BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488841 Length=1807 Score E Sequences producing significant alignments: (Bits) Value AT5G19485.1 | Symbols: | transferases;nucleotidyltransferases ... 2630 0.0 > AT5G19485.1 | Symbols: | transferases;nucleotidyltransferases | chr5:6573592-6576490 REVERSE LENGTH=1824 Length=1824 Score = 2630 bits (1424), Expect = 0.0 Identities = 1711/1841 (93%), Gaps = 53/1841 (3%) Strand=Plus/Plus Query 1 AACGACCCGTCGGATCCAAAAGTAAGAGAGAAGCGGGTTTAATTGATA----C--CGTCT 54 |||||||||||||||||||||| |||| | ||||||||| |||||||| | ||||| Sbjct 3 AACGACCCGTCGGATCCAAAAGAAAGAAACAAGCGGGTTAAATTGATATCGTCTTCGTCT 62 Query 55 -TCG--TCT-AAAATCAAAA-CCC------CAGAAACCTCTCTTCTTCGTC-TC-CTCAT 101 || ||| |||||||||| ||| ||||||||||||||||||||| || ||| | Sbjct 63 ACCGTTTCTCAAAATCAAAACCCCAGAAAGCAGAAACCTCTCTTCTTCGTCTTCTCTCGT 122 Query 102 CAATTCAGTTGCGATAATGGATTTTCAGGTCGTGATTCTCGCCGGTGGATTCTCCAGTAA 161 |||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct 123 CAATTCAGCTGCGACAATGGATTTCCAGGTCGTGATTCTAGCCGGCGGATTCTCTAGTTA 182 Query 162 TCTTGTTCCCTTAGTCTCCAAGGAAGTTCCTAAGGCGTTGCTTCCGGTAGCGAATCGTCC 221 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 183 TCTTGTTCCCTTAGTCGCCAAGGAAGTTCCTAAGGCGTTGCTTCCCGTAGCGAATCGTCC 242 Query 222 GGTGTTATCTTTCGTTTTGGATCTGCTCGAGAGCAATAATCTCAAGGATCTGATCGTCGT 281 |||||| |||| |||| ||||||| |||||||| | |||||||||||||||||||||||| Sbjct 243 GGTGTTGTCTTACGTTCTGGATCTTCTCGAGAGTAGTAATCTCAAGGATCTGATCGTCGT 302 Query 282 TGTTGAAGGAGAAGATGCCGCATTGAAAGTTGGTGGATGGATATCTTCTGCTTGTGTTGA 341 ||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct 303 TGTTGAAGGGGAAGATGCTGCTTTGAAAGTTGGTGGATGGATTTCTTCTGCTTGTGTTGA 362 Query 342 TCGTTTACATGTTGAGGTTGCTGCTGTTGCTGAGAATGTTGGAACTGCTGGGGCACTCAG 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 TCGTTTACATGTTGAGGTTGCTGCTGTTGCTGAGAATGTTGGAACTGCTGGGGCACTCAG 422 Query 402 GGCAATTGCACACCACTTAACTGCCAAAGACATTTTGATTGTAAGTGGAGACATTGTTTC 461 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 423 GGCAATTGCACACCACTTAACTGCCAAAGACATTTTGATCGTAAGTGGAGACATTGTTTC 482 Query 462 TGATATTCCTCCTGGTGCTGTTGCCGCCACTCATAGAAGGCATGATGCAGCAGTCACTGT 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 483 TGATATTCCTCCTGGTGCTGTTGCCGCCACTCATAGAAGGCATGATGCAGCAGTGACTGT 542 Query 522 AATGCTTTGTGCTCAACCTGTCAGTGGGCCATCAGAATCCGGGGGTTCTGGTGGGAAAGA 581 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 543 TATGCTTTGTGCTCAACCTGTCAGTGGGCCATCAGAATCAGGAGGTTCTGGTGGGAAAGA 602 Query 582 TAAAACCAAAAAACCTGCTTGCGATGATATCATAGGGCTTGATTCCTTGAAACAATTCTT 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 603 TAAAACCAAAAAACCTGCTTGCGATGATATCATAGGGCTTGATTCCTTGAAACAGTTCTT 662 Query 642 GTTATACATAGCCAAAGGGGCTGAGATTAAGAAAGATACGCGAGTAAAAAAGAGCATTCT 701 |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 663 GTTATACATAGCCAAAGGTACTGAGATTAAGAAAGATACCCGAGTAAAAAAGAGCATTCT 722 Query 702 CTGTGCGGCTGGCAAGATGGAAATTCGATCAGATCTGATGGATTCTCATATATATGCCTT 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 723 CTGTGCGGCTGGCAAGATGGAAATTCGATCAGATCTGATGGATTCTCATATATATGCCTT 782 Query 762 CAAGAGATCAGTTCTGCAGGAAGTTTTGGATCAAAAACCTGCTTTTCGGAGCCTAAAAGA 821 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 783 CAAGAGAGCAGTTCTGCAGGAAGTTTTGGATCAAAAACCTGCTTTTAGGAGCCTAAAACA 842 Query 822 GGATGTACTACCATATCTTGTTCGTACACAGCTGAGATCAGA-GATCTTCTCTGACCAAA 880 |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 843 