BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488953 Length=3299 Score E Sequences producing significant alignments: (Bits) Value AT5G20480.1 | Symbols: EFR | EF-TU receptor | chr5:6922480-6925... 4940 0.0 AT5G39390.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1057 0.0 AT3G47110.1 | Symbols: | Leucine-rich repeat protein kinase fa... 399 6e-110 AT1G09995.1 | Symbols: | DNA repair DEAD helicase RAD3/XP-D su... 135 2e-30 > AT5G20480.1 | Symbols: EFR | EF-TU receptor | chr5:6922480-6925887 FORWARD LENGTH=3321 Length=3321 Score = 4940 bits (2675), Expect = 0.0 Identities = 3119/3330 (94%), Gaps = 44/3330 (1%) Strand=Plus/Plus Query 1 ATCTTTTTATAAGCGACATGAAGCTGT-CTTTTCCACTTGCTTTCAATGCTCTCATGTTG 59 |||||||||||| |||||||||||||| ||||| |||||| |||||||||||||| |||| Sbjct 1 ATCTTTTTATAATCGACATGAAGCTGTCCTTTT-CACTTGTTTTCAATGCTCTCACGTTG 59 Query 60 CTTCTTCAAGTTTGCTGCGTGGTCTTTGCTCAAGCCAGGTTTTCTAATGAGACTGACATG 119 |||||||||| || ||| |||||||||||||||||||||||||||||||||| ||| Sbjct 60 CTTCTTCAAG-TT--TGC---ATCTTTGCTCAAGCCAGGTTTTCTAATGAGACTGATATG 113 Query 120 AAAGTTTTGCTTGAGTTCAAGTCTCAAGTTTCTG--AA-AACAAGAGAGAGGTCTTGGCC 176 ||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 114 CAAGCTTTGCTTGAGTTCAAGTCTCAAGTTTCTGAAAACAACAAGAGAGAGGTCTTGGCT 173 Query 177 TCATGGAATCACTCCTCCCCATTATGCAATTGGATTGGAGTCATATGTGGCCGCAGGCA- 235 ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| | Sbjct 174 TCATGGAATCACTCCTCCCCATTTTGTAATTGGATTGGAGTCACATGTGGCCGCAGG-AG 232 Query 236 AGAAAGAGTTATAAGTCTGAACCTCGGAGGATTCAAGTTAACCGGTGTGATCTCACCCTC 295 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 233 AGAAAGAGTTATAAGTTTGAACCTTGGAGGATTCAAGTTAACCGGTGTGATCTCACCCTC 292 Query 296 CATTGGTAATCTCTCCTTTCTCAGGTTTCTTAATCTTGGAGACAACTCTTTTGGAAGTAC 355 ||||||||||||||||||||| || || |||||||||| ||||||||||||||||||||| Sbjct 293 CATTGGTAATCTCTCCTTTCTTAGATTACTTAATCTTGCAGACAACTCTTTTGGAAGTAC 352 Query 356 CATCCCTCAAGAGGTGGGAATGCTATTTAGGCTTCAGTACTTGAACATGAGCTATAATCT 415 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 353 CATCCCTCAAAAGGTGGGAAGGCTATTTAGGCTTCAGTACTTGAACATGAGCTATAATCT 412 Query 416 TCTCCAAGGAAGGATTCCGCCTAGTCTTTCTAATTGCTCTAGACTGTCGACTGTTGATTT 475 |||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct 413 TCTCGAAGGAAGGATTCCGTCTAGTCTTTCTAACTGCTCTAGACTGTCGACCGTTGATTT 472 Query 476 ATCGTCAAACCAGCTTGGACATGGCGTTCCTTCAGAACTAGGTTCACTTTCTAAGCTGGC 535 |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 473 ATCGTCAAACCATCTTGGACATGGTGTTCCTTCAGAACTAGGTTCACTTTCTAAGCTTGC 532 Query 536 CATTCTGGATCTTAGTAAAAACAACCTTACAGGAAATTTTCCTGCATCTTTTGGAAACTT 595 ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct 533 CATTCTGGATCTTAGCAAAAACAACCTTACTGGAAATTTTCCTGCATCTTTAGGAAACTT 592 Query 596 GACGTCACTCCAGAAGCTTGACTTTGCATATAACCAGATGGGAGGTGAGATTCCAGACGA 655 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 593 GACGTCACTTCAGAAGCTTGACTTTGCATATAACCAGATGAGAGGTGAGATTCCAGACGA 