BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489050
Length=1322
Score E
Sequences producing significant alignments: (Bits) Value
AT5G22020.1 | Symbols: | Calcium-dependent phosphotriesterase ... 2001 0.0
> AT5G22020.1 | Symbols: | Calcium-dependent phosphotriesterase
superfamily protein | chr5:7287736-7289482 REVERSE LENGTH=1455
Length=1455
Score = 2001 bits (1083), Expect = 0.0
Identities = 1252/1333 (94%), Gaps = 14/1333 (1%)
Strand=Plus/Plus
Query 1 AGTGAGAGCTCTCTTGGCATTGCTCAACCACCAATGGATCTACCTA-CC--CTTCTTC-T 56
||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||| |
Sbjct 14 AGTGAGAGCTCTCTTTGCATTGCTCACCCACCAATGGATCTACCTACCCTTCTTCTTCTT 73
Query 57 -TCC-CCTTTTAAACCCT--AATTTTCTCTCTACC-TCAACAACGACTCAATCATGGCTT 111
||| ||||||||||||| || ||||||| | || ||||||||| | ||||||||||||
Sbjct 74 CTCCTCCTTTTAAACCCTAAAAGTTTCTCT-TTCCTTCAACAACGCCACAATCATGGCTT 132
Query 112 TGTTCTTATCTCCTAAAGCCATCACTCTTCTCTTTTTCTCCCTCTCCCTCGCACTCTACT 171
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 133 TGTTCTTATCTCCTAAAACCATCACTCTTCTCTTCTTCTCCCTCTCCCTCGCACTCTACT 192
Query 172 GCAGCATCGACCCTTTCCACCACTGCGCCATCTCCGATTTCCCCAATTTCGTCTCTCACG 231
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 193 GCAGCATCGATCCTTTCCACCACTGCGCCATTTCCGATTTCCCCAATTTCGTCTCTCACG 252
Query 232 AAGTTGTCTCTCCACGTCCCGATGAAGTTCCATGGGAGAGAGATTCGCAAAATTCACTTC 291
||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 253 AAGTTATCTCTCCACGTCCCGACGAAGTTCCATGGGAGAGAGATTCACAAAATTCACTTC 312
Query 292 AGAAATCAAAGATTCTGTTTCTCAACCAAGTACAAGGTCCAGAGAGCGTCGCGTTTGATT 351
|||||||||||||||||||| | |||||| | |||||||||||||||||||| |||||||
Sbjct 313 AGAAATCAAAGATTCTGTTTTTTAACCAAATCCAAGGTCCAGAGAGCGTCGCCTTTGATT 372
Query 352 CTCTCGGACGTGGTCCGTACACCGGAGTTGCTGATGGTAGGGTTTTGTTTTGGAATGGTG 411
|||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| |
Sbjct 373 CTCTCGGACGTGGTCCGTACACAGGCGTTGCTGATGGTAGGGTTTTGTTTTGGGATGGAG 432
Query 412 AGAAATGGACTGATTTCGCTTATACTTCGAGTAATCGATCGGAGATTTGTGATCCGAAGC 471
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 AGAAATGGATTGATTTCGCTTATACTTCGAGTAATCGATCGGAGATTTGTGATCCGAAGC 492
Query 472 CTTCTGCATTGAGTTACTTGAGGAATGAGCATATATGTGGTCGTCCTCTT-GGTCTTCGT 530
||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct 493 CTTCTGCTTTGAGTTACTTGAGGAATGAACATATATGTGGTCGTCCT-TTAGGTCTTCGT 551
Query 531 TTCGATAAGAGAACCGGAGATTTGTATATCGCCGACGCGTATATGGGACTTTTGAAAGTT 590
||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct 552 TTCGATAAGAGAACCGGAGATTTGTATATAGCTGATGCTTATATGGGACTTTTGAAAGTT 611
Query 591 GGTCCTGAAGGTGGCTTAGCAATGCCGCTTGTAACTGAAGCTGAGGGTGTGCCATTGGGT 650
