BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg488942
Length=1104
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20330.1 | Symbols: BETAG4 | beta-1,3-glucanase 4 | chr5:687... 1572 0.0
AT5G20340.1 | Symbols: BG5 | beta-1,3-glucanase 5 | chr5:687478... 1182 0.0
AT1G33220.1 | Symbols: | Glycosyl hydrolase superfamily protei... 1062 0.0
> AT5G20330.1 | Symbols: BETAG4 | beta-1,3-glucanase 4 | chr5:6871561-6873112
FORWARD LENGTH=1552
Length=1552
Score = 1572 bits (851), Expect = 0.0
Identities = 1025/1109 (92%), Gaps = 12/1109 (1%)
Strand=Plus/Plus
Query 1 aaaaaaaCAAATTTGGTTCCTTTTTCTTCTTCAGACAAGTAAAATCTTTTTAGAT-TTCA 59
|||||||||||||||||||||||||||||||||||| ||||| ||| |||| | | ||||
Sbjct 1 AAAAAAACAAATTTGGTTCCTTTTTCTTCTTCAGACGAGTAATATC-TTTT-G-TCTTCA 57
Query 60 TCATGCTCTATTTACCTAAGAAGCTGTTCTTG---TTCCTCTCGTGCATTGTGATGTTGT 116
|||||||||||| ||||||||||||||||||| |||||||||||||||||| || | |
Sbjct 58 TCATGCTCTATTCACCTAAGAAGCTGTTCTTGTTCTTCCTCTCGTGCATTGTGCTG-TAT 116
Query 117 CAGTCAACTACAACAACAGTGCCTCCGTAACCGCAGCAAATAGCATCGGCTTGAACTACG 176
||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 117 --GTCAACTCCAACAACAGTGGCTTCGTAACCGCAGCAAATAGCATCGGCTTGAACTACG 174
Query 177 GCCTCCTCGGAGACAACCTCCCCTCTCCGTCCAATGTTATCAACCTTTACAAGTCCATAG 236
| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 175 GACTCCTCGGTGACAACCTCCCGTCTCCTTCCAATGTTATCAACCTTTACAAGTCCATAG 234
Query 237 GCATTACTAAAATCCGAATCTTCGACCCGAACACTGAGGTTCTCAATGCCTTACGTGGTC 296
|||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 235 GCATTAGTAGAATCCGAATCTTCGACCCGAACACTGAGGTACTCAATGCCTTACGTGGTC 294
Query 297 ACCGCGATATAGAAGTCACTGTTGGCGTTAAAGACCAAGACTTGGCTGCTCTTGCAGCAA 356
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 295 ACCGCGATATTGAAGTCACTGTTGGCGTTAAGGACCAAGACTTGGCTGCTCTTGCTGCAA 354
Query 357 GCGAAGAGGCTGTTAAGGGCTGGTTTGCGGCCAACATCGAGTCTTACTTAGCTGACGTCA 416
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 355 GCGAAGAAGCTGTTAAGGGCTGGTTCGCGGCCAACATCGAGTCTTACTTAGCTGACGTCA 414
Query 417 ACATCGCATTTATTACCATTGGTAACGAAGTCATCCCAGGACCAATCGGTCCTCAAGTGC 476
||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 415 ACATCACATTTATTACCGTTGGTAACGAAGTCATCCCCGGACCAATCGGTCCTCAAGTGC 474
Query 477 TTCCGGTCATGCAGTCTCTCACCAACCTCGTCAAGTCGAGAAATCTTCCTATCTTGATAA 536
|||| |||||||||||||| |||||||| ||||||||||| |||||||| |||| |||||
Sbjct 475 TTCCCGTCATGCAGTCTCTAACCAACCTAGTCAAGTCGAGGAATCTTCCGATCTCGATAA 534
