BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488935
Length=3541
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20280.1 | Symbols: ATSPS1F, SPS1F | sucrose phosphate synth... 5548 0.0
AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2, SPS2F | sucrose pho... 859 0.0
> AT5G20280.1 | Symbols: ATSPS1F, SPS1F | sucrose phosphate synthase
1F | chr5:6844714-6850154 REVERSE LENGTH=3569
Length=3569
Score = 5548 bits (3004), Expect = 0.0
Identities = 3357/3526 (95%), Gaps = 30/3526 (1%)
Strand=Plus/Plus
Query 2 TTCGTGACTAACCCCACCACACACAGTCCAGCAGAGTCCCTTTGTCGTCTATCAAA--AT 59
||||| |||||||||||||| |||| |||||| |||| |||||||||||||||||| |
Sbjct 6 TTCGTCACTAACCCCACCAC-CACACTCCAGCTGAGT-CCTTTGTCGTCTATCAAACCAG 63
Query 60 CAAAA-GGTACGAGATTCAATCATCTCCAATCCCAAAACTCCACTTCTGTCCACAAAAC- 117
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 64 AAAAAGGGTACGAGATTCAATCATCTCCAATCCCAAAATTCCACTTCTGTCCACAAAACA 123
Query 118 CAAAG-TACTTCTCGATCTTCGATCGTCCCACCAGATGGCCGGGAACGACTGGGTAAACA 176
||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 124 CAAAGCGA-TTCTCGATCTTTGATCGTCCCACCAGATGGCCGGGAACGATTGGGTAAACA 182
Query 177 GTTACTTGGAGGCGATTCTCGACGTTGGCCAGGGACTTGACGATGCTCGCTCTTCGCCAT 236
||||||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||
Sbjct 183 GTTACTTAGAGGCGATTCTCGACGTCGGTCAGGGTCTTGACGATGCTCGCTCTTCTCCAT 242
Query 237 CGCTTCTTCTCAGGGAGAGAGGTCGATTCACTCCAAGCCGTTACTTTGTTGAGGAAGTCA 296
| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 243 CACTTCTTCTTAGGGAGAGAGGTCGATTCACTCCCAGCCGTTACTTTGTTGAGGAAGTTA 302
Query 297 TCACTGGTTACGATGAGACTGATCTTCATAGATCCTGGGTTAAGGCTGTTGCTACGAGGA 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TCACTGGTTACGATGAGACTGATCTTCATAGATCCTGGGTTAAGGCTGTTGCTACGAGGA 362
Query 357 GTCCACAGGAGAGGAACACGAGATTAGAGAATATGTGTTGGAGGATCTGGAATCTCGCTC 416
||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 363 GTCCACAAGAGAGGAACACGAGGTTAGAGAATATGTGTTGGAGGATCTGGAATCTTGCTC 422
Query 417 GTCAAAAGAAGCAGCATGAAGAAAAAGAAGCACAGAGGCTGGCTAAGCGCCGGCTTGAAC 476
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 423 GTCAAAAGAAGCAGCATGAGGAAAAAGAAGCACAGAGGCTGGCTAAGCGCAGGCTTGAAC 482
Query 477 GTGAGAAAGGTCGCAGTGAGGCAACAGCTGATATGTCTGAGGAGTTTTCTGAGGGAGAGA 536
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 483 GTGAGAAAGGTCGCAGAGAGGCAACAGCTGATATGTCTGAGGAGTTTTCAGAGGGAGAAA 542
Query 537 AAGGAGATATTATCAGTGATATCTCAACTCATGGTGAAAGCACCAAACCAAGGTTGCCCA 596
|||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 543 AAGGAGATATCATCAGTGATATATCTACTCATGGTGAAAGCACCAAACCAAGGTTGCCCA 602
