BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488835
Length=2002
Score E
Sequences producing significant alignments: (Bits) Value
AT5G19450.1 | Symbols: CDPK19, CPK8 | calcium-dependent protein... 3049 0.0
AT5G12480.1 | Symbols: CPK7 | calmodulin-domain protein kinase ... 1742 0.0
> AT5G19450.1 | Symbols: CDPK19, CPK8 | calcium-dependent protein
kinase 19 | chr5:6558426-6561534 REVERSE LENGTH=1911
Length=1911
Score = 3049 bits (1651), Expect = 0.0
Identities = 1802/1873 (96%), Gaps = 18/1873 (1%)
Strand=Plus/Plus
Query 139 TCTCAGGACTTCTCAGATTTGAATTATATACATGGGAAATTGTTGTGCTAGCCCCGGTTC 198
||||||||||||||||||| |||||||| | ||||||||||||||||| ||||| |||||
Sbjct 35 TCTCAGGACTTCTCAGATTCGAATTATA-A-ATGGGAAATTGTTGTGCGAGCCCGGGTTC 92
Query 199 TGAAACTGGGAGTAAGAATGGGAAACCAAAGATCAAAAGTAACCCGTTTTACAGCGAGGC 258
|| |||||||||||||| |||||||||||||||||||||||||||||||| || || ||
Sbjct 93 GGAGACTGGGAGTAAGAAGGGGAAACCAAAGATCAAAAGTAACCCGTTTTATAGTGAAGC 152
Query 259 ATACACTACAAATGGATCTGGAACTGGCTTCAAGCTCTCTGTTTTGAAAGATCCAACAGG 318
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 153 ATACACTACGAATGGATCTGGAACTGGGTTCAAGCTCTCTGTTTTGAAAGATCCAACAGG 212
Query 319 GCATGATATATCTCTTATGTATGATCTGGGGCGTGAGGTTGGTCGCGGAGAGTTTGGTAT 378
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 ACATGATATATCTCTTATGTATGATCTGGGGCGTGAGGTTGGTCGCGGAGAGTTTGGTAT 272
Query 379 TACATACTTGTGCACTGATATCAAAACGGGTGAGAAGTATGCGTGCAAGTCTATATCAAA 438
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 273 TACTTACTTGTGCACTGATATCAAAACGGGCGAGAAGTATGCGTGCAAGTCTATATCAAA 332
Query 439 GAAGAAGCTTAGAACAGCTGTGGATATAGAGGATGTTAGGAGGGAAGTTGAGATAATGAA 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333 GAAGAAGCTTAGAACAGCTGTGGATATAGAGGATGTTAGGAGGGAAGTTGAGATAATGAA 392
Query 499 GCATATGCCTAAG-CACCCGAATATCGTGTCGCTCAAGGATGCCTTTGAGGACGATGATG 557
||||||||| || ||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 393 ACATATGCCT-AGACACCCAAATATCGTGTCGCTGAAGGATGCCTTTGAGGATGATGATG 451
Query 558 CAGTGCATATAGTTATGGAGTTGTGTGAAGGGGGTGAGCTGTTTGATCGGATTGTTGCAA 617
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 452 CAGTGCATATAGTTATGGAGTTGTGTGAAGGAGGTGAGCTGTTTGATCGGATTGTTGCTA 511
Query 618 GAGGTCATTACACTGAACGAGCTGCTGCTGCAGTAATGAAAACTATTCTTGAAGTTGTTC 677
|||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 512 GAGGTCATTATACTGAGCGAGCTGCTGCTGCAGTGATGAAGACTATTCTTGAAGTTGTTC 571
Query 678 AGATATGCCATAAGCATGGAGTGATGCATCGGGATCTAAAGCCGGAGAACTTTCTCTTTG 737
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 572 AGATATGCCATAAGCATGGAGTGATGCATCGGGATCTAAAGCCTGAGAACTTTCTCTTTG 631
