BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg488983 Length=773 Score E Sequences producing significant alignments: (Bits) Value AT5G20740.1 | Symbols: | Plant invertase/pectin methylesterase... 1053 0.0 > AT5G20740.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr5:7025686-7026532 REVERSE LENGTH=847 Length=847 Score = 1053 bits (570), Expect = 0.0 Identities = 690/747 (92%), Gaps = 11/747 (1%) Strand=Plus/Plus Query 1 ACATAACCCTAATTTGGTCTCTCACTCTAAGCCGATAGAGAATGGCTCCT-CGACACAAG 59 |||||||||||||||||||||| ||||||| |||| ||| |||||||||| | ||| || Sbjct 8 ACATAACCCTAATTTGGTCTCTTACTCTAACCCGAGAGATAATGGCTCCTAC-ACAAAAT 66 Query 60 CTCTTCCTCCTCGCTATTGTCTTCGCCATCATTGTCACCGCCACCACCGTACACGGTCGT 119 |||||||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||| Sbjct 67 CTCTTCCTTGTCGCTATTGCCTTCGCCGTCATTTTCACCGCCTCCACCGTACATGGTCGT 126 Query 120 CATAATGGTGCAAAAGATATCGTTCATTCCTCCTGCGAACACGCGAGCTACCCATCACTA 179 |||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 127 CATAATGGTGCAGAAGATATCGTGCATTCCTCCTGCGAACACGCGAGCTATCCATCACTA 186 Query 180 TGCGTCCGTACTCTTTCATCTTACTCCGGTCCAACCATCACCAACCGCCGTGACCTAGCT 239 ||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct 187 TGCGTCCGTACTCTTTCGTCATACTCCGGTCCAACCATCACCAACCGCCGCGATCTAGCT 246 Query 240 CAAGCCGCGGTCAAAATCAGCCTCTCCCACGCTCAAAGCGCCGCGAAGAAACTCACGGTG 299 |||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 247 CAAGCCGCCATAAAAATCAGCCTCTCCCACGCTCAAAGCGCCGCGAAGAAACTCGCGGTG 306 Query 300 GTGCGAGACTCGGTGGGGAAGAAGAGGCAAGAGAAAGCGGCGCTTGTGGACTGTGTGGAG 359 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 307 GTGCGAGACTCGGTGGGGAAGAAGAAGCAAGAGAAAGCGGCGCTTGTGGACTGTGTGGAG 366 Query 360 ATGATTGGAGACTCGGTGGACGATTTAAGCCGCACCCTCGGCGTTTTGAAGCACCTCCGT 419 |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||||| Sbjct 367 ATGATTGGAGACTCTGTGGACGAGCTAAGCCGTACGCTCGGCGTTTTGAAGCACCTCCGT 426 Query 420 ATCTCTGGCGGTTC-GCCTAAAGAGTTCCGGTGGCAGATGAGCAATGCACAGACGTGGGC 478 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 GTCTCTGGCGGTTCAG-CTAAAGAGTTCCGGTGGCAGATGAGCAATGCACAGACGTGGGC 485 Query 479 TAGCGCGGCGCTTACCGATGACGACACGTGTCTCGATGGGTTTGAAGAGAT---CGACGG 535 ||||||||| ||||| ||||||||||||||||||||||||||| ||| ||| |||||| Sbjct 486 TAGCGCGGCACTTACGGATGACGACACGTGTCTCGATGGGTTTCAAGGGATGGACGACGG 545 Query 536 TGATATCAAAACGGAGGTGAAACAGTGGATGACGAAGGTGGCCAGGGTTACGAGCAACGC 595 ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 546 TGAAATCAAAACGGAGGTGAAGCAGTGGATGACGAAAGTGGCCAGGGTTACGAGCAACGC 605 Query 596 GCTTTACATGATCAACCAGCTAGATGAGACACGTGGCAAACCCCACGACGTACATCTTTG 655 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 606 GCTTTACATGGTCAACCAGCTAGATGAGACACGTGGCAAACCCCACGACGTACATCTTTG 665 Query 656 ATGTTAATGCACTAGATCGTTT-AATGGACGGTCGTGGTTGTGTGT-T-GGtttttttAT 712 |||||||||||||||||||||| ||||||||||| | |||||||| | ||||||| | Sbjct 666 ATGTTAATGCACTAGATCGTTTTAATGGACGGTCTTTATTGTGTGTGTTGGTTTTTCG-T 724 Query 713 TCGTGTGTTTTAATTGTGAGATTATCT 739 || |||||||||| ||||||||||||| Sbjct 725 TCATGTGTTTTAAGTGTGAGATTATCT 751 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37575141956 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5