BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489025
Length=2940
Score E
Sequences producing significant alignments: (Bits) Value
AT5G21150.1 | Symbols: AGO9 | Argonaute family protein | chr5:7... 4368 0.0
AT5G21030.1 | Symbols: | PAZ domain-containing protein / piwi ... 977 0.0
> AT5G21150.1 | Symbols: AGO9 | Argonaute family protein | chr5:7192239-7198324
FORWARD LENGTH=3018
Length=3018
Score = 4368 bits (2365), Expect = 0.0
Identities = 2764/2953 (94%), Gaps = 42/2953 (1%)
Strand=Plus/Plus
Query 1 ACAAACAAACCCTTTCTTCTTCCTCTCATAAT--CTCTCtttttttttCTCGCTCGCTCG 58
|||||||||||||||||||||||||||||||| |||||| | || ||||| ||||||||
Sbjct 8 ACAAACAAACCCTTTCTTCTTCCTCTCATAATCCCTCTCTCTCTTCTTCTCTCTCGCTCG 67
Query 59 CTGCTCTGTTTAGGGTTTTT-TCGTTCCT-TCTGATTTTTGTACTCCAGAGATGGTTTCT 116
|||||||||||||||||||| |||||| | ||| | | ||||| |||||||| ||||
Sbjct 68 CTGCTCTGTTTAGGGTTTTTCTCGTTCGTCTCTTCTATAAGTACT--AGAGATGGATTCT 125
Query 117 AATGAACCGAATGGGAGTGGCGTAATGCAAAAGGGAGGGTTACCACCTCCACCACCTGTC 176
||||||||||||||| | | ||| |||||||||||||||||| ||
Sbjct 126 GATGAACCGAATGGGA-----G---T-------GGA---TTACCACCTCCACCACCTTTC 167
Query 177 GTTCCAACAAATGTTGTCCCTGAAGTGGAGCCTGTAAAAAAGAACATTCTTCTCCCAATG 236
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 168 GTTCCAGCAAATCTTGTCCCTGAAGTGGAGCCTGTAAAAAAGAACATTCTTCTCCCAATG 227
Query 237 GCTCGGCCTAGAGGCAGTGGTTCCAAAGGACAGAAGATTCCTCTTCTTACTAATCACTTT 296
||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 228 GCTCGGCCTCGAGGCAGCGGCTCCAAAGGACAGAAGATTCCTCTTCTTACTAATCACTTT 287
Query 297 GGAGTCAAGTTTAACAAAGCAAGCGGTTACTTCTTTCATTACAGTGTTGCTATCTCA-TA 355
||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 288 GGAGTCAAGTTCAACAAACCAAGCGGTTACTTCTTTCATTACAGTGTTGCTATC-AATTA 346
Query 356 TGAAGATGGCCGTCCAGTGGAGGCTAAAGGTATTGGCAGAAAGATTCTTGACAAAGTTCA 415
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 347 TGAAGATGGCCGTCCAGTGGAGGCTAAAGGTATCGGCCGAAAGATTCTTGACAAAGTTCA 406
Query 416 GGAGACCTATCAAAGTGATTTGGGGT-CCAAATACTTTGCTTATGATGGCGAGAAGACTC 474
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 407 GGAGACCTATCAAAGTGATTT-GGGTGCCAAATACTTTGCTTATGATGGCGAGAAGACTC 465
Query 475 TCTTCACTGTTGGTGCTCTTCCCAGCAACAAACTTGACTTCTCTGTTGTTCTTGAAGACA 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 466 TCTTCACTGTTGGTGCTCTTCCCAGCAACAAACTTGACTTCTCTGTTGTTCTTGAAGAAA 525
Query 535 TACCTTCTAGCAGAAATAACGCTGGAAATGATACAAATGATGCGGATAGGAAAAGATCAA 594
||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 526 TACCTTCTAGCAGAAATCACGCTGGAAATGATACAAATGATGCTGATAGAAAAAGATCAA 585