Query 597 GAATTAATTCTGCTGACTCCATGGAGTTATGGGCAAGCCAACAGAAGGGAAATAAGCTCT 656
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 603 GAATTAATTCTGCTGAGTCCATGGAGTTATGGGCTAGCCAACAGAAGGGAAATAAGCTCT 662
Query 657 ATCTTGTTTTGATTAGTCTTCATGGTCTCATACGTGGTGAAAACATGGAGCTTGGTCGCG 716
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 663 ATCTTGTTTTGATTAGTCTTCATGGTCTCATACGTGGTGAAAACATGGAGCTCGGCCGCG 722
Query 717 ATTCTGATACCGGTGGCCAGGTTAAGTATGTTGTGGAACTTGCACGTGCATTGGGTTCAA 776
| ||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct 723 ACTCTGACACCGGTGGACAGGTTAAATATGTTGTGGAACTTGCACGTGCACTGGGTTCAA 782
Query 777 TGCCAGGAGTTTATAGGGTTGACTTGCTTACTAGACAAGTGTCTTCCCCAGATGTTGACT 836
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 783 TGCCAGGAGTTTATAGGGTTGACTTGCTTACTAGACAAGTGTCTTCACCAGATGTTGACT 842
Query 837 ATAGTTATGGCGAACCGACAGAAATGCTGACTCCTAGAGATTCTGAAGATTTCTCGGACG 896
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 843 ATAGTTATGGTGAACCTACGGAAATGCTGACTCCTAGAGATTCTGAAGATTTCTCGGATG 902
Query 897 AGATGGGGGAGAGTAGCGGTGCTTATATTGTGAGGATACCATTTGGTCCAAAGGACAAGT 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 AGATGGGGGAGAGTAGCGGTGCTTATATTGTGAGGATACCATTTGGTCCAAAGGACAAGT 962
Query 957 ATATTCCAAAAGAACTTCTATGGCCTCACATTGCTGAATTCGTTGATGGTGCTATGAACC 1016
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||
Sbjct 963 ATATTCCAAAAGAACTTCTATGGCCTCACATTCCGGAATTTGTTGATGGTGCTATGAGCC 1022
Query 1017 ACATCATGCAAATGTCAAATGTTCTTGGTGAGCAAGTTGGTGTTGGGAAGCCTATTTGGC 1076
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1023 ACATCATGCAAATGTCAAATGTTCTCGGCGAGCAAGTTGGTGTTGGGAAGCCTATTTGGC 1082
Query 1077 CTGCTGCCATCCATGGACACTATGCTGATGCTGGTGATGCCACTGCTTTACTGTCTGGTG 1136
|| ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct 1083 CTTCTGCCATCCATGGACACTATGCTGATGCTGGTGATGCCACTGCCCTGCTGTCGGGTG 1142
Query 1137 CACTAAATGTGCCTATGCTCCTTACTGGCCACTCACTTGGTCGAGATAAATTAGAGCAGC 1196
|||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||
Sbjct 1143 CACTAAATGTGCCTATGCTCCTTACTGGTCACTCACTCGGGAGAGATAAATTGGAGCAGC 1202
Query 1197 TTTTGAGACAAGGCCGCCTTTCAAAAGAAGAAATAAATTCAACTTACAAGATTATGCGTC 1256
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1203 TTTTGAGACAAGGCCGCCTTTCAAAAGAAGAAATAAATTCAACGTACAAGATTATGCGTC 1262
Query 1257 GAATAGAGGGTGAGGAATTATCTCTTGATGTTTCTGAAATGGTAATAACTAGCACTCGAC 1316
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 GGATAGAGGGTGAGGAATTATCTCTTGATGTTTCTGAAATGGTAATAACTAGCACTCGAC 1322
Query 1317 AGGAGATCGATGAGCAATGGAGATTGTATGATGGTTTTGACCCCATATTGGAGCGCAAAT 1376