Query 738 CAAATAAAAAAGAGACATCAGCCCTTAAAGCCATAGACTTTGGATTATCAGTCTTCTTCA 797
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 632 CAAATAAAAAAGAGACATCAGCCCTTAAAGCCATAGATTTTGGATTATCAGTCTTCTTCA 691
Query 798 AGCCTGGTGAGGGATTCAACGAGATTGTTGGAAGTCCTTATTACATGGCACCAGAGGTAC 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 AGCCTGGTGAGGGATTCAACGAGATTGTTGGAAGTCCTTATTACATGGCACCAGAGGTAC 751
Query 858 TGAGGCGAAATTATGGACCTGAGGTTGATATCTGGAGTGCTGGAGTTATCCTTTATATCC 917
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 TTAGGCGAAATTACGGACCTGAGGTTGATATCTGGAGTGCTGGAGTTATCCTTTATATCC 811
Query 918 TGCTCTGTGGTGTCCCACCATTTTGGGCCGAGACTGAGCAAGGGGTGGCTCAGGCGATCA 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 TGCTCTGTGGTGTCCCACCATTTTGGGCCGAGACTGAGCAAGGGGTGGCTCAGGCGATCA 871
Query 978 TTAGGTCAGTTATCGACTTTAAGAGGGATCCATGGCCGAGAGTTTCTGAGACTGCCAAAG 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 872 TTAGGTCAGTTATCGACTTTAAGAGGGATCCATGGCCGAGAGTTTCTGAGACTGCCAAAG 931
Query 1038 ACCTTGTAAGGAAGATGCTCGAACCTGACCCCAAAAAACGGCTTTCTGCTGCACAAGTAC 1097
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 932 ACCTTGTGAGGAAGATGCTCGAACCTGACCCCAAAAAACGGCTTTCTGCTGCACAAGTAC 991
Query 1098 TCGAACATTCTTGGATACAAAATGCAAAGAAGGCTCCAAATGTTTCACTCGGCGAGACGG 1157
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 992 TCGAACATTCTTGGATACAAAATGCGAAGAAGGCTCCAAATGTTTCACTCGGCGAGACGG 1051
Query 1158 TGAAAGCAAGACTCAAACAGTTTTCTGTTATGAACAAGCTCAAGAAAAGAGCGCTACGGG 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 TGAAAGCAAGACTCAAACAGTTTTCTGTTATGAACAAGCTCAAGAAAAGAGCGCTACGGG 1111
Query 1218 TGATAGCCGAACACTTATCAGTGGAGGAAGTAGCTGGCATTAAGGAAGCATTTGAGATGA 1277
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1112 TGATAGCCGAACACTTATCAGTGGAGGAAGTAGCTGGCATCAAGGAAGCATTTGAGATGA 1171
Query 1278 TGGACAGTAAAAAGACGGGAAAGATAAACCTCGAGGAGCTTAAATTTGGACTTCATAAAC 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 TGGACAGTAAAAAGACGGGAAAGATAAACCTCGAGGAGCTTAAATTTGGACTTCATAAAC 1231
Query 1338 TTGGACAGCAGCAGATACCTGATACTGATCTACAGATCCTGATGGAAGCTGCTGATGTAG 1397
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1232 TCGGACAGCAGCAGATACCTGATACTGATCTACAGATTCTGATGGAAGCTGCTGATGTTG 1291
Query 1398 ATGGGGATGGAACTTTAAATTATGGCGAGTTTGTGGCTGTCTCCGTGCATCTTAAGAAAA 1457
|||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1292 ATGGGGATGGGACTTTAAATTATGGGGAGTTTGTGGCTGTCTCTGTGCATCTTAAGAAAA 1351
Query 1458 TGGCGAACGACGAACACTTGCATAAGGCTTTTAGCTTTTTTGACCAGAATCTGAGCAATT 1517
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1352 TGGCGAACGACGAACACTTGCATAAGGCTTTTAGCTTTTTTGACCAGAATCAGAGCGATT 1411