Query 537 GCACCGTGGTAGCTATGTCGAACCTCGAGCAGTCGTACCCACCTTCCGCGGGAATGTTCA 596
|||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 535 GCACCGTGGTGGCTATGTCGAACCTGGAGCAGTCGTATCCACCTTCCGCGGGAATGTTCA 594
Query 597 CCTCCCAGGCTCGGGAACAACTTGTCCCCGTACTGAAACTATTGTCACAAACAAGTACAC 656
|||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct 595 CCTCCCAGGCGCGGGAACAACTTGTCCCCGTGTTGAAACTATTGTCTCAAACAAGCACAC 654
Query 657 CGATCCTTGTCAACATATACCCTTACTTCCCTTATGCGTCCGACCCAGTTAACATCCCTC 716
| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct 655 CAATCCTTGTCAACATATACCCTTACTTCGCTTATGCGTCCGACCCAGCCAACATCCGTC 714
Query 717 TCAACTATGCCACCTTCAACACTGAGGCCATATTGGTCCAAGATGGACCATTGGGTTATT 776
|| ||||||||| ||| |||||| || |||| |||||||||||||| ||||||| ||||
Sbjct 715 TCGACTATGCCAGCTTTAACACTAAGTCCATCGTGGTCCAAGATGGATCATTGGGCTATT 774
Query 777 CAAACATGTTTGAAGCAATCTTTGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGTTA 836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 CAAACATGTTTGATGCAATCTTTGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGTTA 834
Query 837 AAGATTTACCAATGGTGGTGTCCGAGACAGGATGGCCATCCGCGGGGAATGGGAACTTTA 896
|| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 835 AAAATTTACCAATGGTGGTGTCCGAGACCGGATGGCCATCCGCGGGGAACGGGAACTTTA 894
Query 897 CCACGCCGGATATCGCGTCTACCTACAACAGAAATTTTGTGAGGCATATAGCAAGCGGAA 956
||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 895 CCACGCCGGCTATTGCGTCCACCTACAACAGAAATTTTGTGAAGCATATAGCAAGCGGAA 954
Query 957 AAGGAACGCCTAAAAGGCCTAACAAGGGCATCGAT-GGGTTTCTGTTCGCAACGTTCAAT 1015
|||| ||||||||||||||||||||| |||| || |||||| |||| ||||||||||||
Sbjct 955 AAGGGACGCCTAAAAGGCCTAACAAGAGCAT-GAACGGGTTTTTGTTTGCAACGTTCAAT 1013
Query 1016 GAAAATCAAAAGCCGGTCGGGACTGAACAAAATTTTGGGTTGTACAATCCAAGTGATATG 1075
|||||||| ||||||| ||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 1014 GAAAATCAGAAGCCGGCCGGGACTGAACAAAACTTTGGTTTATACAATCCAAGTGATATG 1073
Query 1076 AAGCCAATCTACAAGCTATTTTAAGCGTG 1104
||||| |||||||||||||| |||| |||
Sbjct 1074 AAGCCTATCTACAAGCTATTCTAAGTGTG 1102
> AT5G20340.1 | Symbols: BG5 | beta-1,3-glucanase 5 | chr5:6874787-6875851
FORWARD LENGTH=1065
Length=1065
Score = 1182 bits (640), Expect = 0.0
Identities = 856/962 (89%), Gaps = 8/962 (1%)
Strand=Plus/Plus
Query 142 CGTAACCGCAGCAAATAGCATCGGCTTGAACTACGGCCTCCTCGGAGACAACCTCCCCTC 201