||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1323 AGGAGATTGATGAGCAATGGAGACTGTATGATGGATTTGACCCCATATTGGAGCGCAAAT 1382
Query 1377 TGCGAGCCAGAATCAAGCGGAATGTGAGCTGCTATGGGCGGTTCATGCCTCGCATGGTTA 1436
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1383 TGAGAGCCAGAATCAAGCGGAATGTGAGCTGCTATGGACGGTTCATGCCTCGCATGGTTA 1442
Query 1437 AAATTCCACCTGGGATGGAGTTCAATCATATTGTCCCACATGGTGGTGATATGGAAGACA 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 AAATTCCACCTGGGATGGAGTTCAATCATATTGTCCCACATGGTGGTGATATGGAAGACA 1502
Query 1497 CAGATGGGAACGAGGAACATCCAACTTCTCCAGATCCACCAATATGGGCTGAGATAATGC 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 CAGATGGGAACGAGGAACATCCAACTTCTCCAGATCCACCAATATGGGCTGAGATAATGC 1562
Query 1557 GTTTCTTTTCGAATTCTCGAAAGCCTATGATACTTGCCCTTGCGAGGCCCGACCCAAAAA 1616
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1563 GTTTCTTTTCGAATTCCCGAAAGCCTATGATACTTGCCCTTGCGAGGCCTGACCCAAAAA 1622
Query 1617 AGAACATCACGACGTTAGTGAAGGCATTTGGAGAATGTCGTCCACTGAGAGAGCTTGCTA 1676
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1623 AGAACATCACGACGTTAGTGAAGGCCTTTGGAGAATGTCGTCCACTGAGAGAGCTTGCTA 1682
Query 1677 ACCTGGCACTTATTATGGGTAACAGAGATGGGATTGATGAAATGTCGAGCACGAGTTCTT 1736
||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||
Sbjct 1683 ACCTGGCACTTATTATGGGCAACCGAGATGGGATTGATGAAATGTCGAGCACAAGTTCTT 1742
Query 1737 CTGTCCTTCTATCTGTTCTAAAGCTAATTGACAAGTATGATCTCTACGGTCAAGTTGCGT 1796
|||| || || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 CTGTTCTCCTTTCTGTTCTGAAGCTAATTGACAAGTATGATCTCTACGGTCAAGTTGCGT 1802
Query 1797 ACCCTAAACATCACAAACAGTCAGATGTTCCAGACATATATCGCCTTGCTGCAAAGTCAA 1856
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1803 ACCCTAAACATCACAAACAATCAGATGTTCCAGACATATATCGCCTAGCTGCAAAGTCAA 1862
Query 1857 AGGGTGTTTTCATCAATCCAGCTATCATTGAACCATTTGGACTTACAT-TAATTGAGGCT 1915
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1863 AGGGTGTTTTCATCAATCCAGCTATCATTGAACCATTTGGACTTAC-TCTAATTGAGGCT 1921
Query 1916 GCTGCTCATGGTTTACCTATGGTTGCTACAAAAAATGGTGGTCCTGTAGATATACACCGG 1975
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1922 GCAGCTCATGGTTTACCTATGGTTGCTACAAAAAATGGTGGTCCTGTAGATATTCACCGG 1981
Query 1976 GTCCTGGACAATGGTCTTCTTGTGGATCCTCATGATCAGCAATCTATTTCTGAAGCTCTT 2035
|||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1982 GTCCTGGATAATGGCCTTCTTGTGGATCCTCATGATCAGCAGTCTATTTCTGAAGCTCTT 2041
Query 2036 CTTAAGCTTGTTGCTGATAAGCACCTATGGGCAAAGTGTCGGCAAAACGGGTTGAAGAAC 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2042 CTTAAGCTTGTTGCTGATAAGCACCTATGGGCAAAGTGTCGGCAAAACGGGTTGAAGAAC 2101