Query 595 GGCGTCCCAACCAATCTAAGAAATTCATGGTTGAGATAAGTTATGCTGCAAAGATCCCCA 654
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 586 GGCGTCCCAACCAAACTAAGAAATTCATGGTTGAGATAAGTTATGCTGCAAAGATCCCCA 645
Query 655 TGCAGGCTATTGCAAGCGCTCTTCAAGGGAAGGAGACAGAGAATCTTCAAGACGCTCTAA 714
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 646 TGCAGGCTATTGCAAGCGCTCTTCAAGGGAAGGAGACAGAGAATCTTCAAGACGCTCTGA 705
Query 715 GAGTGCTGGATATTATTTTGCGCCAGAGTGCAGCTAGGCAAGGTTGCCTCCTTGTTCGCC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GAGTGCTGGATATTATTTTGCGCCAGAGTGCAGCTAGGCAAGGTTGCCTCCTTGTTCGCC 765
Query 775 AGTCTTTTTTCCACAATGACGTAAAGAACTTTGTACCTATTGGTGGAGGTGTCAGTGGTT 834
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 AGTCCTTTTTCCACAATGACGTAAAGAACTTTGTACCTATTGGTGGAGGTGTCAGTGGTT 825
Query 835 GCAGAGGGTTCCATTCAAGTTTCAGAACTACTCAGGGAGGCTTATCCCTGAATATTGACA 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 GCAGAGGGTTCCATTCAAGTTTCAGAACTACTCAGGGAGGCTTATCCCTGAATATTGACA 885
Query 895 CTTCAACTACGATGATTGTACAACCTGGACCTGTTGTTGATTTCCTGCTTGCAAACCAGA 954
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 886 CTTCAACTACGATGATAGTACAACCTGGACCTGTAGTTGATTTCCTGCTTGCTAACCAGA 945
Query 955 ACAAGAAAGATCCATACGGTGTGGACTGGAACAAGGCTCGTCGTGTTCTCAAGAATCTGA 1014
||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||
Sbjct 946 ACAAGAAAGATCCATACGGAATGGACTGGAACAAGGCTCGACGTGTCCTCAAGAATCTGA 1005
Query 1015 GAGTTCAAGTTACTCTTTCAAATAGAGAATACAAGATAAGCGGGCTAAGTGAACACAGCT 1074
|||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 1006 GAGTTCAAATTACTCTTTCCAATAGAGAATACAAGATAAGTGGACTAAGTGAACACAGCT 1065
Query 1075 GCAAAGATCAAATGTTTACATGGAGGAAACCTAACGACAAGGGGGAATTTGAGGAGGTTG 1134
||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1066 GCAAAGATCAACTATTTACATGGAGGAAACCTAACGACAAGGGAGAATTTGAGGAGGTTG 1125
Query 1135 AGATCACAGTGCTCAATTACTATAAAGAGCGTAGTATTGAAGTGCGATATTCAGGTGACT 1194
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1126 AGATCACAGTGCTCAATTACTATAAAGAGCGTAACATTGAAGTGCGTTATTCAGGTGACT 1185
Query 1195 TCCCTTGCATCAATGTTGGTAAGCCGAAGCGTCCCACTTACTTCCCCATTGAGTTCTGTA 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 TCCCTTGCATCAATGTTGGTAAGCCGAAGCGTCCCACTTACTTCCCCATTGAGTTCTGTA 1245
Query 1255 ATCTTGTGTCTCTTCAGCGATACACAAAATCGCTTACCAATTTTCAGAGGGCTGCACTAG 1314
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1246 ATCTTGTGTCTCTACAGCGATACACAAAATCGCTTACCAATTTTCAGAGGGCTGCCCTAG 1305
Query 1315 TAGAAAAGTCTAGGCAGAAGCCACCAGAAAGGATGGCCTCACTAACCAAAGGTCTAAAGG 1374
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 1306 TTGAAAAGTCTAGGCAGAAGCCACCTGAAAGGATGGCCTCGCTAACCAAAGGTCTGAAGG 1365