652 Query 656 AGTAGCTAGATTGACTCATATGGTGTTTTTTCAAATAGCACTGAATAGTTTTTCAGGTGG 715 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 653 AGTAGCTAGATTGACTCAAATGGTGTTTTTCCAAATAGCACTGAATAGTTTTTCAGGTGG 712 Query 716 TTTTCCTCCTGCATTGTACAACATCTCCTCTCTTGAGTTTCTATCTCTAGCTGACAATAG 775 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 713 TTTTCCTCCTGCATTGTACAACATCTCCTCTCTTGAGTCTCTATCTCTAGCTGACAATAG 772 Query 776 CTTTTCGGGTAACCTTAGGGCTGATTTTGGTGATCTTCTACCAAGTCTAAGATGGCTTCT 835 |||||||||||| |||||||||||||||||| |||||||||||| ||||||| | ||||| Sbjct 773 CTTTTCGGGTAATCTTAGGGCTGATTTTGGTTATCTTCTACCAAATCTAAGAAGACTTCT 832 Query 836 TTTGGGATCAAATCAGTTCACTGGAGCTATTCCCATAACACTTGCCAATATCTCAAGCCT 895 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 833 TTTGGGAACAAATCAGTTCACTGGAGCTATTCCCAAAACACTTGCCAATATCTCAAGCCT 892 Query 896 TGAATGGTTTGATATCTCATCTAATTACCTGACTGGAAGTATCCCTTTGAGCTTTGGAAA 955 |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 893 TGAAAGGTTTGATATCTCATCTAATTACCTGTCTGGTAGTATCCCTTTGAGCTTTGGAAA 952 Query 956 GTTACGTAATCTGTGGTGGTTAGGAATTCGTAATAACTCTCTTGGATATAACTCGTCCAG 1015 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 953 GTTACGTAATCTGTGGTGGTTAGGGATTCGTAATAACTCTCTTGGAAATAACTCGTCCAG 1012 Query 1016 TGGTCTTGAATTTATTGGTGCTTTGGCGAACTGCACTCAATTAGAGTACTTAGATGTTGG 1075 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 1013 TGGTCTTGAATTTATTGGGGCTGTGGCGAACTGCACTCAATTAGAGTACTTAGATGTTGG 1072 Query 1076 TTACAATAGACTTGGAGGTGAGCTGCCTGCCTCCATGGCCAATCTGTCCACTAAATTGAC 1135 |||||||||||||||||||||||| ||||| || || |||||||||||||||| |||||| Sbjct 1073 TTACAATAGACTTGGAGGTGAGCTTCCTGCTTCTATAGCCAATCTGTCCACTACATTGAC 1132 Query 1136 TAGTCTGTTCCTTGGACAAAATCTTATCTCTGGAACCATTCCTTACGACATCGGGAATCT 1195 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 1133 TAGTCTGTTCCTTGGACAAAATCTTATCTCTGGAACCATTCCTCATGACATCGGGAATCT 1192 Query 1196 TATAAGCCTGCAAGAACTCAGTTTGGAAACAAATAAGTTGTCTGGAGAACTTCCAGTCTC 1255 | ||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||| Sbjct 1193 TGTAAGCCTGCAAGAACTCAGCTTAGAAACAAATATGTTGAGTGGAGAACTTCCCGTCTC 1252 Query 1256 TTTCGGGAAGCTTTTGAATTTGCAGGTGGTGGATCTCTATTCAAATGCAATATCGGGGGA 1315 |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 1253 TTTCGGGAAGCTTTTGAACTTGCAGGTTGTGGATCTGTATTCAAATGCAATATCGGGGGA 1312 Query 1316 AATACCATCTTATTTTGGCAACATGACTCGGTTGCAGAAGCTCCATTTGAATAGCAATAG 1375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 AATACCATCTTATTTTGGCAACATGACTCGGTTGCAGAAGCTCCATTTGAATAGCAATAG 1372 Query 1376 TTTCCACGGAAGAATCCCTCAGAGTCTTGGACGTTGTCAATACTTGCTAGACCTGTGGAT 1435 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1373 TTTCCACGGAAGAATCCCTCAGAGTCTTGGACGTTGTCGATACTTGCTAGACCTGTGGAT 1432 Query 1436 TGATACAAATAGGTTGAATGGGACTATACCTCGGGAAATACTGCAAATTCCGTCCCTCGC 1495 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 1433 GGATACAAATAGGTTGAATGGGACTATACCTCAGGAAATACTGCAAATTCCATCCCTCGC 1492 Query 1496 