Query 2096 ATTCACCAATTTTCTTGGCCAGAGCACTGCAAAACTTATCTATCTCGCATAACCAGCTTC 2155
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2102 ATTCACCAATTCTCTTGGCCAGAGCACTGCAAAACTTATCTATCTCGCATAACCAGCTTC 2161
Query 2156 AAACCAAGACATCCGCAGTGGCAAAGTGATGATGGCGGTGATAATTCAGAACCCGAGTCA 2215
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2162 AAACCAAGACATCCACAGTGGCAAAGTGATGATGGCGGTGATAATTCAGAACCCGAGTCA 2221
Query 2216 CCTAGTGATTCTTTGAGAGATATACAGGATATATCCTTGAACTTAAAGTTTTCATTTGAT 2275
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2222 CCTAGTGATTCTTTGAGGGATATACAGGATATATCCTTGAACTTAAAGTTTTCATTTGAT 2281
Query 2276 GGAAGTGG-ATACGATAATTACATGAACCAAGAAGCGAGCTCCATGGACAGGAAGAGCAA 2334
|||||||| | | |||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 2282 GGAAGTGGGA-ATGATAATTACATGAACCAAGAAGGGAGCTCCATGGATAGGAAGAGCAA 2340
Query 2335 AATCGAAGCTGCCGTTCAAAATTGGTCTAAAGGAAAAGATAGCCGCAAAATGGGTTCCCT 2394
|||||||||||| || ||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 2341 AATCGAAGCTGCTGTCCAAAATTGGTCTAAAGGCAAAGATAGCCGCAAAATGGGATCACT 2400
Query 2395 AGAGAAGTCAGAGGTTAACTCTGGAAAATTCCCAGCGGTGCGGAGAAGGAAGTTTATTGT 2454
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2401 GGAGAGGTCAGAGGTTAACTCTGGAAAATTCCCAGCAGTGCGGAGAAGGAAGTTTATTGT 2460
Query 2455 TGTTATTGCTCTTGATTTTGATGGGGAACAAGACACGCTAGAGGCTACAAAAAGAATTCT 2514
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2461 TGTTATTGCTCTTGATTTTGATGGGGAAGAAGACACGCTAGAGGCTACAAAAAGAATTCT 2520
Query 2515 AGATGCGGTTGAAAAGGAAAGAGCAGAAGGATCTGTTGGTTTCATACTGTCGACATCTCT 2574
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2521 TGATGCGGTTGAAAAGGAAAGAGCAGAAGGATCTGTTGGGTTCATACTGTCGACATCTCT 2580
Query 2575 AACGATCTCTGAGGTACAATCTTTCTTGGTGTCAGGGGGCTTAAACCCGAATGATTTCGA 2634
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2581 AACGATCTCTGAGGTACAATCTTTCTTGGTGTCAGGAGGCTTAAACCCGAATGATTTCGA 2640
Query 2635 CGCTTTCATATGCAACAGCGGAAGTGATCTCCACTACACATCCCTCAACAACGAAGACGG 2694
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2641 CGCTTTCATATGTAACAGCGGAAGTGATCTCCACTACACATCCCTCAACAACGAAGACGG 2700
Query 2695 TCCTTTTGTTGTTGA-TTTCTACTACCACTCCCACATAGAATATCGGTGGGGCGGTGAAG 2753
||||||||| || || ||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 2701 TCCTTTTGTCGTAGACTTT-TACTACCACTCCCACATAGAATATAGGTGGGGCGGTGAAG 2759
Query 2754 GGCTGAGGAAGACTTTGATCCGTTGGGCATCTTCACTTAACGAGAAAAAGGCTGACAATG 2813
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2760 GGCTGAGGAAGACTTTGATCCGTTGGGCATCTTCGCTTAACGAGAAAAAGGCTGACAATG 2819