GGATGTACTACCGTATCTTGTTCGTACACAGCTGAGATCAGATG-TCTTCTCTGACCAAA 901 Query 881 ATAATGTAGAAGAAAACGGAAATGGAAATGGAAAGAATAATATGCAGAACAACGAGGTGG 940 ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct 902 GTAATGTAGAAGAAAATGGGAATGGAAATGGAAAAAATAATATGCAGAACAACGAGGTGG 961 Query 941 TCTTGTCTCAAATTCTCTCCAACGCATCTTTGCCAAGCTTTCATCAAGTCTATGAATCAG 1000 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 962 TCTTGTCTCAAATTCTCTCCAACGCATCCATGCCAAGCTTTCATCAAGTCTATGAATCAG 1021 Query 1001 GTCTTGATAGCCGAAAAACCAATAAATGCTGTGTTTATATAGCGGATGAAAGTAAATATT 1060 |||| | || ||| |||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 1022 GTCTGGGTACCCGGAAAACCCATAAATGCTGTGTTTATATAGCGGATGAAAGTAAGTATT 1081 Query 1061 TCGTCCGCTTGAATAGCATTCAAGCCTTTATGGACGTAAACAGAGATGTTATTGGTG-AT 1119 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 1082 TCGTCCGCTTGAATAGCATTCAAGCCTTCATGGACGTAAACAGAGATGTTATTGGTGAAT 1141 Query 1120 GCAAACCACCTATCTGGATACTCCTTTTCTGCTCATCACAACATTGTCCACCCATCAGCT 1179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1142 -CAAACCACCTATCTGGATACTCCTTTTCTGCTCATCACAACATTGTCCACCCATCAGCT 1200 Query 1180 GAGCTTGGATCGAAAACCACAGTTGGACCTCATTGTATGCTTGGAGAAGGCTCTCAAGTC 1239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 GAGCTTGGATCGAAAACCACAGTTGGACCTCATTGTATGCTTGGAGAAGGCTCTCAAGTC 1260 Query 1240 GGTGATAAATGCAGTGTCAAAAGATCTGTAATTGGGAGACATTGCCGGATAGGCTCCAAT 1299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 GGTGATAAATGCAGTGTCAAAAGATCTGTAATTGGGAGACATTGCCGGATAGGCTCCAAT 1320 Query 1300 GTGAAGATTGTTAATTCAGTTGTGATGGACCATGCCACAATTGGAGACGGATGTTCAATA 1359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 GTGAAGATTGTTAATTCAGTTGTGATGGACCATGCCACAATTGGAGACGGATGTTCAATA 1380 Query 1360 CAGGGCTCAGTCATTTGCAGTAACGCACAACTTCAAGAGCGTGTTACTCTGAGAGACTGC 1419 || ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct 1381 CAAGGCTCAGTCATTTGCAGCAACGCACAGCTTCAAGAGCGTGTTACTCTAAGAGACTGC 1440 Query 1420 CAAGTGGAAGCAGGGTATGTAGTTTGTGCCGGGAGTGAGCACAAGGGAGAGACCTTTGCT 1479 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1441 CAAGTGGAAGCAGGGTATGTTGTTTGTGCCGGGAGTGAGCACAAAGGAGAGACCTTTGCT 1500 Query 1480 AGAAAATGAAAAGGAAGGTTAAGCATATGAATGAGGAGGTCACATCTTGGAAC--TTTTT 1537 |||||||||||||||||| |||||| | | ||||| |||||||||||||| ||||| Sbjct 1501 AGAAAATGAAAAGGAAGGATAAGCA-A--A-TGAGG---TCACATCTTGGAACGCTTTTT 1553 Query 1538 CAA--TGAAAAGCAGCATTTCTTAGTCGTTCGTTTGGTATGAGAGAAGAGTGTGAAGGAT 1595 || |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct 1554 TAAAATGAAAAGCAGCATTACTTAGTCATTCGTTTGGTAGGAGAGAAGAGTGTGAAGGAT 1613 Query 1596 TGGAAAGTTCCCCACCCTAAGGGTTTTGTACTTTAGTTGATTAAAAGTTTGAGATTTTCC 1655 ||||||||| ||||| |||||||||||| | | ||||| ||||||||||||||| Sbjct 1614 TGGAAAGTTTCCCAC--TAAGGGTTTTGT--T---G---ATTAAGAGTTTGAGATTTTCC 1663 Query 1656 GTTAGTATGTTTTGCTGATAGAGTTTAATCTTTTACTGTTCATTACATATATATGACGTT 1715 |||||||| |||| |||||||||||| ||||||| || ||||||||||||| |||| || Sbjct 1664 GTTAGTATCTTTTACTGATAGAGTTTGATCTTTTGCTATTCATTACATATACATGAAGTC 1723 Query 1716 TTGAAACTCTTTGTCAGCCACTGACCCTTC-CTCTCT-CCGTTGGTT-T-TC-C-T--GT 1767 ||||||| |||||||||||||||||||||| |||| | ||||||||| | | | | || Sbjct 1724 TTGAAACACTTTGTCAGCCACTGACCCTTCTCTCTGTTCCGTTGGTTATATTACATATGT 1783 Query 1768 CtttttttGTTCTCCTCATTGTT-ACTCTTTTGTTCGAGAT 1807 ||||||||||||| |||||| || ||||||||||||||||| Sbjct 1784 CTTTTTTTGTTCTTCTCATTATTTACTCTTTTGTTCGAGAT 1824 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89407170645 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5