TTACATAGATTTGTCAAACAATTTCTTGACCGGCCATTTTCCAGAAGAAGTTGGAAAGTT 1555 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1493 TTACATAGATTTGTCAAACAATTTCTTGACAGGCCATTTTCCAGAAGAAGTTGGAAAGTT 1552 Query 1556 GGAACTTCTTGTTGGACTAGGTGCTTCGTACAACAAATTATCAGGACAGATCCCACAAGC 1615 ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 1553 AGAACTTCTTGTTGGACTAGGTGCTTCGTACAACAAATTATCAGGAAAGATGCCACAAGC 1612 Query 1616 TATAGGGGGTTGTCTCTCGATGGAATTTCT-TTATATGCAAGGAAATTCGTTTGACGGAG 1674 ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| Sbjct 1613 TATAGGGGGTTGTCTTTCGATGGAATTTCTCTT-TATGCAAGGAAATTCGTTTGACGGAG 1671 Query 1675 CCATTCCAGATATAAGTCGGTTGGTAAGCCTAACGAATGTTGACTTCTCCAACAACAATC 1734 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct 1672 CCATTCCAGATATAAGCCGGTTGGTAAGCCTAAAGAATGTTGACTTCTCCAACAACAATC 1731 Query 1735 TCTCTGGCCGGATACCTCGATATCTGGCCAATCTACCTTTGTTGCGAAATCTGAATCTTT 1794 |||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||| Sbjct 1732 TCTCTGGCCGGATACCTCGATATCTGGCCAGTCTTCCTTCGCTGCGAAATCTGAATCTTT 1791 Query 1795 CTATGAACAATTTTGAGGGAAGCGTGCCAACAACAGGAGTGTTCCGAAATGCTACAGCAG 1854 |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 1792 CTATGAACAAGTTTGAGGGAAGGGTGCCAACAACAGGAGTGTTTCGAAATGCTACAGCAG 1851 Query 1855 TTTCTGTTTTTGGTAACAAAAATATATGCGGAGGCATCAGAGAAATGCAACTAAAGCCAT 1914 |||||||||||||||||| |||||| ||||||||| || ||||||||||||||||||||| Sbjct 1852 TTTCTGTTTTTGGTAACACAAATATTTGCGGAGGCGTCCGAGAAATGCAACTAAAGCCAT 1911 Query 1915 GCATTGTAGAAGCATCTCCAAGGAAGAGAAAGCCTTTCTCACTTAGAAAGAAAGTTTTCA 1974 |||||||| | |||||||||||||||||||||||| | ||| |||||||||||||| ||| Sbjct 1912 GCATTGTACAGGCATCTCCAAGGAAGAGAAAGCCTCTGTCAGTTAGAAAGAAAGTTGTCA 1971 Query 1975 GTGGTATTGGTATAGGTATAGCTTCGCTTTTGTTAATCATAATTGTGGCTTCTCTGTGTT 2034 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1972 GTGGTATTTGTATAGGTATAGCTTCGCTTTTGTTAATCATAATTGTGGCTTCTCTGTGTT 2031 Query 2035 GGTTCATGAAGAGGAGAAAGAAGAACAATGCCAGTGATGGTAACCCATCTGATTCTACTA 2094 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2032 GGTTCATGAAGAGGAAAAAGAAAAACAATGCCAGTGATGGTAACCCATCTGATTCTACTA 2091 Query 2095 CTTTGGGGATGTTCCATGAGAAGGTAAGTTATGATGAGCTTCATAGTGCAACAAGTGGCT 2154 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 2092 CTTTGGGGATGTTCCATGAGAAGGTAAGTTATGAAGAGCTTCATAGTGCAACAAGTCGCT 2151 Query 2155 TCTCTTCAACCAATCTGATTGGGTCAGGCAATTTCGGTAATGTGTTTAAAGGATTGCTTG 2214 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2152 TCTCTTCAACCAATTTGATTGGTTCAGGCAATTTCGGTAATGTGTTTAAAGGATTGCTTG 2211 Query 2215 GCCATGAGAATAGACTCGTTGCGGTTAAAGTTCTGAACCTCCTAAAGCATGGAGCAACTA 2274 ||| |||||||| |||||| |||||||||||| |||||||||||||||||||||| || | Sbjct 2212 GCCCTGAGAATAAACTCGTCGCGGTTAAAGTTTTGAACCTCCTAAAGCATGGAGCGACGA 2271 Query 2275 AAAGCTTTATGTCGGAATGTGAAACCTTCAAGGGTATACGACATCGTAACCTTGTAAAAC 2334 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2272 AAAGCTTTATGGCGGAATGTGAAACCTTCAAGGGTATACGACATCGTAACCTTGTAAAAC 2331 Query 