Query 2814 ACGAGCAGATAGTCACCCTTGCTGAACATCTTTCAACTGACTACTGCTACACATTTACAG 2873
|||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2820 ACGAGCAGATTGTCACTCTTGCTGAGCATCTTTCAACTGACTACTGCTACACATTTACAG 2879
Query 2874 TCAAAAAGCCTGCAGCGGTACCTCCAGTAAGAGAGCTCCGGAAGCTGCTGAGAATCCAGG 2933
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2880 TCAAAAAGCCTGCAGCGGTACCTCCAGTAAGAGAGCTTAGGAAGCTGCTGAGAATCCAGG 2939
Query 2934 CTTTGCGTTGTCATGTAGTTTATAGTCAGAATGGCACCCGAATAAATGTCATACCGGTGC 2993
|||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2940 CTTTACGTTGCCATGTCGTTTATAGTCAGAATGGCACCCGAATAAACGTCATACCGGTGC 2999
Query 2994 TGGCTTCTCGTATACAAGCCCTGAGGTATTTGTTCGTTCGGTGGGGAATTGACATGGCGA 3053
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 3000 TGGCTTCTCGTATACAAGCTCTGAGGTATTTGTTCGTCCGGTGGGGAATTGACATGGCGA 3059
Query 3054 AAATGGCGGTATTTGTGGGCGAATCAGGTGACACTGATTACGAAGGATTGCTCGGAGGGC 3113
||||||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||
Sbjct 3060 AAATGGCGGTATTTGTGGGGGAATCAGGTGATACTGATTACGAAGGATTGCTTGGTGGGC 3119
Query 3114 TTCACAAGAGTGTTGTTCTAAAGGGAGTGTCTTGCAGCGCAAGCAACGCCTTGCACGCAA 3173
|||||||||| |||||||||||||||||||| ||||| ||| || |||||||| |
Sbjct 3120 TTCACAAGAGCGTTGTTCTAAAGGGAGTGTCGTGCAGTGCATGC------TTGCACGCTA 3173
Query 3174 ACCGGAGCTATCCTCTCACCGACGTGATCTCCTTGGAGAGCAGCAACGTGGTTCACGCAC 3233
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 3174 ACCGGAGCTATCCTCTCACCGACGTGATCTCCTTTGAGAGCAACAACGTGGTTCACGCAT 3233
Query 3234 CGCCAGATTCGGATGTTCGTGATGCCCTGAAGAAACTAGAGCTTCTCAAGGACTGAAACC 3293
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3234 CACCAGATTCGGATGTTCGTGATGCCCTGAAGAAATTAGAGCTTCTCAAGGACTGAAACC 3293
Query 3294 TAAAATAATAAGGCGATCATATCTACAGTCATCAATGG-TTGGTACCAAATGCCAACTAT 3352
|||||||| || |||||| |||| ||||||||||||| |||||||||||||| ||||||
Sbjct 3294 TAAAATAA-AA--CGATCACATCTCCAGTCATCAATGGGTTGGTACCAAATGCGAACTAT 3350
Query 3353 CTTTTTCATATTTGACCACATGGTTTGGTTTGTTT-ATTACTTCGTCGTACATAAGCTGC 3411
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3351 CTTTTTCATATT-GACCACATGGTTTGGTTTGTTTTATTACTTCGTCGTACATAAGCTGC 3409
Query 3412 CGGAAATACCTAACTCTTCATATGGTTGTCTTTTTGACACCCACCGGATTTTACTTAATT 3471
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct 3410 CGGAAATACCTAACTCTTCATATGGTTGTCTCTTTGACACCTACCGGATTTTACTTCATT 3469
Query 3472 TGTGCAA-GTATAATTGTAATAATAAAAAGAAAAAGAGAATATTCC 3516
| ||||| |||| | |||||||||||||||||||||| |||||||
Sbjct 3470 TATGCAAAGTAT--T-GTAATAATAAAAAGAAAAAGAGGATATTCC 3512
> AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2, SPS2F | sucrose phosphate