||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct 108 CGTAAACGCAGCAAATAGCATTGGCTTGAACTACGGTCTCCTCGGAGATAACCTCCCATC 167
Query 202 TCCGTCCAATGTTATCAA-CCTTTACAAGTCCATAGGCATTACTAAAATCCGAATCTTCG 260
|||||| || ||||| || ||||||||||||||||| ||| |||||||||||||||||||
Sbjct 168 TCCGTCAAAAGTTAT-AACCCTTTACAAGTCCATAGACATCACTAAAATCCGAATCTTCG 226
Query 261 ACCCGAACACTGAGGTTCTCAATGCCTTACGTGGTCACCGCGATATAGAAGTCACTGTTG 320
|||| |||||||||||||| || || |||||||| || || ||||| | ||||| || |
Sbjct 227 ACCCAAACACTGAGGTTCTTAACGCTTTACGTGGCCATCGTGATATTGCGGTCACAGTAG 286
Query 321 GCGTTAAAGACCAAGACTTGGCTGCTCTTGCAGCAAGCGAAGAGGCTGTTAAGGGCTGGT 380
| |||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct 287 GAGTTAGGGACCAGGACTTGGCTGCTCTTTCAGCTAGCGAAGAAGCTGTTAAGGGCTGGT 346
Query 381 TTGCGGCCAACATCGAGTCTTACTTAGCTGACGTCAACATCGCATTTATTACCATTGGTA 440
||||| ||||||||||| |||||||| | ||| |||||||||| || ||||| ||||||
Sbjct 347 TTGCGACCAACATCGAGCCTTACTTATCCGACATCAACATCGCGTTCATTACTGTTGGTA 406
Query 441 ACGAAGTCATCCCAGGACCAATCGGTCCTCAAGTGCTTCCGGTCATGCAGTCTCTCACCA 500
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 407 ACGAAGTCATCCCCGGACCAATCGGTCCTCAAGTGCTTCCAGTCATGCAGTCTCTCACCA 466
Query 501 ACCTCGTCAAGTCGAGAAATCTTCCTATCTTGATAAGCACCGTGGTAGCTATGTCGAACC 560
||||||||||||| || ||||||||||||| ||||||||| ||||| ||||||| |||||
Sbjct 467 ACCTCGTCAAGTCAAGGAATCTTCCTATCTCGATAAGCACGGTGGTGGCTATGTGGAACC 526
Query 561 TCGAGCAGTCGTACCCACCTTCCGCGGGAATGTTCACCTCCCAGGCTCGGGAACAACTTG 620
||||||| || |||||||||||||| ||||||||||| || || || || ||||||||||
Sbjct 527 TCGAGCAATCATACCCACCTTCCGCAGGAATGTTCACGTCTCAAGCGCGTGAACAACTTG 586
Query 621 TCCCCGTACTGAAACTATTGTCACAAACAAGTACACCGATCCTTGTCAACATATACCCTT 680
||||||| ||||||||||| || ||||||| | | || ||||| || || || |||||||
Sbjct 587 TCCCCGTGCTGAAACTATTATCCCAAACAAATTCGCCTATCCTCGTAAAAATCTACCCTT 646
Query 681 ACTTC-CCTTATGCGTCCGACCCAGT-TAACATCCCTCTCAACTATGCCACCTTCAACAC 738
||||| || ||||||||||||||| | || ||||| | | |||||||||||||||||||
Sbjct 647 ACTTCTCC-TATGCGTCCGACCCA-TCTAGCATCCGTTTGGACTATGCCACCTTCAACAC 704
Query 739 TGAGGCCATATTGGTCCAAGATGGACCATTGGGTTATTCAAACATGTTTGAAGCAATCTT 798
||||||||| |||| ||||||||| || |||| ||||||||||||||||| ||||||||
Sbjct 705 TGAGGCCATCGTGGTACAAGATGGATCACTGGGCTATTCAAACATGTTTGATGCAATCTT 764
Query 799 TGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGTTAAAGATTTACCAATGGTGGTGTC 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 TGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGTTAAAGATTTACCAATGGTGGTGTC 824