Query 1375 ACAGCAATTATAATGCCGACCCGGTGTTGCAAGATAGTGGTGTCAGCATTATTACCAACT 1434
|||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct 1366 ACAGCAATTACAATGCCGACCCGGTATTGCAAGATAGTGGTGTTAGCATTATCACCAATT 1425
Query 1435 TCACCCAAGTTGAAGGCCGCATCTTACCAACACCAAAGCTGAAAGTGGGGAACGGACAGG 1494
| ||||||||||||||||| |||||||||||||||| |||||||||||| || ||| |
Sbjct 1426 TTACCCAAGTTGAAGGCCGTATCTTACCAACACCAATGCTGAAAGTGGGCAAGGGAGAAA 1485
Query 1495 AC-TTTACCCCAAACAACGGGCGCTGGAACTTTAATAGC--AGGAAACTTGTTGAGCCAA 1551
|| ||| |||||| ||| || |||||||||| | || | || ||| | ||||||||
Sbjct 1486 ACCTTT-CCCCAATCAAAGGAAAATGGAACTTTA-T-GCGTAAGACACTCGCTGAGCCAA 1542
Query 1552 CGACTGTTACTAGATGGGCTGTTGTGAACTTTTCTGCTCGTTGTGATACAAATGCGCTTA 1611
|||| |||||||||||||||||||||||||| |||||||| |||||||||||| | ||||
Sbjct 1543 CGACGGTTACTAGATGGGCTGTTGTGAACTTCTCTGCTCGCTGTGATACAAATACACTTA 1602
Query 1612 TTCGCGACTTGATTAGATGTGGACAGTCA-AAAGGAATTAATGTAGAGCCTCCATTCAAG 1670
|||| |||||||||| |||||||| | | ||||||||||||||||||||||||||||||
Sbjct 1603 TTCGTGACTTGATTAAATGTGGACGGG-AGAAAGGAATTAATGTAGAGCCTCCATTCAAG 1661
Query 1671 GATGTCATTAACGAAAATCCTCAGTTTAGGAATGCACCAGCTACTGTGAGAGTAGAGAAT 1730
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 GATGTCATCAACGAGAATCCTCAGTTTAGGAATGCACCAGCTACTGTGAGAGTAGAGAAT 1721
Query 1731 ATGTTTGAGCAGATAAAATCCAAACTCCCAGGGCAGCCTCTGTTCCTACTTTGCATACTC 1790
|||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct 1722 ATGTTTGAGCAGATAAAATCCAAACTCCCAAAGCCGCCTCTGTTCCTTCTTTGCATACTC 1781
Query 1791 TCAGAAAGGAAAAACTCTGATGTTTATGGCCCTTGGaaaaaaaaGAATCTTGTTGATCTT 1850
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1782 GCTGAAAGGAAAAACTCTGATGTTTATGGCCCTTGGAAAAAAAAGAATCTTGTTGATCTT 1841
Query 1851 GGAATTGTGACTCAGTGCATTGCTCCCACAAGAGTGAACGATCAGTATCTCACCAATGTT 1910
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1842 GGAATTGTGACTCAGTGCATTGCTCCCACCAGACTGAACGATCAGTATCTCACCAATGTT 1901
Query 1911 CTCCTGAAGATAAATGCCAAGCTTGGTGGATTGAATTCGCTGTTAGCAATAGAGCGCTCA 1970
||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct 1902 CTCCTGAAGATAAATGCCAAGCTTGGTGGATTGAATTCGTTGTTAGCTATGGAGCGCTCA 1961
Query 1971 CCAGCAATGCCAAAAGTAACGCAAGTTCCTACTATCATTGTTGGGATGGATGTATCCCAT 2030
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1962 CCAGCAATGCCAAAAGTAACGCAAGTTCCTACCATCATTGTTGGGATGGATGTATCCCAT 2021
Query 2031 GGTTCCCCTGGCCAGTCTGATATACCATCAATTGCAGCGGTTGTGAGCTCCAGACAATGG 2090
||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct 2022 GGTTCCCCTGGCCAGTCTGATATACCATCAATTGCTGCTGTTGTGAGCTCAAGACAATGG 2081
