGGAAAAAGGAGAACTACAAGACACGTCTCATGGAAGAGAAGGAAGTTCCTGAGTGG 2815
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2837 AGACGTAAAAAGGAGAACTACAAGACACGTCTCATGGAAGAGAAGGAAGTTCCCGAGTGG 2896
Query 2816 GCTTACACTTCAGAGACTCAAGAAGACAAGAACGATT-CAAAAAACCATTTTGGCAGCCT 2874
||||||||||||||||||||||||||||||| | | | |||||||||||||| |||||
Sbjct 2897 GCTTACACTTCAGAGACTCAAGAAGACAAGA-CTAACGCGAAAAACCATTTTGGTAGCCT 2955
Query 2875 CACGGGTAAACGGAAACGAAAAGAAGCAGTGTACAGCGACTCTTTAAGCGATTTGCAGTG 2934
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2956 CACGGGTAAACGGAAACGAAAAGAAGCAGTGTATAGCGACTCTTTAAGCGATTTGCAGTG 3015
Query 2935 GATGAAAGCGATGGAGAGTGAAGACGAAGATGCTTCCAAAGTCTCTAAGAAACGAAAGAG 2994
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3016 GATGAAAGCGATGGAGAGTGAAGACGAAGATGCTTCCAAAGTCTCTCAGAAACGAAAGAG 3075
Query 2995 AAGGGACACAAAGACACCAATGAGTAATGGGTCAaaggcagaggcagag--gcagag--- 3049
|| ||||||||||||| ||||||||||||||||||||||||||| | | | || |
Sbjct 3076 AACGGACACAAAGACAAGAATGAGTAATGGGTCAAAGGCAGAGGCTGTGTTG-AGTGAAA 3134
Query 3050 gc-a-gagtcgagtg--gaagc-gaagaggaaagaaaggaggagagtgggaaagagagtg 3104
|| | ||| | | |||| ||||| ||||| |||||||||||||||||||||||||
Sbjct 3135 GCGATGAGGAAAAAGAAGAAGAAGAAGAAGAAAGGAAGGAGGAGAGTGGGAAAGAGAGTG 3194
Query 3105 aagaagaaaacgagaagaagCCATTAAATAGTTGGAAAACTCATAAGAAGAAACGGTCAA 3164
|||||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct 3195 AAGAAGAAAATGAGAAG---CCATTACATAGTTGGAAAACTAATAAGAAGAAACGGTCAA 3251
Query 3165 GATACTCTCTTATGACTTCTTCACCTAACTCTAGAGGTAAGAG-TAGCTCCAACGGAAGC 3223
||||| || ||||||||||||||||||| ||||||||||| || |||||| || |||||
Sbjct 3252 GATACCCTGTTATGACTTCTTCACCTAATTCTAGAGGTAA-AGGTAGCTCAAAAGGAAGT 3310
Query 3224 AAACGAAACTGA 3235
||||||||||||
Sbjct 3311 AAACGAAACTGA 3322
> AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:1802228-1807478
REVERSE LENGTH=3710
Length=3710
Score = 2747 bits (1487), Expect = 0.0
Identities = 2476/2945 (84%), Gaps = 102/2945 (3%)
Strand=Plus/Plus
Query 80 GATCCTGTAGAGAAGACCAAGTCTCTGATCTCTGCTCTTAACTACGTTTCTCGCGACCTT 139
||||| || |||| |||||||||||||||| |||||| || ||| ||||||| ||||||
Sbjct 243 GATCCAGTTGAGACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTT 302
Query 140 -CTCTTGCCTTCTCACCT-TTACGCTTCCGTTTCTTCCATCTACCAT-G-GC-TC--CGT 192
|| |||||| ||||||| || | | |||||||||| ||||||||| | || || | |
Sbjct 303 CCT-TTGCCTCCTCACCTCTT-CACCGCCGTTTCTTCAATCTACCATGGCGCTTCTTCTT 360
Query 193 CTCCGATCTCT--CTCC----TC-CTCCG-C-CT--CTTCGT-G-AAAAT-TG-TTTTA- 236
|| | ||||| |||| || ||||| | || || | | | | | | |
Sbjct 361 CTTCTCTCTCTGACTCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAAAG 420
Query 237 CTCCCAATAGAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTGAAGCAGCGACTAA 296
||||| || ||| |||||||||| | || ||||| |||||||||||||||||| ||| |
Sbjct 421 CTCCCTATGGAGCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCAG 480
Query 297 ACTGTGAATCAGGCTCTCGACTTG-CCCAATTTA-AGGA-AACTCGCTATAAGAGTCGTT 353
| |||||||||||||||||| ||| ||| ||| ||| || ||| ||||||||| |
Sbjct 481 ATTGTGAATCAGGCTCTCGA-TTGATACAA-TTACTGGATAA-TCGGAATAAGAGTCATA 537
Query 354 TCCAGA-ATCGATTATCTGAACTTGAAGGATTACCTTCCAATAGAGGTGAAGATTTGCAG 412
|||| | || |||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 538 TCCA-ACGCCGCTTATCTGAACTTGAAGAATTACCTTCTACTAGAGGTGAAGATTTGCAG 596