Query 859 CGAGACAGGATGGCCATCCGCGGGGAATGGGAACTTTACCACGCCGGATATCGCGTCTAC 918
|||||| ||||||||||| || |||||||| ||| |||||||||||||||||||| |||
Sbjct 825 CGAGACCGGATGGCCATCTGCCGGGAATGGAAACATTACCACGCCGGATATCGCGGGTAC 884
Query 919 CTACAACAGAAATTTTGTGAGGCATATAGCAAGCGGAAAAGGAACGCCTAAAAGGCCTAA 978
||| ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||
Sbjct 885 CTATAACAGAAATTTCGTGAAGCATATAGCAAGCGGAAAAGGTACACCTAAAAGGCCTAA 944
Query 979 CAAGGGCATCGATGGGTTTCTGTTCGCAACGTTCAATGAAAATCAAAAGCCGGTCGGGAC 1038
||| |||||||| |||||| |||| ||||| |||||||||||||||||||||||||||||
Sbjct 945 CAAAGGCATCGACGGGTTTTTGTTTGCAACTTTCAATGAAAATCAAAAGCCGGTCGGGAC 1004
Query 1039 TGAACAAAATTTTGGGTTGTACAATCC-AAGTGATATGAAGCCAATCTACAAGCTATTTT 1097
||||||||| |||||||| |||||||| || |||||||||||| |||||||| ||||| |
Sbjct 1005 TGAACAAAACTTTGGGTTATACAATCCGAA-TGATATGAAGCCCATCTACAATCTATTCT 1063
Query 1098 AA 1099
||
Sbjct 1064 AA 1065
> AT1G33220.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr1:12044872-12045879 FORWARD LENGTH=1008
Length=1008
Score = 1062 bits (575), Expect = 0.0
Identities = 854/989 (86%), Gaps = 18/989 (2%)
Strand=Plus/Plus
Query 62 ATGCTCTATTTAC-CTAAGAAGCTGTTCTTG---TTCCTCTCGTGCATTGTGATGTTGTC 117
||| |||| || | ||||||||||||||||| ||||||||||||| | | ||| || |
Sbjct 1 ATGGTCTA-TTCCTCTAAGAAGCTGTTCTTGTTCTTCCTCTCGTGCA-T-T-ATGCTGAC 56
Query 118 AGTCAACTACAACAAC-AGTGCCTCCGTAACCGCAGCAAATAGCATCGGCTTGAACTACG 176
||||||| ||| || |||| || |||| |||||||||||||||| |||||||||||||
Sbjct 57 TTTCAACTATAAC-ACTAGTGGCTTCGTAGCCGCAGCAAATAGCATAGGCTTGAACTACG 115
Query 177 GCCTCCTCGGAGACAACCTCCCCTCTCCGTCCAATGTTATCAACCTTTACAAGTCCATAG 236
||||||||||||| ||| |||| |||| ||||||||| |||||||||||||||||||||
Sbjct 116 GCCTCCTCGGAGATAACTTCCCAACTCCATCCAATGTTCTCAACCTTTACAAGTCCATAG 175
Query 237 GCATTACTAAAATCCGAATCTTCGACCCGAACACTGAGGTTCTCAATGCCTTACGTGGTC 296
||||||| |||||||||||||||||||| || || |||||||| || |||||||| || |
Sbjct 176 GCATTACAAAAATCCGAATCTTCGACCCAAAAACAGAGGTTCTTAACGCCTTACGCGGCC 235
Query 297 ACCGCGATATAGAAGTCACTGTTGGCGTTAAAGACCAAGACTTGGCTGCTCTTGCAGC-A 355
|||| |||| ||||||||||||||||| | ||||| ||||||| ||||||| |||| |
Sbjct 236 ACCGTAATATTGAAGTCACTGTTGGCGTGAGGGACCAGGACTTGGGTGCTCTTTCAGCTA 295
Query 356 AGCGAAGAGGCTGTTAAGGGCTGGTTTGCGGCCAACATCGAGTCTTACTTAGCTGACGTC 415
| |||||| |||||||||||||||||||| ||||||||||| |||||||||| || |||
Sbjct 296 A-CGAAGAAGCTGTTAAGGGCTGGTTTGCAACCAACATCGAGCCTTACTTAGCCGATGTC 354