synthase 2F | chr5:3536226-3541133 FORWARD LENGTH=3576
Length=3576
Score = 859 bits (465), Expect = 0.0
Identities = 1550/2060 (75%), Gaps = 129/2060 (6%)
Strand=Plus/Plus
Query 275 CGTTACTTT-GTTGAGGAAGTCATCACTGG-TTACGATGAGACTGATCTTCATAGATCCT 332
||||| ||| ||||| || || ||||| || || ||||||||||||||||| | ||||
Sbjct 342 CGTTA-TTTCGTTGAAGAGGTTATCACAGGCTT-TGATGAGACTGATCTTCACCGTTCCT 399
Query 333 GGGTTAAGGCTGTTGCTACGAGGAGTCCACAGGAGAGGAACACGAGATTAGAGAATATGT 392
||||| |||||| ||| || |||||||| || ||| | ||||| || || |||||| |||
Sbjct 400 GGGTTCAGGCTGCTGCAACCAGGAGTCCGCAAGAGCGTAACACAAGGTTGGAGAATTTGT 459
Query 393 GTTGGAGGATCTGGAATCTCGCTCGTCAAAAGAAGCAGCATGAAGAAAAAGAA-GCACAG 451
| ||||||||||||||| | ||||| || ||||||||| ||||| ||||| || |
Sbjct 460 GCTGGAGGATCTGGAATTTGGCTCGCCAGAAGAAGCAGGTTGAAG-GGAAGAATGC-TA- 516
Query 452 AGGC-TG--GCTAAGCGCCG-GCTTGAACGTGAGAAAGGTCGCAGTGAGGCAACAGCTGA 507
| || || ||||| | | || ||| |||||||||| | || || | ||| |||||
Sbjct 517 A-GCGTGAAGCTAAAAG-GGAGCGTGAGCGTGAGAAAGCAAGGAGGGAAGTAACTGCTGA 574
Query 508 TATGTCTGAGGAGTTT-TCTGAGGGAGAGAAAGG-AGATATTATC-AGTGATATCTCAAC 564
|||||||| || ||| ||||| |||||| |||| |||| || | |||| ||| ||||
Sbjct 575 AATGTCTGAAGA-TTTCTCTGAAGGAGAG-AAGGCAGAT-TTGCCTGGTGAAATCCCAAC 631
Query 565 TCATGGTG--AA-AGCACCAAACCAAGGTTG-CCCAGAATTAATTCTGCTGACT-CCATG 619
|| | ||| || | ||||||| ||| || | | | |||| ||||| ||| | | |
Sbjct 632 TCCTAGTGATAACAACACCAAAGGAAGAATGTCTC-GGATTAGTTCTGTTGA-TGTCTTT 689
Query 620 GAGTTATGGGCAAGC-CAACA-GAAGGGAAATAAGCTCTATC-TTGTTTTGATTAGTCTT 676
||| || || || ||||| ||| |||| ||||| || | | || || || ||||||
Sbjct 690 GAG-AATTGGTTTGCTCAACACAAAGAGAAA-AAGCTTTA-CATCGTGTTAATAAGTCTT 746
Query 677 CATGGTCTCATACGTGGTGAAAACATGGAGCTTGGTCGCGATTCTGATACCGGTGGCCAG 736
|||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 747 CATGGTTTGATACGTGGTGAAAACATGGAGCTTGGTCGCGATTCTGATACTGGTGGCCAG 806
Query 737 GTTAAGTATGTTGTGGAACTTGCACGTGCATTGGGTTCAATGCCAGGAGTTTATAGGGTT 796
|| ||||||||||||||||||||| | ||||| || |||||||||||||| ||| | |||
Sbjct 807 GTGAAGTATGTTGTGGAACTTGCAAGGGCATTAGGCTCAATGCCAGGAGTCTATCGTGTT 866
Query 797 GACTTGCTT-ACTAGACAAGTGTCTTC-C-CCAGATGTTGACTATAGTTA-TGGCGAACC 852
|| ||| || || ||||| | ||| | | |||||||| || | || || | |||||
Sbjct 867 GATTTG-TTGACCAGACA-G-GTCACCGCGCCAGATGTGGATTCCAGCTACTCT-GAACC 922
Query 853 GACAGAAATGCTGACTCCTAGAGATTCTGAAGATTTCTCGGACGAGA-TGGGGGAGAGTA 911
| | || ||| | | ||||| ||| | | ||| | | | |||| ||| | ||||||
Sbjct 923 GTCTGAGATGTTAAATCCTATAGACAC--A-GATATAGAGCAGGAGAATGGAG-AGAGTA 978
Query 912 GCGGTGCTTATATTGTGAGGATACCATTTGGTCC-AAAGGACAAGTATATTCCAAAAGAA 970