2335 TGATAACGGTCTGTTCAAGTCTCGATTCCGAGGGAAATGAGTTCAGAGCTCTGGTCTATG 2394 |||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct 2332 TGATAACGGTTTGTTCAAGCCTTGATTCCGAGGGAAATGATTTCAGAGCTCTGGTCTATG 2391 Query 2395 AGTTCATGCCAAAAGGAAGTCTGGATATGTGGCTGCAGCCAGAAGATCAGGAAAGGGCAA 2454 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 2392 AGTTCATGCCAAAAGGAAGTCTGGATATGTGGCTGCAGCTAGAAGATCTGGAAAGGGTAA 2451 Query 2455 ACGAGCACTCGAGATCCTTAACACTTGCAGAGAAACTCAACATAGCAATAGATGTGGCTT 2514 |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 2452 ACGATCACTCGAGATCTTTAACACCCGCAGAGAAACTCAACATAGCAATAGATGTGGCTT 2511 Query 2515 CAGCTTTGGAGTATCTGCACGTTCATTGTCATGACCCTGTAGCTCACTGTGATATTAAGC 2574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2512 CAGCTTTGGAGTATCTGCACGTTCATTGTCATGACCCTGTAGCTCACTGTGATATTAAGC 2571 Query 2575 CAAGCAACGTTCTTCTAGACGATGATCTGACTGCTCATGTTAGTGACTTTGGTTTGGCTC 2634 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2572 CAAGCAACATTCTTCTAGACGATGATCTGACTGCTCATGTTAGTGACTTTGGTTTGGCTC 2631 Query 2635 GGCTCCTCTATAAATACGATCGAGAATCCTTTCTAAACCAGTTTAGTTCTGCCGGTGTCA 2694 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2632 AGCTCCTCTATAAATACGATCGAGAATCCTTTCTAAACCAGTTTAGTTCTGCTGGTGTCA 2691 Query 2695 GAGGCACCATTGGCTATACCGCACCAGAATATGGAATGGGAGGCCAACCATCAATACAAG 2754 ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| Sbjct 2692 GAGGCACCATTGGCTATGCCGCGCCAGAGTATGGAATGGGAGGCCAACCATCAATACAAG 2751 Query 2755 GAGATGTGTACAGCTTTGGAATTCTACTTTTGGAGATGTTCACAGGAAAGAAACCGACAG 2814 |||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||| Sbjct 2752 GAGATGTGTACAGCTTCGGAATTCTACTTTTGGAGATGTTTAGTGGAAAGAAACCAACAG 2811 Query 2815 GCGAACCATTTGCAGGCGATTACAACCTCCACTGCTACACACAGTCGGTATTGTCTGGTT 2874 ||| |||||||||||||||| ||||||||| |||||||| |||| |||| || |||| Sbjct 2812 ATGAATCATTTGCAGGCGATTATAACCTCCACAGCTACACAAAGTCTATATTATCGGGTT 2871 Query 2875 GCACGAGTAGTGGAGGCAGCAACGCCATTGATGAATGGTTGAGACTGGTTTTGCAGGTGG 2934 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2872 GCACGAGCAGTGGAGGCAGCAACGCCATTGATGAGGGGTTGAGACTGGTTTTGCAGGTGG 2931 Query 2935 GGATAAAGTGTTCTGAAGAATATCCAAGGGATAGGATGAGAATTGCTGAAGTGGTACGAG 2994 ||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||| Sbjct 2932 GGATAAAGTGTTCTGAAGAATATCCGAGGGATAGGATGAGAACGGATGAAGCAGTACGAG 2991 Query 2995 AATTAATCTCAATCAGAACTAAATTCTTCAGTGCCAAGACGACTATTACAGAGAGTCCTC 3054 ||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||| Sbjct 2992 AATTAATCTCAATAAGATCTAAGTTCTTCAGTTCCAAGACGACTATTACAGAGAGTCCTC 3051 Query 3055 GAGATGCTCCGCAAAGTTCTCCTCAGGAATGGATGTTAGATGCGGACTTGCATACTGTGT 3114 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| Sbjct 3052 GAGATGCTCCGCAAAGTTCTCCTCAGGAATGGATGTTAAATACGGACATGCATACTATGT 3111 Query 3115 AGACCCTTCTCAACTACTTAGGATGGGCACACAGTAAAAG---AT---CG-----A--A- 3160 |||||||||||||||||||| | ||| |||||||||||| || || | | Sbjct 3112 AGACCCTTCTCAACTACTTATG--GGG-ACACAGTAAAAGTGTATTTGCGTGTGCATCAT 