BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg489123 Length=2254 Score E Sequences producing significant alignments: (Bits) Value AT5G22740.1 | Symbols: ATCSLA02, CSLA02, ATCSLA2, CSLA2 | cellu... 3284 0.0 AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellu... 359 7e-98 > AT5G22740.1 | Symbols: ATCSLA02, CSLA02, ATCSLA2, CSLA2 | cellulose synthase-like A02 | chr5:7554928-7560073 REVERSE LENGTH=2263 Length=2263 Score = 3284 bits (1778), Expect = 0.0 Identities = 2135/2295 (93%), Gaps = 73/2295 (3%) Strand=Plus/Plus Query 1 TTAAACCACAtttctccttctggctctctctcttcctaagttttctctctctttAAAACT 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 1 TTAAACCACATTTCTCCTTCTGGCTCTCTCTCTTCCTAAGTTTCCTCTCTCTTTAGAACT 60 Query 61 ATAGAGAGAGAAAAGCTTCCA-TTTTCTCAAGGCAAtctctctctctc--CATCATTC-C 116 ||||||||||||||| |||| |||||||||||||||||||||||||| | ||| || | Sbjct 61 GTAGAGAGAGAAAAGCCTCCATTTTTCTCAAGGCAATCTCTCTCTCTCTGCCTCA-TCTC 119 Query 117 ATAAACCCATT--------A---CA-C--A-A-A-AG-----C-CC-GCCATTGTTACAC 152 ||||||||||| | || | | | | || | || |||||||||||| Sbjct 120 ATAAACCCATTACACCAAAACCTCATCGTAGAGAGAGAAACACACCAACCATTGTTACAC 179 Query 153 TCAAAGAGAAGAGAAGAGACAAGGAAAAAATGGAAGGTGTATCACCAAAGTTTGTGTTGC 212 || |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 180 TCTAAGAGAAGAGAAGAGAGAAGG-AAAAATGGACGGTGTATCACCAAAGTTTGTGTTGC 238 Query 213 CGGAGACATTCGACGGTGTGAGGATGGAGATCACAGGGCAACTAGGCATGATCTGGGAGC 272 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 239 CGGAGACATTCGACGGCGTGAGGATGGAGATCACAGGCCAACTAGGCATGATCTGGGAGC 298 Query 273 TTGTAAAAGCACCAGTGATTGTCCCTCTTCTTCAATTAGCTGTTTACATCTGTTTGCTTA 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 TTGTAAAAGCACCAGTGATTGTCCCTCTTCTTCAATTAGCTGTTTACATCTGTTTGCTTA 358 Query 333 TGTCTGTCATGCTTTTATGTGAGAGGGTTTACATGGGAATCGTCATCGTCCTTGTCAAAC 392 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 359 TGTCTGTCATGCTTTTATGTGAGAGGGTTTACATGGGAATCGTCATCGTCCTCGTCAAAC 418 Query 393 TCTTCTGGAAAAAACCAGACAAACGTTACAAATTCGAGCCCATTCACGATGATGAAGAGC 452 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 419 TCTTCTGGAAAAAACCAGACAAACGTTACAAGTTCGAGCCCATTCACGATGATGAAGAGC 478 Query 453 TTGGCAGCTCCAATTTCCCAGTCGTCCTCGTACAAATCCCCATGTTCAACGAACGAGAGG 512 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 479 TTGGTAGCTCCAATTTCCCCGTCGTCCTCGTACAAATCCCCATGTTCAACGAACGAGAGG 538 Query 513 TTTATAAGCTATCAATAGGAGCGGCGTGTGGACTCTCTTGGCCGTCCGATCGTCTCGTGA 572 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 539 TTTATAAGCTATCAATAGGAGCGGCGTGTGGACTTTCCTGGCCGTCCGATCGTCTCGTGA 598 Query 573 TTCAAGTGTTAGATGACTCAACAGATCCTACTGTTAAGCAAATGGTGGAAATGGAGTGCC 632 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | Sbjct 599 TTCAAGTGTTAGATGACTCTACAGATCCTACTGTTAAGCAAATGGTGGAAGTGGAGTGTC 658 Query 633 AAAGATGGGCAAGTAAAGGAATCAATATTAGGTATCAAATAAGAGAAAATAGAGTTGGTT 