Query 2091 CCACTCATCTCAAAATATAAGGCATGTGTACGCACACAATCGCGCAAAATGGAAATGATT 2150
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2082 CCACTCATCTCAAAATATAAGGCATGTGTACGCACACAATCACGCAAAATGGAAATGATT 2141
Query 2151 GATAATCTCTTCAAACCCGTCTCTGGCAAAGACGAAGGAATGTTCAGGGAGCTGTTGCTC 2210
||||||||||||||||||||| ||||||||||||||||||||||||||| || ||| |
Sbjct 2142 GATAATCTCTTCAAACCCGTCAATGGCAAAGACGAAGGAATGTTCAGGGAACTCTTGTTA 2201
Query 2211 GACTTTTACTACAGTTCTGAGAAGAGGAAACCAGAGCACATCATTATATTCAGGGATGGT 2270
||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 2202 GACTTTTACTACAGTTCAGAGAATAGGAAACCAGAGCACATCATTATTTTCAGGGATGGT 2261
Query 2271 GTGAGTGAGTCTCAGTTCAATCAAGTTCTTAATATTGAATTGGATCAGATGATGCAGGCA 2330
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2262 GTAAGCGAGTCTCAGTTCAATCAAGTTCTTAATATTGAATTGGATCAGATGATGCAGGCA 2321
Query 2331 TGCAAGTTTCTTGACGA-ACACTGGAATCCAAAGTTTACAGTGATCGTTGCCCAGAAGAA 2389
|||||||||||||| || || ||| |||| |||||||||||||| ||||||||||||||
Sbjct 2322 TGCAAGTTTCTTGATGATACG-TGGCATCCGAAGTTTACAGTGATAGTTGCCCAGAAGAA 2380
Query 2390 CCACCACACCAAGTTCTTCCAGTC--GAGTCGCCCTGATAATGTTCCTCCAGGAACAATA 2447
||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 2381 CCACCACACAAAGTTCTTCCAGTCTCGAG--GCCCTGATAATGTTCCTCCAGGAACAATC 2438
Query 2448 ATTGACAGCCAGATCTGTCACCCACGCAACTTTGATTTCTATCTCTGCGCCCATGCCGGC 2507
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2439 ATTGACAGCCAGATCTGTCACCCACGCAACTTTGATTTCTATCTCTGCGCCCATGCTGGC 2498
Query 2508 ATGATTGGAACTACAAGGCCAACACATTACCATGTGCTGTATGACGAGATTGGATTTGCC 2567
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2499 ATGATTGGAACTACAAGGCCAACACATTACCATGTTCTGTATGACGAGATTGGGTTTGCC 2558
Query 2568 ACAGATGACCTTCAAGAACTTGTGCATTCTCTATCCTATGTCTACCAGAGGAGCACTACT 2627
||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2559 ACAGACGACCTCCAAGAACTTGTGCATTCTCTGTCCTATGTCTACCAGAGGAGCACCACT 2618
Query 2628 GCGATCTCAGTCGTTGCACCAGTTTGTTATGCGCATTTGGCAGCTGCACAGATGGGAACT 2687
|||||||||||||||||||| || ||||| || |||||||||||||||||||||||||||
Sbjct 2619 GCGATCTCAGTCGTTGCACCTGTATGTTACGCTCATTTGGCAGCTGCACAGATGGGAACT 2678
Query 2688 GTGATGAAGTATGAAGAGTTGTCTGAGACTTCTTCGAGCCATGGGGGAATCACCACACCC 2747
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2679 GTGATGAAGTATGAAGAGTTGTCTGAGACTTCTTCGAGCCATGGAGGAATCACCACACCT 2738
Query 2748 GGAGCAGTCCCTGTGCCTCCCATGCCGCAGCTGAACGATAAAGTTGCAACCTCCATGTTC 2807
||||||||||||||||| || |||||||||||| || |||| ||| ||||||||||||||
Sbjct 2739 GGAGCAGTCCCTGTGCCACCTATGCCGCAGCTGCACAATAATGTTTCAACCTCCATGTTC 2798
Query 2808 TTCTGCTGATGGAACATGGCCCAGTCCCCACGGTAGCTGAGTTTATATGCTTTTGATGGA 2867