Query 413 GAAAAATGCTTACTTGAGCTTTATGGGCTTAAGCTAAAAGAACTACAATGCAAGGTTCGG 472
| ||| |||||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct 597 GCAAAGTGCTTACTTGAGCTTTATGGGCTTAAGCTACGGGAATTGCAAGGCAAGGTTCGA 656
Query 473 GCTGAGGTGAGCGCGGAATACTGGCTGCGTTTGAATTGTGCACATCCTGA-AAGCCAACT 531
| | ||||||| |||||| |||||| ||| |||| |||||| || | | |||||| |
Sbjct 657 ACCGCGGTGAGCTCGGAATTCTGGCTACGTCTGAACTGTGCAGAT-GTCAGTAGCCAAGT 715
Query 532 ATATGACTGGGGCATGATGCGGTTGCCTCG-CCGAATGTATGGGGTTGGAGATCCTTTT- 589
|| ||||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct 716 ATTTGACTGGGGCATGATGCGGTTGCCTCGTCC-ATTTTATGGGGTTGGAGATCCTTTTG 774
Query 590 CATATGGAAGCTGATGATCAGTTCAGAAACAAGCGTGATGCCGAGAGGTTATTACGGTTA 649
| ||||||||||||||||||||||||||| |||||||| || |||||||||| ||| |||
Sbjct 775 C-TATGGAAGCTGATGATCAGTTCAGAAAGAAGCGTGACGCTGAGAGGTTATCACGTTTA 833
Query 650 GAAGAGGAGGAGAAGAATCTCATTGAAAC-GACACAGAGGAAATTCTTTGCAGAAATACT 708
||||| |||||||||||||| |||||||| | || |||||||||||||||||||| ||||
Sbjct 834 GAAGAAGAGGAGAAGAATCTGATTGAAACTGCCA-AGAGGAAATTCTTTGCAGAAGTACT 892
Query 709 CAATGCTGTTCGTGAATTCCAGTTACAAATTCAGGCGACTCATAGACGCTGTAAGCAAAG 768
|||||| || |||||||||||||| ||||||||||||||||| | |||| ||| ||||||
Sbjct 893 CAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAAAACGCCGTAGGCAAAG 952
Query 769 AAATGATGGTGTCCAGGCCTGGCAT-GGAAAGCAAAGGCAACGTGCCACCCGAGCTGAAA 827
||||||||||| ||||| |||||| ||| | ||||| ||||| || ||||| |||||||
Sbjct 953 GAATGATGGTGTGCAGGCTTGGCATGGGAGA-CAAAGACAACGCGCTACCCGTGCTGAAA 1011
Query 828 AACTAAGGATCATGGCCCTTAAATCTGATGATCAAGAGGAATACATGAAACTAGCAAAGG 887
| | ||| ||||||||||||| || ||||||||||||| |||||||||||||| |||||
Sbjct 1012 AGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACATGAAACTAGTAAAGG 1071
Query 888 AGAGTAAAAACGAAAAACTAA-CTCT-TTTCCTAGAGGAGACAAACAAAATCTTTGTTAG 945
|||||||||| |||| ||||| | || ||| ||||||||||||||||| || ||| ||
Sbjct 1072 AGAGTAAAAATGAAAGACTAACCACTCTTT--TAGAGGAGACAAACAAACTCCTTGCTAA 1129
Query 946 TTTGGGAGCTGCAGTCCAGCGTCAGAAAGATGCCAAACTTTCAGAAAACATCAAACTACT 1005
|||||||||||| || || |||||||||||||| |||||| | ||| ||| | |||||
Sbjct 1130 TTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAGGCATTGATCTACT 1189
Query 1006 GAAAGGCTCAGAATCTGACTTATCTGATGTTGATGCT-C----------CCA---C-GGA 1050
|||| ||||||||||||||| ||||| |||||||| | ||| | |||
Sbjct 1190 TAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTGAACCATTGCAGGA 1249
Query 1051 TGTGCTTCCTGACCAAGATATTGGGATCATTGACTCTGACAATAATGATGATTCTAATGA 1110
| |||||||||| || ||||| | || | ||| ||||||||||| ||||| ||||||||
Sbjct 1250 TCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACGATGACTCTAATGA 1309
Query 1111 CTTACTAGAAGG-CGAGAGGCAGTATAACTTGGCTATTCATTCAATACAAGAGAAGGTGA 1169
||||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 1310 TTTACTAGAAGGAC-AGAGGCAGTATAACTCGGCTATCCATTCAATACAAGAGAAGGTGA 1368
Query 1170 CAAAGCAGCCATCCCTTCTACAAGGTGGGGAACTAAGATCCTACCAATTAGAAGGGCTTC 1229
| ||||||| || |||||| |||||||||||||| ||||||| ||||||||||||||||
Sbjct 1369 CGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAATTAGAAGGGCTTC 1428
Query 1230 AATGGATGGTCTCTCTATACAACAACGA-CTATAATGGCATTTTAGCTGATGAAATGGGT 1288
|||||||||| ||||||| |||||| | || ||||| || ||||||||||| ||||||