| || |||||||| | | || || ||||| || |||| | || ||| | ||||||||
Sbjct 979 GTGGCGCTTATATAATCCGTATTCCTTTTGGCCCGAAAG-ATAAATATGTACCAAAAGAG 1037
Query 971 CTTCTATGGCCTCACATTGCTGAATTCGTTGAT-GGTGCTA-TGAACCACATCATGCAAA 1028
|| || |||||||| || ||||||| |||||| || || | | | ||| || ||||| |
Sbjct 1038 CTCCTCTGGCCTCATATCCCTGAATTTGTTGATAGG-GC-ACTTAGCCATATTATGCAGA 1095
Query 1029 TGTCAAATGTTCTTGGTGAGCAAGTTGGTGTTGGG-AAGCCTATT-TGGCCTGCTGCCAT 1086
| ||||| ||||||||||||||| |||||| ||| || | | | ||||| | | | ||
Sbjct 1096 TTTCAAAGGTTCTTGGTGAGCAAATTGGTGGTGGACAA-CA-AGTATGGCCAGTTTCTAT 1153
Query 1087 CCATGGACACTATGCTGATGCTGGTGATGCCACTGCT-TTACTGTCTGGTGCACTAAATG 1145
|| || || ||||| |||||||||||| |||||||| || | ||||| || || ||||
Sbjct 1154 TCACGGGCATTATGCAGATGCTGGTGATTCCACTGCTCTTT-TATCTGGGGCTCTGAATG 1212
Query 1146 TGCCTATGCTCCTTACTGGCCACTCACTTGGTCGAGATAAA-TTAGAGCAGCTTTTGAGA 1204
| || ||| | ||||||| || || |||||||| ||||| || ||||| || ||| |
Sbjct 1213 TACCAATGGTTTTTACTGGGCATTCTCTTGGTCGTGATAAGCTT-GAGCAACTCCTGAAA 1271
Query 1205 CAAGGCCGCCTTTCAAAAGAAGAAATAAATTC-AACTTACAAGATTATGC-GTCGAATAG 1262
||||| || | ||||||||||||| ||||| |||| ||||||| ||| | || ||||
Sbjct 1272 CAAGGACGGC---CAAAAGAAGAAATCAATTCCAACT-ACAAGAT-ATGGAGACGGATAG 1326
Query 1263 AGGGTGAGGAATTATCTCTTGATGTTTCTGAAATGGTAATAACTAGCACTCGACAGGAGA 1322
||| ||||| |||| |||||||| |||||| || || |||||||| || | || |||
Sbjct 1327 AGGCAGAGGAGTTATGTCTTGATGCTTCTGAGATTGTCATAACTAGTACAAGGCAAGAGG 1386
Query 1323 TCGATGAGCAATGGAGA-TTGTATGATGGTTTTGACCCCATATTGGAGCGCAAATTGC-G 1380
| || ||||||||| | || |||||||||||||| || | |||||||| ||| | | |
Sbjct 1387 TAGACGAGCAATGGCGCCTT-TATGATGGTTTTGATCCGGTTTTGGAGCGAAAACT-CAG 1444
Query 1381 AGCCAGAATCAAGCGGAATGTGAGCTG-CTATGGGCGG-TTCATGCCTCGCATGGTTAAA 1438
||| ||||| || || |||||| || ||| || | | || |||||||||||||||
Sbjct 1445 AGCAAGAATGAAAAGGGGTGTGAGTTGTCTA-GG-CAGATTTATGCCTCGCATGGTTGTT 1502
Query 1439 ATTCCACCTGGGATGGAGTT-CAATCATATTGTCCCACATGGTGGTGATATGGAAGACAC 1497
||||| || || ||||| || || ||| ||||| ||||||| || || ||| | ||
Sbjct 1503 ATTCCTCCAGGAATGGAATTTCA-TCACATTGTACCACATGATG-TGG-ATGCA-GATGG 1558
Query 1498 AGATGGGAACGAGGAACATCCA-ACTTCTCCAGATCCACCAATATGGGCTGAGATAATGC 1556
||||| | || || ||||| | || | ||||||||||| ||| ||||||| ||||
Sbjct 1559 AGATG--AT-GA--AA-ATCCACAAA-CTGCTGATCCACCAATTTGGTCTGAGATTATGC 1611
Query 1557 GTTTCTTTTCGAATTCTCGAAAGCCTATGATACTTGCCCTTGCGAGGCCCGACCCAAAAA 1616
| ||||| || || | || ||||||||||| || || ||||| |||| ||||| ||||
Sbjct 1612 GCTTCTTCTCTAACCCGCGCAAGCCTATGATTCTCGCTCTTGCTCGGCCAGACCCTAAAA 1671
Query 1617 AGAACATCACGACGT-TAGTGAAGGCATTTGGAGAATGTCGTCCACTGA-GAGAGCTTGC 1674