||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||
Sbjct 2799 TTCTGTTGATGGAACATGGTCCAGTCCACACGATAGCTGAGTTTATATGCTTTTGATGGA 2858
Query 2868 GAACCAACGAACTTTTGTTTACTCTTCTCTGGGTTCGATGCCTCTTTTGTTTTTCGTCGA 2927
||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 2859 GAACCAACGAACTTTTGTTTACTCTTCTCTGGGTTTGGTTCCTCTTTTGTTTTTCGTCGA 2918
Query 2928 CCCTTTAACATTG 2940
|||||||||||||
Sbjct 2919 CCCTTTAACATTG 2931
> AT5G21030.1 | Symbols: | PAZ domain-containing protein / piwi
domain-containing protein | chr5:7139892-7144272 REVERSE LENGTH=2553
Length=2553
Score = 977 bits (529), Expect = 0.0
Identities = 1659/2176 (76%), Gaps = 191/2176 (9%)
Strand=Plus/Plus
Query 224 TCTTCTCCCAATGGCTCGGCCTAGAGGCAGTGGTTCCAAAGGACAGAAGATTCCTCTTCT 283
|||||| |||||| ||| ||| | |||| |||||||||||||||||||||| ||| ||
Sbjct 63 TCTTCTTCCAATGACTC-GCC--GTGGCAACGGTTCCAAAGGACAGAAGATTCTTCTGCT 119
Query 284 TACTAATCACTTTGGAGTCAAGTTTA-ACAAAGCAAGCGGT--T-ACTTCTTTCATTACA 339
||||| ||||| ||||||| || | | ||| ||| | || | | ||||| |||||||
Sbjct 120 CACTAACCACTTCAGAGTCAACTTCAGA-AAACCAAACAGTCATAATTTCTTCCATTACA 178
Query 340 GTGTTGCTATCTCATATGAAGATGGCCGTCCA-GTGGAGGCTAAAGGTATTGGCAGAAAG 398
| ||| ||||| ||||||||||||| ||||| | | || |||||| |||||||||||
Sbjct 179 GCGTTACTATCACATATGAAGATGGTAGTCCACTTTTA-GCCAAAGGTTTTGGCAGAAAG 237
Query 399 ATTCTTGACAAAGTTCAGGAGACCTATCAAAG-TGATTTGGGGTCCAAATACTTTGCTTA 457
|||||||| |||||||| |||| | || ||| ||||||||| | |||| | ||||||||
Sbjct 238 ATTCTTGAAAAAGTTCAACAGACTTGTC-AAGCTGATTTGGGTTGCAAACATTTTGCTTA 296
Query 458 TGATGGCGAGAAGACTCTCTT-CACTGTTGGTGCTCTTCCCAGCA-ACAAACTTGACTTC 515
||||||||| |||| ||| || ||||||||| ||||||| || | || || ||||||
Sbjct 297 TGATGGCGACAAGAATCT-TTATACTGTTGGTCCTCTTCCTAG-ATCCAGTCTAGACTTC 354
Query 516 TCTGTTGTTCTTGAAGA-CATACCTTCTAGCAGAAATAACGCTGGAAATGATACAAATGA 574
||||||||||||||| | | |||||||| || | ||||| | | ||||| ||
Sbjct 355 TCTGTTGTTCTTGAA-ACCGCGCCTTCTAG--GAGA-AACGC-----A-G--ACAAAAGA 402
Query 575 TGCGGATAGGAAAAGATCAAGGCGTCC-CAACCAATCTAAGAAATTC-ATGGTTG-AGAT 631
| | | || || ||| | ||||||| ||||||||| || |||| | ||
Sbjct 403 --C---T--------A--AA-GCTTCCTC-ACCAATCCAAGAAATTCAAT-GTTGCA-AT 443
Query 632 AAGTTAT--G-CTGCA-AAGATCCCCATGCAGGCTATTGCAAGCGCTCTTCAAGGGAAGG 687
|| | | || || || ||||| ||| | |||||||||| ||||||||||| |||
Sbjct 444 CCTTTTTGCGCCTCCAGAA-ATCCCAATGGAAGCTATTGCAAATGCTCTTCAAGGAAAGA 502
Query 688 AGACAGAGA-ATCTTCAAGACGCTCTAAGAGTGCTGGATAT-TATTTTGCGCCAGAGTGC 745
| || | | |||||| ||| ||| | |||||| |||| | ||||||| |||| | |||
Sbjct 503 AAAC-TAAACATCTTCTAGATGCTATCAGAGTGATGGA-CTGTATTTTGAGCCAAAATGC 560