Sbjct 1429 AATGGATGGTTTCTCTATTCAACAATAACCT-CAATGGAATATTAGCTGATGAGATGGGT 1487
Query 1289 TTGGGAAAGACTATCCAAACAATTGCACTGATTGCGTATCTTCTTGA-AAGTAAAAATGT 1347
|||||||| ||||| ||||||||| | ||||||||||||||||| || || |||| |||
Sbjct 1488 TTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGAA-TAAAGGTGT 1546
Query 1348 GCATGGGCCTCATCTAATAGTGGCTCCAAAAGCTGTGCTACCAAATTGGGAAAATGAGTT 1407
|| ||||||| |||| ||||| |||||||||||||||||||||||||||| ||| |||||
Sbjct 1547 GCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGGTAAACGAGTT 1606
Query 1408 TGCAACATGGGCACCCAGCATTTCCGCTTTTCTTTACGATGGATC--AAAGGA-GAAAAG 1464
||||||||||| ||| |||||| | |||||||| || |||||| | | || |||| |
Sbjct 1607 TGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGA-CGTTTA-GAGGAAAGG 1664
Query 1465 AACTGAAATAAGAGCCAGAATAGCA-G-G-AGGAAAATTTAGCGTATTGATAACCCACTA 1521
|| | |||||| | | ||| ||| | | ||||||||||| || ||||||||||| ||
Sbjct 1665 AA-AGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAACCCATTA 1723
Query 1522 CGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGACTGGAATTACATGATTGT 1581
||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||
Sbjct 1724 TGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACATGATTGT 1783
Query 1582 TGATGAAGGACATCGGCTGAAGAACCATGAATCTGCTCTAGCAAAGACTCTAGGAACTGG 1641
||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||
Sbjct 1784 TGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTATTAACAGG 1843
Query 1642 CTACCGTATTAAGCGCAGACTTCTATTAACTGGGACTCCCATACAGAACAGTCTGCAAGA 1701
||| ||||| || ||||||||||| || || ||||| ||||||||||| || || |||||
Sbjct 1844 CTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCCTTCAAGA 1903
Query 1702 ACTATGGTCGCTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGATTCAGAATTTCGA 1761
||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1904 ACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGAACTTCGA 1963
Query 1762 AGAATGGTTTAATACTCCTTTCGCAGAACGTGGCAGTGCCAGTCTTACAGATGAAGAGGA 1821
|||||||||||| |||||||||| || ||||| | || |||||| || |||||||||||
Sbjct 1964 GGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATGAAGAGGA 2023
Query 1822 GCTGTTGATTATTAATCGTCTGCATCATGTCATCAGGCCGTTTCTACTGAGAAGGaaaaa 1881
||| ||||||||| | || ||||||||||| || ||||||||| ||||||||||||||||
Sbjct 2024 GCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAAGGAAAAA 2083
Query 1882 a-aGTGAAGTTGAGAAATTCCTTCCTGGAAAGACACAAGTCATACTGAAGTGTGATATGT 1940
| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 2084 GGAC-GAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTGATATGT 2142
Query 1941 CGGCTTGGCAAAAATTGTATTACAAACAAGTTACAGATGTAGGCAGGGTTGGTCTTCATT 2000
|||| ||||| ||| |||||||||||||||||||||| | ||||||||||| |||||
Sbjct 2143 CGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCCTTCAAA 2202
Query 2001 CTGGCAA-TGGGAAATCAAAGAGTCTGCAGAATCTGACAATGCAATTAAGAAAGTGTTGT 2059
| || | ||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 2203 CAGG-ATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGTGTTGT 2261
Query 2060 AACCATCCGTACCTATTTGTTGGAGGAGATTATAACATGTGGAAGAAGCCTGAGATTGTG 2119
|||||||| || ||||||||||||||||| || || ||||||||||| ||||||||||||
Sbjct 2262 AACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGATTGTG 2321
Query 2120 AGAGCTTCAGGAAAATTCGAGCTACTTGATCGCCTCCTTCCGAAACTGAAGAAAG-CTGG 2178