Query 1518 ACATAGAGATTGAGGAGCTTCGTGAGGCTTTAAATGATGAGGTAGATACTAGCAGTGAAG 1577
||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1412 ACATAGAGATTGAGGAGCTGCGTGAGGCTTTAAATGATGAGGTGGATACTAACAGTGAAG 1471
Query 1578 AAGTTGTTGCAGCTATCATGCAAGATGTTGACACAGACAAGGATGGACGAATAAGCTATG 1637
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1472 AAGTTGTTGCAGCTATTATGCAAGATGTTGACACAGACAAGGACGGACGAATAAGCTATG 1531
Query 1638 AAGAGTTTGCGGCAATGATGAAAGCTGGAACGGACTGGAGGAAAGCGTCGAGGCAGTATT 1697
||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1532 AAGAGTTTGCGGCGATGATGAAAGCTGGAACAGATTGGAGGAAAGCGTCGAGGCAGTATT 1591
Query 1698 CCCGGGAAAGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGAAGGTTCATTGCAATTAG 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 CCCGGGAAAGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGAAGGTTCATTGCAATTAG 1651
Query 1758 AAGGCGAGAATTGAGAAAGGATCTT-GTTTCTGTATCTCTTAAAGAATTaaaaagaaaa- 1815
||||||| |||| ||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct 1652 AAGGCGAAAATTAAGAAAGGTTCTTTGTTTCTGTATCTCTTAAAGAAGTAAAAAGAAAAA 1711
Query 1816 g-aaaaaaCAGTATTCTTTGAAAATTGTT-ATCttttttttttttCCTCAATAATTGTAG 1873
| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1712 GGAAAAAACAGTATTCTTTGAAAATTGTTTATCTTTTTTTTT---CCTCAATAATTGTAG 1768
Query 1874 ATCAGGGTTTCCAAATTTTTTAGTTACTTGAATAGCCAGCCATGTACGATATGAAG-ATG 1932
||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1769 ATCAGGGTTTC-AAATGTTTTAGTTACTTGAATAGCCAGCCATGTACGATATGAAGCA-G 1826
Query 1933 ATGTTCTAAAATTTTCTGACTCTTTATTTTTCATGTTGTCTGGATCCTTAATA-T-TT-G 1989
||||||| |||||||||||||||||||||| |||||||||||||||||||||| | || |
Sbjct 1827 ATGTTCTTAAATTTTCTGACTCTTTATTTT-CATGTTGTCTGGATCCTTAATACTATTTG 1885
Query 1990 TTGGCAAACAATA 2002
|||||||||||||
Sbjct 1886 TTGGCAAACAATA 1898
> AT5G12480.1 | Symbols: CPK7 | calmodulin-domain protein kinase
7 | chr5:4047515-4050533 REVERSE LENGTH=2116
Length=2116
Score = 1742 bits (943), Expect = 0.0
Identities = 1378/1587 (87%), Gaps = 33/1587 (2%)
Strand=Plus/Plus
Query 208 GAGT-AAGAATGGGAAACCAAAGATCAAAAGTAACCCGTTTTACAGCGAGGCATACACTA 266
|||| || || |||||||| |||| ||||| || || ||||||||| | | |||| |||
Sbjct 248 GAGTAAACAA-GGGAAACCCAAGAACAAAAACAATCCTTTTTACAGCAATGAATACGCTA 306
Query 267 C-A-A-ATGGATCTGGAACTGGCTTCAAGCTCTCTGTTTTGAAAGATCCAACAGGGCATG 323
| | | || |||||||| |||| || ||||||||||| |||||||||| ||||| ||||
Sbjct 307 CAACAGATAGATCTGGAGCTGGTTTTAAGCTCTCTGTGCTGAAAGATCCTACAGGACATG 366
Query 324 ATATATCTCTT--ATGTATGATCTGGGGCGTGAGGTTGGTCGCGGAGAGTTTGGTATTAC 381
||||||| ||| | ||||||||| || |||||||||||||| || ||||||||||| ||
Sbjct 367 ATATATC-CTTGCA-GTATGATCTTGGACGTGAGGTTGGTCGAGGCGAGTTTGGTATAAC 424