3168 Query 3161 --A--CAGAACAT-TGTTGGG-G-AG-AGA--CTACTAATTATATATAA-AGAACATTTT 3209 | ||||||| ||||||| | || ||| |||||| ||||| |||| |||| | || Sbjct 3169 CGAAACAGAACAAATGTTGGGAGGAGGAGAGACTACTAGTTATA-ATAAGAGAATAAATT 3227 Query 3210 AAAATCTATCTCTGCTGTAGCCTTTCTTTTGTTGTTGTGGGTGATAATGATTATGACCAC 3269 ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||| Sbjct 3228 AAAATCTATCTCTGCTGTAGCCTTTTTTTTTTTGTTGTGGGTGAAAATGATTATGATCAC 3287 Query 3270 ATAGATATGGTCGTTGAATATCCTTTTTCA 3299 ||| |||||||||||||||||||||||||| Sbjct 3288 ATATATATGGTCGTTGAATATCCTTTTTCA 3317 > AT5G39390.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr5:15763715-15765469 REVERSE LENGTH=1509 Length=1509 Score = 1057 bits (572), Expect = 0.0 Identities = 809/921 (88%), Gaps = 26/921 (3%) Strand=Plus/Plus Query 2115 AAGGTAAGTTATGATGAGCTTCATAGTGCAACAAGTGGCTTCTCTTCAACCAATCTGATT 2174 ||| |||||||||| |||||| ||| ||||||||||||||||||||||| |||||| ||| Sbjct 586 AAGATAAGTTATGAAGAGCTTTATAATGCAACAAGTGGCTTCTCTTCAAGCAATCTAATT 645 Query 2175 GGGTCAGGCAATTTCGGTAATGTGTTTAAAGGATTGCTTGGCCAT-GA-GAATAGACTCG 2232 || |||||||| ||| || |||||||||||||||||||||||| | || ||| | ||||| Sbjct 646 GGTTCAGGCAACTTCAGTGATGTGTTTAAAGGATTGCTTGGCC-TCGAGGAA-AAACTCG 703 Query 2233 TTGCGGTTAAAGTTCTGAACCTCCT-AAAGCATGGAGCAACTAAAAGCTTTAT-GTCGGA 2290 | |||||||||||| |||||||||| ||| ||||||||||| ||||||||||| | |||| Sbjct 704 TCGCGGTTAAAGTTTTGAACCTCCTGAAA-CATGGAGCAACAAAAAGCTTTATAG-CGGA 761 Query 2291 ATGTGAAACCTTCAAGGGTA-TACGACATCGTAACCTTGTAAAACTGATAACGGTCTGTT 2349 ||||||| | ||||| |||| || | || |||||||||| ||||||||||| || || | Sbjct 762 ATGTGAATCTTTCAAAGGTATTA-GGCACCGTAACCTTGCGAAACTGATAACAGTTTGCT 820 Query 2350 CAAGTCTCGATTCCGAGGGAAATGAGTTCAGAGCTCTGGTCTATGAGTTCATGCCAAAAG 2409 |||| || |||||| | |||||||| ||||||||| | |||||||||||||||||||||| Sbjct 821 CAAGCCTTGATTCCCAAGGAAATGATTTCAGAGCTTTAGTCTATGAGTTCATGCCAAAAG 880 Query 2410 GAAGTCTGGATATGTGGCTGCAGCCAGAAGATCAGGAAAGGGCAAACGAGCACTCGAGAT 2469 ||||||| ||||||||||| |||||||||||| |||||| |||||| | ||||| || | Sbjct 881 GAAGTCTAGATATGTGGCTACAGCCAGAAGATTTGGAAAGTGCAAACAATCACTCAAGGT 940 Query 2470 CCTTAACACTTGCAGAGAAACTCAACATAGCAATAGATGTGGCTTCAGCTTTGGAGTATC 2529 | |||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 941 CTTTAACATTTGCAGAGAAAGTCAACATAGCAATAGATGTGGCTTCTGCTTTGGAGTATC 1000 Query 2530 TGCACGTTCATTGTCATGACCCTGTAGCTCACTGTGATATTAAGCCAAGCAACGTTCTTC 2589 |||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1001 TGCATGTTTATTGTCATGACCCTGTCGCTCATTGTGATATTAAGCCAAGCAACGTTCTTC 1060 Query 2590 TAGACGATGATCTGACTGCTCATGTTAGTGACTTTGGTTTGGCTCGGCTCCTCTATAAAT 2649 ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1061 TAGACGATGATTTGACGGCTCATGTTAGTGACTTTGGTTTGGCTCGGCTCCTTTATAATT 1120 Query 2650 ACGATCGAGAAT-CCTTTCTAAACCAGTTTAGTTCTGCCGGTGTCAGAGGCACCATTGGC 2708 |||| ||||| |||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct 1121 TCGAT-GAGAAAACCTTTCTAAACCAGTTCAGTTCTGCCGGTGTGAGAGGTACCATTGGC 