692 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 659 AAAGATGGGCAAGTAAAGGAATCAATATTAGGTATCAAATAAGAGAGAATAGAGTTGGTT 718 Query 693 ACAAAGCCGGTGCTTTAAAGGAAGGACTCAAACGTAGTTATGTCAAACATTGCGAGTATG 752 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 719 ACAAAGCCGGTGCTTTAAAGGAAGGACTCAAACGTAGTTATGTCAAGCATTGCGAGTATG 778 Query 753 TTGTCATCTTCGACGCCGATTTTCAGCCGGAACCGGATTTTCTTCGCCGTAGCATTCCTT 812 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 779 TTGTCATCTTCGACGCCGATTTTCAGCCCGAACCTGATTTTCTTCGCCGTAGCATTCCTT 838 Query 813 TTCTCATGCACAATCCCAACATTGCCTTGGTTCAGGCCCGATGGCGGTTCGTAAATTCTG 872 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 839 TCCTCATGCACAATCCCAACATTGCCTTGGTTCAGGCTCGATGGCGGTTCGTAAATTCTG 898 Query 873 ATGAGTGCTTATTGACAAGGATGCAAGAAATGTCGTTGGATTACCATTTCACTGTTGAGC 932 |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct 899 ATGAGTGCTTATTGACGAGAATGCAAGAAATGTCATTGGATTACCATTTCACTGTTGAGC 958 Query 933 AAGAAGTCGGTTCATCGACACATGCTTTTTTCGGCTTCAACGGAACCGCCGGAATCTGGA 992 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 959 AAGAAGTGGGTTCATCAACACATGCTTTTTTCGGCTTCAACGGAACCGCCGGAATATGGA 1018 Query 993 GAATAGCGGCGATAAATGAAGCCGGCGGGTGGAAAGATAGGACCACCGTGGAAGATATGG 1052 |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| Sbjct 1019 GAATAGCGGCGATAAATGAAGCTGGTGGGTGGAAAGATCGGACCACCGTGGAAGATATGG 1078 Query 1053 ATCTCGCCGTCCGAGCTAGTCTTCGCGGCTGGAAATTTCTCTACCTCGGTGACCTTCAGG 1112 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 ATCTCGCCGTCCGAGCAAGTCTTCGCGGCTGGAAATTTCTCTACCTCGGTGACCTTCAGG 1138 Query 1113 TGAAAAGTGAACTTCCAAGTACTTTTAGAGCCTTCCGTTTTCAGCAACATAGATGGTCTT 1172 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 TGAAAAGTGAGCTTCCAAGTACTTTTAGAGCCTTCCGTTTTCAGCAACATAGATGGTCTT 1198 Query 1173 GTGGACCTGCAAATCTCTTTAGGAAAATGGTTATGGAGATCATAAGAAACAAGAAAGTGA 1232 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1199 GTGGACCTGCAAATCTCTTTAGGAAAATGGTTATGGAGATCGTAAGAAACAAGAAAGTGA 1258 Query 1233 GATTCTGGAAGAAAGTGTATGTGATCTACAGCTTCTTCTTTGTGAGGAAAATCATTGCAC 1292 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 1259 GATTCTGGAAGAAAGTGTACGTGATATACAGCTTCTTCTTTGTGAGGAAAATCATTGCAC 1318 Query 1293 ATTGGGTCACATTTTGTTTCTACTGCGTTGTTCTTCCTCTTACCATCCTCGTCCCCGAAG 1352 |||||||||||||||||||||||||||||||||||||||| || || |||||||| || | Sbjct 1319 ATTGGGTCACATTTTGTTTCTACTGCGTTGTTCTTCCTCTCACAATTCTCGTCCCGGAGG 1378 Query 1353 TTAAAGTTCCGATTTGGGGCTCCGTTTATATCCCTTCCATCATCACTATCCTCAACTCCG 1412 ||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |||| Sbjct 1379 TTAAAGTTCCGATTTGGGGTTCGGTTTATATCCCATCCATCATCACTATCCTCAATTCCG 1438 Query 1413 TCGGTACTCCAAGGTCGATTCATCTGCTGTTCTATTGGATTCTATTTGAGAATGTGATGT 1472 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1439 TCGGTACTCCAAGGTCAATTCATCTGCTGTTCTATTGGATTCTATTCGAGAATGTGATGT 1498 Query 1473 