Query 746 AGCTAGGCAAGGTTGCCTCCTTGTTCGCCAGTCTTTTTTCCACAATGACGTAAAGAACTT 805
|||||| |||||||||||||| ||||| || ||||| ||||||||||||| |||| ||||
Sbjct 561 AGCTAGACAAGGTTGCCTCCTAGTTCGGCAATCTTTCTTCCACAATGACGCAAAGTACTT 620
Query 806 TG-TACCTATTGGTGGAGGTGTCAG-TGGTTGCAGAGGGTTCCATTCAAGTTTCAGAACT 863
|| | ||| |||| |||||| || | |||||| ||| || |||||||| |||||||||
Sbjct 621 TGCGA-ATATCGGTGAAGGTGT-AGATTGTTGCAAAGGATTTCATTCAAGCTTCAGAACT 678
Query 864 ACTCAGGGAGGCTTATCCCTGAATATTGACACTTCAACTACGATGATTGTACAACCTGGA 923
|||||||||||||| ||||| |||||||| ||| ||| | ||||| ||| |||||||
Sbjct 679 ACTCAGGGAGGCTTGTCCCTCAATATTGATGTTTCGACTGCTATGATAGTAAAACCTGGT 738
Query 924 CCTGTTGTTGATTTCCTGCTTGCAAA-CCAGAACAAGAAAGATCCATACGGTGTGGACTG 982
|||||||||||||| || ||||||| | || ||| ||||||| | | | ||||
Sbjct 739 CCTGTTGTTGATTTTCTTATTGCAAATCAAG-GTGTGAACGATCCATTCTCTATTAACTG 797
Query 983 GAACAAGGCTCGTCGTGTTCTCAAGAATCTGAGAGTTCAAGTTACT-CTTTCAAAT-AGA 1040
||| |||||| | ||| || ||||| |||||| ||| | || | ||||||| | |
Sbjct 798 GAAAAAGGCTAAAAATACTCTGAAAAATCTTAGAGTTAAAG-TCCTCCCTTCAAATCA-A 855
Query 1041 GAATACAAGATAAGCGGGCTAAGTGAAC-ACAGCTGCAAAGATCAAATGTTTACATGGAG 1099
||||||||||||| ||| ||||||| || ||| |||||||||||||| |||||| ||||
Sbjct 856 GAATACAAGATAACCGGACTAAGTGGACTACA-CTGCAAAGATCAAACGTTTACTTGGAA 914
Query 1100 GAAACCTAACGACAAGGGGGAATTTGAGGAGGTTGAGATCACAGTGCT-CAATTAC-T-A 1156
|||| ||| | || |||||||||||||||||||||| |||||| | | ||||| | |
Sbjct 915 GAAAAGGAACCAAAACAGGGAATTTGAGGAGGTTGAGATTACAGTG-TCCGATTACTTCA 973
Query 1157 -TAAAGA-GCGTAG-TATTGAAGTGCGATATTCAGGTGACTTCCCTTGCATCAATGTTGG 1213
| | || ||| | || ||| |||| || || |||| ||| ||||| |||||||||||
Sbjct 974 CT-AGGATCCGT-GAAATCGAACTGCGTTACTCGGGTGGCTTACCTTGTATCAATGTTGG 1031
Query 1214 TAAGCCGAAGCGTCCCACTTACTTCCCCATTGAGTTCTGTAATCTTGTGTCTCTTCAGCG 1273
|||||| || ||||| || ||||| ||||||||| ||||| | ||||| ||||| || ||
Sbjct 1032 TAAGCCAAATCGTCCTACCTACTTTCCCATTGAGCTCTGTGAGCTTGTATCTCTACAACG 1091
Query 1274 ATACACAAAATCGCTTACCAATTTTCAGAGG-GCTGCA-C-TAGTAGAAA-AGTCTAGGC 1329
|| || ||| |||| ||||| || |||||| | | | | || | ||| | || ||||
Sbjct 1092 CTATACTAAAGCGCTAACCAAATTCCAGAGGAG-T-AACCTTA-T-CAAAGAATCAAGGC 1147
Query 1330 AGAAGCCACCAGAAAGGA-TGGCCTCACTAACCAAAGGTCTAAAGGAC-AGCAATTATAA 1387
|||| |||| | |||| | ||| | |||||| || ||| || ||| || ||||||||
Sbjct 1148 AGAATCCACAACAAAGAATTGGTGT-GTTAACCAGAGCTCTCAA-GACTAGTAATTATAA 1205
Query 1388 TGCCGACCCGGTGTTGCAAG-ATAGTGGTGTCAGCATT-ATTACCAACTTCACCCAAGTT 1445
|| ||||| ||||||||| || ||||||| || ||| | | ||||||| |||||
Sbjct 1206 TGATGACCCAATGTTGCAAGAAT-GTGGTGTTAGGATTGGCT-CTGACTTCACTCAAGTC 1263