1179 Query 2709 TATACCGCACCAGAATATGGAATGGGAGGCCAACCATCAATACAAGGAGATGTGTACAGC 2768 ||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 1180 TATGCCGCACCAGAATATGGAATGGGAAGCAAACCATCAATACAAGGAGATGTTTACAGC 1239 Query 2769 TTTGGAATTCTACTTTTGGAGATGTTCACAGG-AAAGAAACCGACAGGCGAAC-CATTTG 2826 |||||| || ||||||||||||||||||| || ||| |||||||||| | || |||||| Sbjct 1240 TTTGGAGTTTTACTTTTGGAGATGTTCACTGGGAAA-AAACCGACAGAC-AATTCATTTG 1297 Query 2827 CAGGCGATTACAACCTCCACTGCTACACACAGTCGGTATTGTC-TGGTTGCACGAGTAGT 2885 |||| ||| ||||||||| |||||||| ||||||||||||| || || |||||| || Sbjct 1298 GTGGCGGTTATAACCTCCACGGCTACACAAAGTCGGTATTGTCGTG-TTCCACGAGCAGA 1356 Query 2886 GGAGGCAGCAACGCCAT--T-GATGAATGGTTGAGACTGGTTTTGCAGGTGGGGATAAAG 2942 |||||||| ||| | || | ||||| ||||||||||| |||||| | ||||| |||||| Sbjct 1357 GGAGGCAG-AAC-C-ATGGTTGATGAGTGGTTGAGACTAGTTTTGGAAGTGGGAATAAAG 1413 Query 2943 TGTTCTGAAGAATATCCAAGGGATAGGATGAGAATTGCTGAAGTGGTACGAGAATTAATC 3002 |||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||| || Sbjct 1414 TGTTCTGAAGAATATCCACGGGATAGGATGGGAATGGCTGAAGCGGTACGAGAATTAGTC 1473 Query 3003 TCAATCAGAA-CTAAATTCTT 3022 ||||||| || |||| ||||| Sbjct 1474 TCAATCA-AATCTAAGTTCTT 1493 > AT3G47110.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17347103-17350296 REVERSE LENGTH=3078 Length=3078 Score = 399 bits (216), Expect = 6e-110 Identities = 1331/1848 (72%), Gaps = 162/1848 (9%) Strand=Plus/Plus Query 126 TTGCTTGAGTTCAAGTCTCAAGTTTCTGAAAACAAG-AGAGAGGTCTTGGCCTCATGGAA 184 ||||||||||||||||||||||||||||||| |||| |||| || |||| ||| ||||| Sbjct 130 TTGCTTGAGTTCAAGTCTCAAGTTTCTGAAA-CAAGTAGAGTTGTGTTGGGCTCGTGGAA 188 Query 185 TCACTCC-TCCC-CATTATGCAATTGGATTGGAGTCATA-TGTGGCCGCAGGCA-AGAAA 240 | ||||| | || | | || | |||| || || | | ||||||| || || || | Sbjct 189 TGACTCCCTGCCTC-TC-TGTAGCTGGACCGGTGTTA-AGTGTGGCCTCAAACACAGGA- 244 Query 241 GAGTTA-TAAGTCTGAACCTCGGAGGATTCAAGTTAACCGGTGT-GATCTCACCCTCCAT 298 |||| | | || || | || |||||| | || |||||||||| | |||| |||| | Sbjct 245 GAGTAACTG-GTGTGGATCTTGGAGGACTAAAACTAACCGGTGTAG-TCTCTCCCTTTGT 302 Query 299 TGGTAATCTCTCCTTTCTCAGGTTTCTT-AATCTTGGAGACAACTCTTTTGGAAG-TACC 356 |||||| ||||| ||||| || | | || ||||||| |||||||| |||| | | | || Sbjct 303 TGGTAACCTCTCATTTCTTAGATCT-TTGAATCTTGCAGACAACT-TTTTCCATGGTGCC 360 Query 357 ATCCCT-CAAGAGGTGGGAATGCTAT-TT-AGGCTTCAGTACTTGAACATGAGCTATAAT 413 |||||| || ||||| |||| || | || |||||||| || |||||||||||| ||||| Sbjct 361 ATCCCTTCA-GAGGTTGGAAA-CT-TGTTCAGGCTTCAATATTTGAACATGAGCAATAAT 417 Query 414 CT-TCTCCAAGGAAGGATTCCGCCTAGT-CTTTCTAATTGCTCTAGACTGTCGACTGTTG 471 | | | | || | |||||| | || || || || |||||||| ||||| || ||| Sbjct 418 TTATTTGGAGGGGTG-ATTCCGGTT-GTTCTGTCGAACTGCTCTAGCCTGTCAACACTTG 475 Query 472 ATTTATCGTCAAACCAGCTTGGACATGGCGTTCCTTCAGAACTAGGTTCACTTTCTAAGC 531 ||||||| ||||| || |||| ||| ||||| |||| || | ||||| || ||||||| Sbjct 476 ATTTATCATCAAATCATCTTGAACAAGGCGTGCCTTTGGAGTTTGGTTCGCTGTCTAAGC 535 