Query 416 AACATCGCATTTATTACCATTGGTAACGAAGTCATCCCAGGACCAATCGGTCCTCAAGTG 475
||||| || || ||||| ||||||| ||||||||||| |||||||||||||||||||||
Sbjct 355 AACATTGCGTTCATTACTGTTGGTAATGAAGTCATCCCCGGACCAATCGGTCCTCAAGTG 414
Query 476 CTTCCGGTCATGCAGTCTCTCACCAACCTCGTCAAGTCGA-GAAATCTTCCTATCTTGAT 534
|||||||||||||||||||| |||| |||||||||||||| ||| ||||| |||| |||
Sbjct 415 CTTCCGGTCATGCAGTCTCTTACCATCCTCGTCAAGTCGATGAAC-CTTCCCATCTCGAT 473
Query 535 AAGCACCGTGGTAGCTATGTCGAACCTCGAGCAGTCGTACCCACCTTCCGCGGGA-ATGT 593
|||||||||||| ||||||||||| || ||||| || ||||||||||| || ||| | ||
Sbjct 474 AAGCACCGTGGTGGCTATGTCGAATCTTGAGCAATCATACCCACCTTCTGCTGGAGA-GT 532
Query 594 TCACCTCCCAGGCTCGGGAACAACTTGTCCCCGTACTGAAACTATTGTCACAAACAAGTA 653
|||| || || || || ||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 533 TCACGTCTCAAGCGCGAGAACAACTTGTCCCCGTGCTGAAACTATTGTCTCAAACAAGTA 592
Query 654 CACCGATCCTTGTCAACATATACCCTTACTTCCCTTATGCGTCCGACCCAGTTAACATCC 713
| || || || ||||| || ||||||||||| ||||| || ||||||||| |||||||
Sbjct 593 CGCCTATTCTCGTCAATATTTACCCTTACTTTCCTTACGCATCCGACCCAACGAACATCC 652
Query 714 CTCTCA-ACTATGCCACCTTCAACACTGAGGCCATATTGGTCCAAGATGGACCATTGGGT 772
|||| | ||||||| |||||||||||| |||||| | ||||||||||||||||||||
Sbjct 653 CTCT-AGACTATGCTACCTTCAACACTAAGGCCACCGTCGTCCAAGATGGACCATTGGGC 711
Query 773 TATTCAAACATGTTTGAAGCAATCTTTGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGC 832
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct 712 TATTCAAACATGTTTGATGCAATCTTTGACGCATTCGTGTGGGCAATGGAGAAGGAAGGC 771
Query 833 GTTAAAGATTTACCAATGGTGGTGTCCGAGACAGGATGGCCATCCGCGGGGAATGGGAAC 892
|| ||||||||||| ||||||||||||||||| ||||||||||| || || |||||||||
Sbjct 772 GTGAAAGATTTACCCATGGTGGTGTCCGAGACCGGATGGCCATCTGCCGGAAATGGGAAC 831
Query 893 TTTACCACGCCGGATATCGCGTCTACCTACAACAGAAATTTTGTGAGGCATATAGCAAGC 952
|| ||||| |||||||||||| ||| |||||||||||||| |||| ||||||| ||||
Sbjct 832 TTAACCACACCGGATATCGCGGGTACTTACAACAGAAATTTCGTGAAACATATAGTAAGC 891
Query 953 GGAAAAGGAACGCCTAAAAGGCCTAACAAGGGCATCGATGGGTTTCTGTTCGCAACGTTC 1012
|| || ||||||||||| | || ||||| || || ||||||||| | || |||||||||
Sbjct 892 GGGAAGGGAACGCCTAAGCGACCCAACAATGGAATGGATGGGTTTTTATTTGCAACGTTC 951
Query 1013 AATGAAAATCAAAAGCCGGTCGGGACTGA 1041
|| |||||||||||||||| |||||||||
Sbjct 952 AACGAAAATCAAAAGCCGGCCGGGACTGA 980
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54116187510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5