Query 1446 GAAGGCCGCATCTTACCAACACCAAAGCTGAAAG-TGGGGAACGGACAGGAC-TTTACCC 1503
||||||||| | ||||||||||||||||| |||| | || || | ||| ||| | || |
Sbjct 1264 GAAGGCCGCGTGTTACCAACACCAAAGCTTAAAGCT-GGCAAAGAACAAGACATCTA-TC 1321
Query 1504 CAAACAACGGGCGCTGGAACTTTAATAGCAGGAAACTTGTTGAGCCAACGACTGTTACTA 1563
| | || ||| | |||||| | | || | ||| ||||| | || |||||||
Sbjct 1322 CTATTAATGGGAGTTGGAAC--T--T--CAAG-AAC-----AAGCCAGCCACAGTTACTA 1369
Query 1564 GATGGGCTGTTGTGAACTTTTCTGCTCGTTGTGA--TACAAATGCGCTTATTCG-CGACT 1620
||||||||||||||||||| |||||||| ||||| |||| | ||||| | || |
Sbjct 1370 GATGGGCTGTTGTGAACTTCTCTGCTCGCTGTGACCCGCAAA--AGATTATT-GATGATT 1426
Query 1621 TGATTAGATGTGGACAG-TCAAAAGGAATTAATGTAGAGCCTCCATTCAAGGAT-GTCAT 1678
||| ||||||||| || | ||||||||||| ||||| |||||| | | | | ||| |
Sbjct 1427 TGACCAGATGTGGAAAGAT-GAAAGGAATTAACGTAGATTCTCCATACCATG-TCGTCTT 1484
Query 1679 T-AACGAAAATCCTCAGTTT-AGGAATG-CACCAGCTACTGTGAGAGTAGAGAATATGTT 1735
| || ||||||||||||||| ||| ||| || | | | |||| ||||| || || |||||
Sbjct 1485 TGAA-GAAAATCCTCAGTTTAAGG-ATGCCA-CTGGTTCTGTAAGAGTTGATAAGATGTT 1541
Query 1736 TGAGCAGATAAAATCCAA-ACTCCCAGG-GCAG--CCT-C--TGTTCCTACTTTGCATAC 1788
| | || || ||| ||| ||| | || | || ||| | ||||| || ||||||
Sbjct 1542 TCAACATTTACAAT-CAATACT--C-GGCGAAGTTCCTCCAAAATTCCTTCTATGCATA- 1596
Query 1789 TCTCAGAAAGGAAAAACTCTGATGTTTATGGCCCTTGGaaaaaaaaGAATCTTGTT-GAT 1847
||| |||| |||||||||||||||||| | | ||| ||||||||| ||
Sbjct 1597 -CTC-GAAAAGAAAAACTCTGATGTTTA-------T-G-----AAA-AATCTTGTTCAAT 1640
Query 1848 CTTGGAATTGTGACTCAGTGCATTGCT-C-CCACAAGA-GTGAACGATCAGTATCTCACC 1904
||||||||||| | || |||| | | || ||| | | || ||||||||||||||
Sbjct 1641 -GTGGAATTGTGA---A-TGTATTGTTCCTCCTCAAAACTTAAATGATCAGTATCTCACA 1695
Query 1905 AATGTTCTCCTGAAGATAAATGCCAAGCTTGGTGGATTGAATTC-GCTGTTAGCA-ATAG 1962
||| |||| || |||||||||||||||||||||||||||||||| | | || | | || |
Sbjct 1696 AATCTTCTACTAAAGATAAATGCCAAGCTTGGTGGATTGAATTCAGTT-TTGG-ATATGG 1753
Query 1963 AGC-GCTCACCAGCAATGCCAAAAGTAACGCA-AGTTCCTACTATCATTGTTGGGATGGA 2020
||| | ||| | ||||||| |||| | | ||||||||| |||||| |||| |||||
Sbjct 1754 AGCTG-TCAGGAACAATGCCTCTGGTAATG-AGAGTTCCTACCATCATTATTGGAATGGA 1811
Query 2021 TGTATCCCATGGTTCCCCTGGCCAGTCTGAT-ATA--CCATCAATTGCAGCGGTTGTGAG 2077
|||||| |||||||| ||||| ||||||||| ||| ||||| ||||| |||||||||||
Sbjct 1812 TGTATCTCATGGTTCTCCTGGACAGTCTGATCATATACCATCCATTGCCGCGGTTGTGAG 1871
Query 2078 CTCCAGACAATGGCCACTCATCTCAAAATATAAGGCATGTGTACGCACACAATCGCGCAA 2137
||||||| | |||||||| ||||||||||| | ||| ||||| || ||||| |||| | |
Sbjct 1872 CTCCAGAGAGTGGCCACTGATCTCAAAATACAGGGCTTGTGTGCGTACACAGTCGC-CTA 1930