Query 532 TGG-CCATTCTGGATCTTAGTAAAAACAACCTTACAGGAAATTTTCCTGCATCTTTTGGA 590 | | || |||| |||| ||| |||||| || ||||| || |||||||| || || ||| Sbjct 536 TTGTCC-TTCTCTCTCTTGGTAGAAACAATCTAACAGGGAAGTTTCCTGCCTCATTGGGA 594 Query 591 AACTTGACGTCACTCCAGAAGCTTGACTTTGCATATAACCAGATGGGAGGTGAGATTCCA 650 ||| |||| |||||||||| ||| || ||| ||||||||| || | ||| ||||| || Sbjct 595 AACCTGACATCACTCCAGATGCTCGATTTTATATATAACCAAATAGAAGGAGAGATCCCT 654 Query 651 GACGA-AGTAGCTAGATTGACTCATATGGTGTTTTTTCAAATAGCACTGAATA-GTTTT- 707 | || | |||| ||| ||| || ||| | ||||| | ||||||| | || | |||| Sbjct 655 GGGGATA-TAGCCAGACTGAAACAGATGATCTTTTTCCGAATAGCATTAAACAAGTTTAA 713 Query 708 TCAGGTGGTTTTCC-TCCTGCA-TTGTACAACATCTCCTCTCTTGAGT-TTC-TATCTC- 762 | || |||||||| |||| || || |||||| | || || || | | ||| | || | Sbjct 714 T--GG-GGTTTTCCCTCCTCCAATT-TACAACCTGTCTTCACTA-A-TATTCCTGTC-CA 766 Query 763 T-AGCTGACAATAGCTTT-TCGGGTAACCTTAGGGCTGATTTTGGTGATCTTCTACC-AA 819 | | | | ||| || ||| || || | |||||| |||| |||||| |||||| || || Sbjct 767 TTACCGG-CAACAG-TTTCTCTGGCACCCTTAGACCTGACTTTGGTTCTCTTCTCCCTAA 824 Query 820 G-T-CTAAGATGGCT-TCTTTTGGGATCAAATCAGTT-CACTGG-AGCTATTCCCATA-A 873 | | || || || | | | ||||| |||| |||| ||| || | | ||||| | | | Sbjct 825 CCTTC-AA-ATA-CTATATATGGGGAT-AAAT-AGTTTCACGGGTACC-ATTCC-AGAGA 877 Query 874 CACTTGCCAATATCTCAAGCCTT-GA-ATGGTTTGATATCTCA-TCTAATTACCTGACTG 930 ||||| ||||||||||||| ||| || | || ||||| || ||||| | || |||| Sbjct 878 CACTTTCCAATATCTCAAGTCTTCGACAAC-TT-GATAT-TCCGTCTAACCATCTTACTG 934 Query 931 GAA-GTATCCCTTTGAGCTTT-GGAA-AGTT-ACGTAATCTGTGG-TGGTTAGGAATTCG 985 ||| | || || ||||| ||| |||| | || | | ||||| | || | ||| || Sbjct 935 GAAAG-ATACCATTGAG-TTTCGGAAGACTTCA-G-AATCTATTACTGCT-AGGCCTTAA 989 Query 986 TAATAACTCTCTTGGATA-TAACTCGTCCAGTGGTCTTGAATTTATTGGTGCTTTGGCGA 1044 |||||||||||| ||| | || ||| || ||| |||||| ||| ||||||| || | | Sbjct 990 TAATAACTCTCTGGGAAACTA-CTCTTCTGGTGATCTTGATTTTCTTGGTGCACTGACTA 1048 Query 1045 ACTGCACTCAATTAG-AGTACTTAGA-TGTTGG-TTACAATAGACTTGGAGGTGAGCTGC 1101 |||||| ||| || | |||| || || |||||| || ||| | ||| || ||| || ||| Sbjct 1049 ACTGCAGTCAGTT-GCAGTATTT-GAATGTTGGCTT-CAACAAACTCGGCGGTCAGTTGC 1105 Query 1102 CTGCCTCCATGGCCAATCTGTCCACTAAATTGACT-AG-TCTGTTCCTTGGACAAAATCT 1159 ||| || || |||||||| ||||| |||| ||| || ||| | | |||| |||||| Sbjct 1106 CTGTCTTTATAGCCAATCTCTCCACCCAATTAACTGAGCTCTCT-C-TTGGTGGAAATCT 1163 Query 1160 TATCTCTGGAACCATTCCTTACGACATCGGGAATCTTATAAGCCTGCAAGA-ACTCAGT- 1217 |||||||||| |||||| | | ||| ||||||||| ||||||||||| | | | || Sbjct 1164 CATCTCTGGAAGTATTCCTCATGGCATAGGGAATCTTGTAAGCCTGCAA-ACATT-AGAC 1221 Query 1218 TTGGAA-ACAAATAAGTTGTCTGG-AGAACTTCCAGTCTCTTTCGG-GAAGCTTT-TGAA 1273 |||| | |||| |||| | || | ||||||| ||| || || ||| |||| |||| Sbjct 1222 TTGGGCGA-AAATCTGTTGACAGGCA-AACTTCCTCCCTCATTGGGAGAA-CTTTCTGAA 1278 Query 1274 TTT-GCAG-GTGGTGGATCTCTATTCAAATGCAATATCGGGGGAAATACCATCTTATTTT 1331 || | | || || ||||||||||||| | | || || || |||||||||| || Sbjct 1279 