Query 382 ATACTTGTGCACTGATATCAAAACGGGTGAGAAGTATGCGTGCAAGTCTATATCAAAGAA 441
|||||||| ||||||| |||| |||||||||||||| |||||||| ||||| |||||
Sbjct 425 TTACTTGTGTACTGATAAGGAAACTGGTGAGAAGTATGCCTGCAAGTCCATATCTAAGAA 484
Query 442 GAAGCTTAGAACAGCTGTGGATATAGAGGATGTTAGGAGGGAAGTTGAGATAATGAAGCA 501
|||||| |||||||| || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct 485 GAAGCTGAGAACAGCAGTTGATATAGAGGATGTTAGGAGGGAGGTTGAGATTATGAAGCA 544
Query 502 TATGCCTAAGCACCCGAATATCGTGTCGCTCAAGGATGCCTTTGAGGACGATGATGCAGT 561
||||||||| ||||| ||| |||| || | |||||| |||||||||| |||||||| ||
Sbjct 545 TATGCCTAAACACCCAAATGTCGTCTCTTTGAAGGATTCCTTTGAGGATGATGATGCGGT 604
Query 562 GCATATAGTTATGGAGTTGTGTGAAGG-GGGTGAGCTGTTTGATCGGATTGTTGCAAGAG 620
||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct 605 GCATATAGTTATGGAGTTGTGTGAAGGAGGG-GAACTGTTTGATCGGATTGTTGCAAGAG 663
Query 621 GTCATTACACTGAACGAGCTGCTGCTGCAGTAATGAAAACTATTCTTGAAGTTGTTCAGA 680
||||||||||||| || ||||||||||| || ||||| |||||| |||||||||||||||
Sbjct 664 GTCATTACACTGAGCGGGCTGCTGCTGCGGTTATGAAGACTATTGTTGAAGTTGTTCAGA 723
Query 681 TATGCCATAAGCATGGAGTGATGCATCGGGATCT-AAAGCCGGAGAACTTTCTCTTTGCA 739
||||||||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||
Sbjct 724 TATGCCATAAGCAAGGAGTGATGCATCGGGATCTCAAA-CCAGAGAACTTTCTTTTTGCA 782
Query 740 AATAAAAAAGAGACATCAGCCCTTAAAGCCATAGACTTTGGATTATCAGTCTTCTTCAAG 799
||||| |||||||||||||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 783 AATAAGAAAGAGACATCAGCCCTTAAGGCCATTGATTTTGGATTATCTGTATTCTTCAAA 842
Query 800 CCTGGTGAGG-GATTCAACGAGATTGTTGGAAGTCCTTATTACATGGCACCAGAGGTACT 858
||||||||| | || || |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 843 CCTGGTGAGCAGTTT-AATGAGATTGTTGGAAGTCCTTATTACATGGCACCCGAGGTGCT 901
Query 859 GAGGCGAAATTATGGACCTGAGGTTGATATCTGGAGTGCTGGAGTTATCCTTTATATCCT 918
| ||||||| ||||| |||||| | ||| | ||||| |||||||||||||| ||||||||
Sbjct 902 GCGGCGAAACTATGGTCCTGAGATCGATGTGTGGAGCGCTGGAGTTATCCTCTATATCCT 961
Query 919 GCTCTGTGGTGTCCCACCATTTTGGGCCGAGACTGAGCAAGGGGTGGCTCAGGCGATCAT 978
|| |||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 962 ACTTTGTGGTGTTCCGCCATTTTGGGCAGAGACTGAGCAAGGGGTGGCTCAAGCGATCAT 1021
Query 979 TAGGTCAGTTATCGACTTTAAGAGGGATCCATGGCCGAGAGTTTCTGAGA-CTGCCAAAG 1037
||| |||||||| ||||||||||| ||||||||||| ||||||||||| | | |||||||
Sbjct 1022 TAGATCAGTTATTGACTTTAAGAGAGATCCATGGCCAAGAGTTTCTGACAGC-GCCAAAG 1080
Query 1038 ACCTTGTAAGGAAGATGCTCGAACCTGACCCCAAAAAACGGCTTTCTGCTGCACAAGTAC 1097
||||||| || |||||||| |||||||| ||||||||||||||| ||||||||||||| |
Sbjct 1081 ACCTTGTGAGAAAGATGCTTGAACCTGATCCCAAAAAACGGCTTACTGCTGCACAAGTTC 1140