||||| | || | |||| || || ||||||||||| |||||| | | | ||||||||
Sbjct 1672 AGAACTTGGTTAC-TCTAGTCAAAGCCTTTGGAGAATGCCGTCCATT-ACGGGAGCTTGC 1729
Query 1675 TAACCTGGCACTT-ATTATGGGTAA-CAGAGATGGGATTGATGAAATGTCGAGCACGAGT 1732
||||| || || || ||||| || | || ||| |||||||| |||| ||||| |
Sbjct 1730 GAACCTTACA-TTGATAATGGGAAATC-GAAATGATATTGATGAGTTGTCCTCCACGAAT 1787
Query 1733 TCTTCTGTCCTTCTATCTGTTCTAAAGCTAATTGACAAGTATGATCTC-TACGGTCAAGT 1791
|| ||||| || || || |||| |||||||| |||||||| || || |||||||||||
Sbjct 1788 TCCTCTGTGCTGCTCTCAATTCTGAAGCTAATAGACAAGTACGA-CTTATACGGTCAAGT 1846
Query 1792 TGCG-TACCCTAAACATCACAAACAGTCAGATGTTCCAGACATATATCGCCTTG-CTGC- 1848
|| | || ||| |||||| |||| || ||||| || || || || || ||| | ||
Sbjct 1847 GGCAATGCC-TAAGCATCACCAACAATCTGATGTGCCTGAAATTTACCGT-TTGGCAGCC 1904
Query 1849 AAAGTCAAAGGGTGT-TTTCATCAATCCAGC-TATCATTGAACCATTTGGACTTACAT-T 1905
||| ||||||| || ||| || |||||||| | |||| |||||||||||||| || | |
Sbjct 1905 AAAA-CAAAGGGAGTATTT-ATAAATCCAGCGT-TCATCGAACCATTTGGACTGAC-TCT 1960
Query 1906 AATTGAGGCTGCTGCTCATGGTTTACCTA-TGGTTGCTACAAAAAATGGTGGTCCTGTAG 1964
||| ||||| | |||||||| | || | || |||| |||| ||||| || ||||| |
Sbjct 1961 AATCGAGGCAGGAGCTCATGGGCTCCCCACTG-TTGCAACAATTAATGGAGGACCTGTCG 2019
Query 1965 ATATACACCGGGTCCTGGACAATGGTCTTCTTGTGGATCCTCATGATCAGCAATCTATTT 2024
||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||||
Sbjct 2020 ATATACATCGGGTTCTTGACAATGGTCTTCTAGTTGATCCTCATGATCAGCAAGCTATAG 2079
Query 2025 CTGAAGCTCTTCTTAAGCTTGTTGCTGATA-AGCACCTATGGGCAA-AGTGTCGG-CAAA 2081
|||| || || || || || ||| |||| | | || ||||||| || | || | | ||||
Sbjct 2080 CTGATGCGCTCCTGAAACTAGTTTCTGACAGA-CAGCTATGGGGAAGA-TG-CAGACAAA 2136
Query 2082 ACGGGTTGAAGAACATTCACCAATTTTCTTGGCCAGAGCACTGCAAAACTTATCTATCTC 2141
| || | || |||||||||| ||||| |||||||||||||||||||| ||| | |||
Sbjct 2137 ATGGCCTAAATAACATTCACCTGTTTTCATGGCCAGAGCACTGCAAAACATATTTGGCTC 2196
Query 2142 GCATAACCAGCTT-CAAACCAAGACATCCGCAGTGGCAAAGTGATGATGGCGGTGATAAT 2200
| ||| | | | ||| | ||||||||| | ||||| || | ||| | ||| ||
Sbjct 2197 GGATAGCTT-CGTGCAAGCAAAGACATCCTAAATGGCAGAGAGTTGA-GTT--TGAGAAC 2252
Query 2201 TCAGAAC-CCGAGTCACCTAGTGATTCT-TTGAGAGATATACAGGATATATCCTTGAA-C 2257
||||| | |||| ||||| || || ||| || ||||||||| | || || |||||||| |
Sbjct 2253 TCAGA-CTCCGATTCACCCAGCGACTCTCTT-AGAGATATAAATGACATCTCCTTGAATC 2310
Query 2258 TTAAAGTTTTCATTTGATGG 2277
| ||| ||| | || |||||
Sbjct 2311 TAAAACTTTCC-TTAGATGG 2329
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 176286637702
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5