TTGAGAAAAGTCTTG---CTCTATTCAAATGGACTGTCTGGAGAGATACCATCTTCCTTG 1335 Query 1332 GGCAACATGACTCGGTTG-CAGAAGCTCCATTTGAATAGCAATAGTTTCCACGGAAGAAT 1390 || || || | | || | || | || || || || ||| ||||| | ||||| || Sbjct 1336 GGGAATATCAGTGGGCTAACATAC-CTGTATCTGCTTAACAACAGTTTTGAAGGAAGCAT 1394 Query 1391 CCCT-CAGAGTCTTGGACGTTGTCAA-TAC-TTGCTAGACCTGTGGAT-T-GATACAAAT 1445 |||| || ||||||||| |||| || ||| || |||||| | || | | | ||| ||| Sbjct 1395 CCCTTCA-AGTCTTGGAAGTTG-CAGCTACCTT-CTAGAC-T-TGAACCTCGGTACTAAT 1449 Query 1446 AGGTTGAATGGGA-CTATACCTCGGGAAAT-ACTGCAAATTCCGTCCCTCG-CTTACATA 1502 | ||||||||| | | ||||| | || | | || || |||| || || | | | | || Sbjct 1450 AAGTTGAATGGCAGC-ATACCCCATGAGCTTA-TGGAACTTCCATCTCTTGTCGT-CTTA 1506 Query 1503 GATTTGTCAAACAATTTCTTGACCGGCCATTTTCCAGAAGA-AGTTGGAAAG-TTGGAAC 1560 || | ||| ||||| ||| |||| ||| | |||| | |||||||| || || Sbjct 1507 AATGTCTCATTTAATTTGTTGGTTGGCCCTTTGAGACAAGACA-TTGGAAAGCTTA-AAT 1564 Query 1561 TTCTTGTTGGA-CTAGGTGCTTCGTACAACAAATTATCAGGACAGATCCCACAAGC-TAT 1618 |||| || | |||| | ||| ||||| ||| ||||||||||||| |||||| | | | Sbjct 1565 TTCTA-TTAGCTCTAGACGTTTCATACAATAAACTATCAGGACAGATTCCACAAACCT-T 1622 Query 1619 AGGGGG-TTGTCTCTCGA-TGGAATTTCTTTATA-TGCAAGGAAATTCGTTTGACGGAGC 1675 || | ||||||||| | | ||||| |||| | ||||||| ||||| |||| || || Sbjct 1623 -GGCGAATTGTCTCTC-ACTAGAATTCCTTT-TGCTGCAAGGGAATTCATTTGTTGG-GC 1678 Query 1676 C-ATTCCAGATATAAGTCGGTTGG-TAAGCCTAACGAATGTT-GA-CTTCTCCAACAACA 1731 | |||||||||||||| ||||| | |||| | || | | || || || || || | Sbjct 1679 CCATTCCAGATATAAGAGGGTTGACTG-GCCTCA-GATTCCTAGATCTG-TCGAAGAATA 1735 Query 1732 ATCTCTCTGGC-CGGATACCTCGA-TATCTGGCCAA-TCTACCTTTGTTGC-GAAATCTG 1787 |||||||||| | |||||| || ||| |||| || | | || | || ||| ||| Sbjct 1736 ATCTCTCTGGTACA-ATACCT-GAATATATGGCGAACTTTTCCAAACT-GCAGAAC-CTG 1791 Query 1788 AATCTTTCTATGAACAATTTTGAGGGAAGC-GTGCCAACA-ACAGGAGTGTTCCGAAATG 1845 ||||| ||| ||||||| || || ||| || |||||||| | ||| || || || ||| Sbjct 1792 AATCTCTCTTTGAACAACTTCGACGGA-GCTGTGCCAACGGA-AGGGGTATTTCGTAATA 1849 Query 1846 CTACAGCAGTT-TCTGTTTTTGGTAACAAAAATATATGCGGAGGCATC 1892 | | || | | || || |||||||||| ||| | || ||||||||| Sbjct 1850 CCAGTGC-GATGTCGGTCTTTGGTAACATAAACCTCTGTGGAGGCATC 1896 > AT1G09995.1 | Symbols: | DNA repair DEAD helicase RAD3/XP-D subfamily protein | chr1:3262265-3263612 REVERSE LENGTH=724 Length=724 Score = 135 bits (73), Expect = 2e-30 Identities = 93/102 (91%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 121 AAGTTTTGCTTGAGTTCAAGTCTCAAGTTTCT-G-AA-AACAAGAGAGAGGTCTTGGCCT 177 ||| |||||||||||||||||||||||||||| | || ||||||||||||||| |||| | Sbjct 581 AAGCTTTGCTTGAGTTCAAGTCTCAAGTTTCTGGAAACAACAAGAGAGAGGTCATGGCTT 640 Query 178 CATGGAATCACTCCTCCCCATTATGCAATTGGATTGGAGTCA 219 ||||||||||||||||| |||| || |||||||||||||||| Sbjct 641 CATGGAATCACTCCTCCACATTTTGTAATTGGATTGGAGTCA 682 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 164146237496 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5