Query 2138 AA-TGGAAATGATTGATAATCTCTTCAAACCCGTCTCTGGCAAAGACGAAGGAATGT-TC 2195
|| | |||||||| |||| ||||| ||||||||||||| |||||| || || || ||
Sbjct 1931 AAGTTGAAATGATCGATAGCCTCTTTAAACCCGTCTCTGACAAAGATGATC-AAGGTATC 1989
Query 2196 A-G-G-GAGCTGTTGCTCGACTTTTACTACA-GTTCTGAGAAGAGGAAACCAGAG-CACA 2250
| | | ||||| ||||| |||||| ||| || |||||| ||| || ||||| || ||||
Sbjct 1990 ATGAGAGAGCTCTTGCTTGACTTTCACT-CAAGTTCTG-GAA-AG-AAACC-GAATCACA 2044
Query 2251 TCATTATATTCAGGGATGGTGTGAGTGAGTCTCAGTTCAATCAAGTTCTTAATATTGAAT 2310
| || || |||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct 2045 TTATCATTTTCAGGGATGGTGTCAGTGAATCTCAGTTTAACCAAGTTCTTAATATTGAAC 2104
Query 2311 TGGATCAGATGATGCA 2326
||||||||||||||||
Sbjct 2105 TGGATCAGATGATGCA 2120
Score = 438 bits (237), Expect = 1e-121
Identities = 369/433 (85%), Gaps = 8/433 (2%)
Strand=Plus/Plus
Query 2388 AACCACCACACCAAGTTCTTCC-AGTCGAGTCGCCCTGATAATGTTCCTCCAGGAACAAT 2446
||||||||||| |||||||||| | ||| ||||| ||||||||| ||||||||||||
Sbjct 2125 AACCACCACACGAAGTTCTTCCAAACCGA-AAGCCCTAATAATGTTCTTCCAGGAACAAT 2183
Query 2447 AATTGACAGCCAGATCTGTCACCCACGCAACTTTGATTTCTATCTCTGCGCCCATGCCGG 2506
|||||||||| | |||||||||| || |||| ||||||||||| || || ||||| ||
Sbjct 2184 AATTGACAGCAACATCTGTCACCAACACAACAACGATTTCTATCTTTGTGCTCATGCTGG 2243
Query 2507 CATGATTGGAACTACAAGGCCAACACATTACCATGTGCTGTATGACGAGATTGGATTTGC 2566
| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 2244 AAAGATTGGAACTACAAGGCCAACACATTACCATGTGCTCTACGACGAGATTGGATTTGA 2303
Query 2567 CACAGATGACCTTCAAGAACTTGTGCATTCTCTATCCTATGTCTACCAGAGGAGCACTAC 2626
||||||| | || ||||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct 2304 CACAGATCAACTCCAAGAACTTGTGCATTCACTATCCTATGTCTACCAGCGGAGCACAAC 2363
Query 2627 TGCGATCTCAGTCGTTGCACCAGTT-TGTTATGCGCATTTGGCAGCTGCACAGATGGGAA 2685
||| ||||| | ||||| || | | |||||||| |||||||| ||||||||||||| ||
Sbjct 2364 TGCCATCTCTCTTGTTGCGCC-GATATGTTATGCTCATTTGGCGGCTGCACAGATGGCAA 2422
Query 2686 CTGTGATGAAGTATGAAGAGTTGTCTGAGACTTCTTCGAGCCATGG-GGGAATCACCACA 2744
||| ||||||| ||| || ||||||||||||| |||||||| || |||| ||||||||
Sbjct 2423 CTGCAATGAAGTTTGAGGACATGTCTGAGACTTCATCGAGCCACGGCGGGA-TCACCACA 2481
Query 2745 CCCGGAGCAGTCCCTGTGCCTCCCATGCCGCAGCTGAACGATAAA-GTTGCAACCTCCAT 2803
| ||||||||||||||||||||||||||| |||||||| | || ||||| | || ||
Sbjct 2482 GCTGGAGCAGTCCCTGTGCCTCCCATGCCGAAGCTGAAC-ACCAACGTTGCTAGTTCAAT 2540
Query 2804 GTTCTTCTGCTGA 2816
|||||| ||||||
Sbjct 2541 GTTCTTTTGCTGA 2553
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 146136304959
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5