BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489036 Length=312 Score E Sequences producing significant alignments: (Bits) Value AT5G21910.1 | Symbols: | unknown protein; Has 30201 Blast hits... 499 5e-141 > AT5G21910.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7240659-7241746 FORWARD LENGTH=1088 Length=1088 Score = 499 bits (270), Expect = 5e-141 Identities = 298/312 (96%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 1 ATGGGGAGGTTTACTACGTCCTGGAAACTTTTGGCCATAAGCTTGTCGGTACTAGCCGTG 60 ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct 158 ATGGGGAGGTTTACTACTTCCAGGAAGCTTTTGGCCATAAGCTTGTCGGTACTAGCCGTG 217 Query 61 CTCTCACCTCTCTACATCGACAGATTATCAGAGGAAGATCTAGAAGAGGAAGAAGAACTC 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 218 CTCTCACCACTCTACATCGACAGATTATCAGAGGAAGATCTAGAAGAGGAAGAAGAACTC 277 Query 121 TTCGGCTTTATGTTTACCCTCTCTCTGCTTCTCCTCTTGTTGATTTTGGCCATTGCCTTG 180 ||| ||||||||||| || |||||||||||||||||||||||||||| ||||| |||||| Sbjct 278 TTCAGCTTTATGTTTTCCTTCTCTCTGCTTCTCCTCTTGTTGATTTTAGCCATAGCCTTG 337 Query 181 TCCCTGTATTGTGACCCTAGCTTGACCAGGTTTGATCCTTACTGGATTCACAGGCTATGT 240 ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 338 TCCTTGTACAGTGACCCGAGCTTGACCAGGTTTGATCCTTACTGGATTCACAGGCTATGT 397 Query 241 GGTTCGTTTGGTGGATTGCTTGTCATCCTCATCCTTCTTGTTTTCGTCTTGATATGCAAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 398 GGTTCGTTTGGTGGATTGCTTGTCATCCTCATCCTTCTTGTTTTCGTCTTGATATGCAAA 457 Query 301 GCCTCTGATTAG 312 ||||||| |||| Sbjct 458 GCCTCTGGTTAG 469 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14477111712 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5