|||||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct 612 GGTCCTGAAGGTGGTTTAGCAACGCCGCTTGTAACTGAAGCTGAAGGTGTGCCGTTGGGG 671
Query 651 TTTACTAATGATCTTGACATTGATGATGATGGAACTGTTTACTTTACAGATAGCAGTATC 710
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 672 TTTACTAATGATCTTGACATTGCTGATGATGGAACTGTTTACTTTACAGATAGCAGCATT 731
Query 711 AATTACCAGAGGAGGAATTTCTTGCAGCTCGTCTTCTCTGGAGACAACACTGGGAGAGTG 770
| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||
Sbjct 732 AGTTACCAGAGGAGGAACTTCTTGCAGCTCGTTTTCTCTGGAGACAATACTGGGAGGGTT 791
Query 771 CTAAAGTATGATCCAATAGCTAAGAAAGCTGTTGTTTTAGTCTCAAATCTTCAGTTTCCT 830
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 792 CTAAAGTATGATCCAGTAGCTAAGAAAGCTGTTGTTTTGGTCTCAAATCTTCAGTTTCCG 851
Query 831 AATGGTGTGTCTATCAGCAAAGACGGTTCTTTCTTTGTATTCTGTGAAGGCGATATTGGA 890
|||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct 852 AATGGTGTCTCTATCAGCAGAGACGGTTCTTTCTTTGTATTCTGCGAAGGAGATATTGGA 911
Query 891 AGCCTACGAAGATACTGGTTAAAAGGCGAGAAAGCTGGAACGACAGATGTGTTTGCGTTT 950
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 912 AGCCTACGAAGATACTGGTTGAAAGGCGAGAAAGCTGGAACGACAGATGTGTTTGCGTAT 971
Query 951 TTACCGGGGCATCCTGATAATGTAAGAACGAACCAAAACGGTGAATTTTGGGTAGCGCTT 1010
||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 972 TTACCAGGGCATCCTGATAACGTAAGAACCAACCAAAAGGGTGAATTTTGGGTAGCGCTT 1031
Query 1011 CATTGCAGACGCAACTACTACTCATACTTAATGTCAAGATATCCTAAGCTGAGGATGTTC 1070
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1032 CATTGCAGACGCAACTACTACTCATACTTAATGGCAAGATATCCTAAGCTGAGGATGTTC 1091
Query 1071 ATACTGAGACTGCCAATCACTGCAAGAACACACTACTCGTTCCAGATCGGGTTACGGCCG 1130
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1092 ATACTGAGACTGCCAATCACTGCGAGAACTCACTACTCGTTCCAGATAGGGTTACGGCCG 1151
Query 1131 CACGGATTGGTGGTTAAGTATAGTCCTGAAGGGAAGCTTATGCAGGTTCTTG-AAGATAG 1189
||||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct 1152 CACGGGTTGGTGGTTAAGTATAGTCCTGAAGGGAAGCTTATGCATGTT-TTGGAAGATAG 1210
Query 1190 TGACGGCAAAGTTGTGAGATCAGTAAGTGAAGTGGAAGAAAAAGATGGGAAGCTTTGGCT 1249
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1211 TGAAGGGAAAGTTGTGAGATCAGTAAGTGAAGTGGAAGAAAAAGATGGGAAGCTTTGGAT 1270
Query 1250 GGGAAGTGTGTTGATGAACTTTGTTGCTGTCTATGACCTCTGATTGCTTGACCTATACGT 1309
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1271 GGGAAGTGTGTTGATGAACTTTGTTGCTGTCTATGACCTCTGATTACTTGACCTATACGT 1330
Query 1310 AAACCACATCACT 1322
||||||| |||||
Sbjct 1331 AAACCACTTCACT 1343
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65059906320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5