||||||||||| ||||| || || |||||||| |||||||| |||||| | ||| ||||
Sbjct 2322 AGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGC-GCAAGGCTGG 2380
Query 2179 ACATAGAATTCTTCTCTTCTCTCAAATGACTCGTCTCATCGACCTTCTCGAAATTTACTT 2238
|||||| |||||||||||||| |||||||| |||||||| ||| |||| || || |||||
Sbjct 2381 ACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATATACTT 2440
Query 2239 GACACTCAATGACTACATGTACCTCAGACTCGACGGTACCACAAAGACAGACCAAAGAGG 2298
|||||| ||||| |||| ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 2441 GACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAAGAGG 2500
Query 2299 GGTTTTACTGAAGCAATTCAATGAACCGGAGTCTCCCTACTTCATGTTTCTTTTGAGCAC 2358
| ||||||||||||||||||| || || || ||||||||||| |||||||||||||||||
Sbjct 2501 GCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGAGCAC 2560
Query 2359 ACGTGCCGGTGGTCTTGGTTTGAACTTACAAACAGCAGACACTATTATTATATTTGACAG 2418
||||| || ||||| ||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct 2561 GCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTGACAG 2620
Query 2419 TGATTGGAATCCACAAATGGACCAGCAGGCGGAGGATCGTGCCCACCGGATAGGGCAGAA 2478
||||||||| |||||||||||||| ||||| |||||||| || || || |||||||||||
Sbjct 2621 TGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGCAGAA 2680
Query 2479 AAAGGAAGTGAGAGTGTTTGTTTTGGTTAGTATTGGCTCTATTGAAGAGGTAATATTGGA 2538
|||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct 2681 GAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATATTGGA 2740
Query 2539 GCGTGCAAAGCAAAAGATGGGCATTGATGCCAAAGTCATACAAGCAGGACTCTTCAACAC 2598
||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 2741 GCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCAACAC 2800
Query 2599 AACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAAGAGATCATGAGCAAAGGAACAAG 2658
|||||| ||||| |||||||| ||||||||||| |||||||| ||| | |||||||||||
Sbjct 2801 AACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAACAAG 2860
Query 2659 CTCACTGGGGGA-AGATGTGCCAAGTGAGAGAGAGATTAACCGGCTCGCAGCTCGAACG- 2716
||| || ||| | |||||| || ||||||||||| || |||||||| || ||||| | |
Sbjct 2861 CTCGCTCGGG-ACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTA-GT 2918
Query 2717 GAGGATGAGTTTTGGATGTTTGAACAAATGGACGAGGAAAGACGGAAA-AAGGAGAACTA 2775
|||||||| |||||||||||||| | |||||| ||||| ||||| || |||||||| ||
Sbjct 2919 GAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACG-AAGGAAGGAGAATTA 2977
Query 2776 CA-AGACACGTCTCATGGAAGAG-AAGGAAGTTCCTGAGTGGGCTTACACTTCAGAGACT 2833
|| || | ||||| ||| ||||| ||| |||| ||||||||||| |||||| | ||||
Sbjct 2978 CAGAGCC-CGTCTGATGCAAGAGCAAG-AAGTCCCTGAGTGGGCGTACACTACTCAGACC 3035
Query 2834 CAAGAAGACAAG---AACGATTCAAAAAACCATTTTGGCAGCCTCACGGGTAAACGGAAA 2890
||||| || ||| ||| | ||| ||||||||| || |||| ||||| || |||
Sbjct 3036 CAAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAAA 3095
Query 2891 CGAAAAGAAGCAGTGT--ACAGCGACTCTTTAAGCGATTTGCAGTGGATGAAAGC-GATG 2947
|| ||||| | | ||| |||||||| | ||||||| || |||||| ||||||| | ||
Sbjct 3096 CGTAAAGA-G-ATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCG-TG 3152
Query 2948 GAGAG 2952
|||||
Sbjct 3153 GAGAG 3157
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160935553144
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5