Query 1098 TCGAACATTCTTGGATACAAAATGCAAAGAAGGCTCCAAATGTTTCACTCGGCGAGACGG 1157
|||||||| ||||||||| ||||||||||||||||||||||| || || || ||||| |
Sbjct 1141 TCGAACATACTTGGATACTGAATGCAAAGAAGGCTCCAAATGTCTCTCTTGGGGAGACTG 1200
Query 1158 TGAAAGCAAGACTCAAA-CAGTTTTCTGTTATGAACAAGCTCAAGAAAAGAGCGCTACGG 1216
||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||
Sbjct 1201 TGAAAGCAAGACT-AAAGCAGTTTTCTGTTATGAACAAGCTCAAGAAACGAGCTCTACGA 1259
Query 1217 GTGATAGCCGAACACTTATCAGTGGAGGAAGTAGCTGGCATTAAGGAAGCATTTGAGATG 1276
|||||||| ||||| || ||||||||||||| ||| || || |||||||||||||| |||
Sbjct 1260 GTGATAGCTGAACATTTGTCAGTGGAGGAAGCAGCAGGGATAAAGGAAGCATTTGAAATG 1319
Query 1277 ATGGACAGTAAA-AAGACG-GGAAAGATAAACCTCGAGGAGCTTAAATTTGGACTTCATA 1334
|||||| ||||| |||| | || |||||||| |||||||||||||||| ||||||||| |
Sbjct 1320 ATGGAC-GTAAACAAGA-GAGGCAAGATAAATCTCGAGGAGCTTAAATATGGACTTCAAA 1377
Query 1335 AA-CTTGGACAGCAGCAGATACCTGATACTGATCTACAGATCCTGATGGAAGCTGCTGAT 1393
|| || ||||| | |||||| ||||||||||||| || || || ||||||||| |||||
Sbjct 1378 AAGCT-GGACA--A-CAGATAGCTGATACTGATCTTCAAATTCTTATGGAAGCTACTGAT 1433
Query 1394 GTAGATGGGGATGGAACTTTAAATTATGGCGAGTTTGTGGCTGTCTCCGTGCATCTTAAG 1453
|| ||||||||||| || | || ||| |||||||||| ||||| || || || ||||||
Sbjct 1434 GTTGATGGGGATGGGACACTGAACTATAGCGAGTTTGTTGCTGTTTCAGTCCACCTTAAG 1493
Query 1454 AAAATGGCGAACGACGAACACTTGCATAAGGCTTTTAGCTTTTTTGACCAGAATCTGAGC 1513
|| |||||||| || |||||||||||||| ||||||| ||| ||||| ||||| | |||
Sbjct 1494 AAGATGGCGAATGATGAACACTTGCATAAAGCTTTTAACTTCTTTGATCAGAACCAGAGT 1553
Query 1514 AATTACATAGAGATTGAGGAGCTTCGTGAGGCTTTAAATGATGA---GG-TAGATACTAG 1569
||||||||||||||| || |||||||| || || |||||||| || || |||||||
Sbjct 1554 GGTTACATAGAGATTGACGAACTTCGTGAAGCCTTGAATGATGAATTGGATA-ATACTAG 1612
Query 1570 CAGTGAAGAAGTTGTTGCAGCTATCATGCAAGATGTTGACACAGACAAGGATGGACGAAT 1629
|||||| ||||| | ||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 1613 CAGTGAGGAAGTAATCGCAGCCATCATGCAAGATGTTGATACCGACAAGGATGGACGAAT 1672
Query 1630 AAGCTATGAAGAGTTTGCGGCAATGATGAAAGCTGGAACGGACTGGAGGAAAGCGTCGAG 1689
||||||||||||||||| || |||||||||||||| || || ||||| |||||||| ||
Sbjct 1673 AAGCTATGAAGAGTTTGTTGCGATGATGAAAGCTGGGACAGATTGGAGAAAAGCGTCAAG 1732
Query 1690 GCAGTATTCCCGGGAAAGATTCAACAGTTTGAGCCTCAAGTTAATGAGAGAAGGTTCATT 1749
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1733 ACAGTATTCTCGGGAAAGATTCAACAGTTTAAGCCTCAAGTTAATGAGAGATGGTTCATT 1792
Query 1750 GCAATTAGAAGGCGAGAATTGAGAAAG 1776
||||||||||||||||| | ||||||
Sbjct 1793 GCAATTAGAAGGCGAGACCTAAGAAAG 1819
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99196276920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5