CGCTGCACCGGACAAAGGCCACTCTCATTGGTCTCTTTGAGGCTGGAAGGGCTAACGAAT 1532 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| | Sbjct 1499 CGCTGCACCGGACAAAGGCCACTCTCATTGGTCTGTTTGAGGCAGGAAGGGCTAACGAGT 1558 Query 1533 GGGTCGTGACTGCTAAGCTTGGAAGCGGTCAGAGTGCTAAAGGAAACACAAAAGGGCTCA 1592 |||| ||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| Sbjct 1559 GGGTAGTGACTGCTAAGCTTGGAAGCGGTCAGAGCGCTAAAGGAAACACTAAAGGGATCA 1618 Query 1593 AAAGGTTCCCAAGAATCTTCAAATTGCCTGATCGATTGAATACATTGGAGCTTGGATTTG 1652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1619 AAAGGTTCCCAAGAATCTTCAAATTGCCTGATCGATTGAATACATTGGAGCTTGGATTTG 1678 Query 1653 CGGCGTTCTTGTTCGTGTGTGGATGCTATGACTTTGTGCACGGGAAGAACAATTACTTCA 1712 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1679 CGGCTTTCTTGTTCGTGTGCGGATGCTATGACTTTGTGCACGGGAAGAACAATTACTTCA 1738 Query 1713 TCTACTTGTTTCTTCAGACAATGTCTTTCTTCATCAGTGGGCTTGGCTGGATCGGGACTT 1772 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1739 TCTACCTGTTTCTTCAGACAATGTCTTTCTTCATCAGTGGGCTGGGCTGGATCGGGACTT 1798 Query 1773 ATGTCCCGAGTTAGTAGAGTTGTGTTGTTACAGGGAGAAAAGAGAAGGTTATTAATTTTT 1832 ||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||| Sbjct 1799 ATGTCCCGAGTTAGTAG--TTGTGTTGTTTCAGAGAGAAAAGAGAATGTTATTAATTTT- 1855 Query 1833 CTGGAGAAATAAAGACAATTTT-A---AA-TGACAAAGGAAAATTGATAGGGGAGATAGA 1887 || ||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct 1856 CTTGAGAAATAAAGACAATTTTCATTGAAATGACAAAGGAAAATTGATAGGGGAGATAGA 1915 Query 1888 GACGTACCGGTAACAA---GTAGGAAGAAAGGAGA---CTTTTATCAAAAGACAAGGAAA 1941 |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||| Sbjct 1916 GACGTACCGGTAACAACAAGTAGGAAGAAAGGAGAAGACTTTTATCAAA-GACCAGGAAA 1974 Query 1942 GAGGAGAAACTCCGAAGTGtttcttttgatttattttcaatttttctgtgttttatttac 2001 |||||||| |||| ||| ||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1975 GAGGAGAAGCTCC-AAGGGTT-CTTTTGATTTATTTTTAATTTTTCTGTGTTTTATTTA- 2031 Query 2002 aaatatttagctatgggatttatttGTGATTCAGTTATTGTGAGACTTCAAtttttgttc 2061 ||| ||||||||||||| ||||||||||| |||||||| || |||||| |||| Sbjct 2032 ---TAT--AGCTATGGGATTT----GTGATTCAGTTGTTGTGAGATTTTAATTTTCGTTC 2082 Query 2062 tttctttttctttttcttttcttggtttttgggttttttttt-tttt-aaagtgttagtt 2119 ||| ||||| | ||| | ||||||||||| |||||| |||| ||||||||||| Sbjct 2083 TTTGTTTTT-TATTT-T------GGTTTTTGGGTATTTTTTCGTTTTGAAAGTGTTAGTC 2134 Query 2120 ttttttttcttttgttttttATGATTTAGAATTCAAGGTTCTGCTTGAGCTACAAGTGTT 2179 ||||| || || |||||| ||||||||||||||||| |||||| ||||||||||||||| Sbjct 2135 TTTTTGTT-TT--GTTTTT-ATGATTTAGAATTCAAGATTCTGCGTGAGCTACAAGTGTT 2190 Query 2180 TAGATTGATGCAAGGGTTCAAAATCCCTAGTTGTCATCAACAGTGTATCCATTTTATAGT 2239 |||||||||||| |||||||||| ||| ||||||||||||| | ||||||||||||||| Sbjct 2191 -AGATTGATGCAAAGGTTCAAAATTCCTTGTTGTCATCAACAAT-TATCCATTTTATAGT 2248 Query 2240 AATTGATTTACAGTC 2254 |||| |||||||||| Sbjct 2249 AATTAATTTACAGTC 2263 > AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellulose synthase-like A3 | chr1:8333020-8336385 FORWARD LENGTH=2015 Length=2015 Score = 359 bits (194), Expect = 7e-98 Identities = 822/1116 (74%), Gaps = 80/1116 (7%) Strand=Plus/Plus Query 469 CCCAGTCGTCCTCGTACAAATCCCCATGTTCAACGAACGAGAGGTTTATAAGCTATCAAT 528 |||| | || ||| | || ||||| |||| ||| ||| |||||||| | || |||| || Sbjct 546 CCCAATGGTTCTCATTCAGATCCCAATGTACAATGAAAAAGAGGTTTGTCAGTTATCTAT 605 Query 529 AGGAGCGGCGTGTGGACTCTCTTGGCCGTCCGATCGTCTCG-TGA-TTCAAGT-GTTAGA 585 |||||| || ||| |||| |||||||| | ||||| | | | | ||||||| || || Sbjct 606 AGGAGCAGCCTGTAGACTTTCTTGGCCATTGGATCGAAT-GAT-AGTTCAAGTACTT-GA 662 Query 586 TGACTCAACAGATCCTA-CT-GTTAAGCAAATGGTGGAAAT--GGAGTGCCA-AAGATGG 640 ||| || |||||||| | || | |||| || |||| | ||| ||| || | || |||| Sbjct 663 TGATTCCACAGATCC-AGCTAG-TAAGGAATTGGT-G-AATGCGGAATGTGATAA-ATGG 717 Query 641 GCAAGTAAAGGAATCAATATTAGGTATCA-A-ATAAGAGAAAATAGAGTTGGTTACAAAG 698 || || ||||| || || | || | ||| | || ||||| || ||| |||| ||||||| Sbjct 718 GCGAGGAAAGGTATAAACA-TA-ATGTCAGAGATTAGAGACAACAGAATTGGATACAAAG 775 Query 699 CCGGTGCTTTAAAGGAAGGACTCAAACGTAGTTATGTCAAACATTGCGAGTAT-GTTGTC 757 | || || ||||||| |||| | | | | ||||| ||||| ||||| | | || | | Sbjct 776 CAGGAGCATTAAAGGCAGGAATGATGCACAACTATGTGAAACAATGCGAAT-TCGTCGCC 834 Query 758 ATCTTCGACGCCGATTTTCAGCCGGAACCGGATTTTCTTCG-CCGTAGCATTCCTTTTCT 816 || ||||| || ||||||||||| || || || |||||| | || | |||||||||||| Sbjct 835 ATTTTCGATGCTGATTTTCAGCCTGATCCTGACTTTCTT-GAACGAACCATTCCTTTTCT 893 Query 817 CATGCACAATCCCA--ACAT-TGC-CTTGGTTC-AGGCCCGATGGCGGTTCGTAAATTCT 871 || ||||| ||| | || | | ||| |||| | | ||| ||| ||| || ||| | Sbjct 894 TATTCACAA--CCATGAAATCT-CTCTT-GTTCAATG-CCGTTGGAAGTTTGTGAATGCA 948 Query 872 GATGAGTGCTTATTGACAAGGATGCAAGAAATGTCGTTGGATTACCATTTCACT-GTTGA 930 | ||||||||| ||||||| |||||||| ||||| | | |||||||| | | ||| Sbjct 949 AACGAGTGCTTAATGACAAGAATGCAAGAGATGTCACTAAACTACCATTT-TGTGGCTGA 1007 Query 931 GCAAGAAGTC-GGTTCATCGACACATGCTTT-TTTCGGCTTCAACGGAACCGCCGGAATC 988 ||||||| || || || || | ||||||||| ||| || ||||| |||||||| || | Sbjct 1008 GCAAGAA-TCTGGATCTTCAATACATGCTTTCTTT-GGATTCAATGGAACCGCGGGTGTA 1065 Query 989 TGGAGAATAGCGGCGATAAATGAAGCCGGCGGGTGGAAAGATAGGACCACCGTGGAAGAT 1048 |||||||| || || |||| ||||| || || ||||||||| | || ||||| |||||| Sbjct 1066 TGGAGAATCGCAGCTTTAAACGAAGCTGGAGGATGGAAAGATCGAACAACCGTAGAAGAT 1125 Query 1049 ATGGATCTCGCCGTCCGAGCTAGTCTTCGCGGCTGGAAATTTCTCTACCTCGGTGACCTT 1108 |||||| | || || ||||| |||||| || ||||||||| |||| || ||| | | Sbjct 1126 ATGGATTTAGCAGTAAGAGCTTGTCTTCATGGTTGGAAATTTGTCTATGTCCATGA-CGT 1184 Query 1109 C-AGGTGAAAAGTGAACTT-CCAAGTACTTTTAGAGCCTTCCGTTTTCAGCAACATAGAT 1166 | ||||||||| |||| || |||||||| || | ||| | | | |||||||||||||||| Sbjct 1185 CGAGGTGAAAAATGAA-TTGCCAAGTACATTCAAAGCATACAGGTTTCAGCAACATAGAT 1243 Query 1167 GGTCTTGTGGACCTGCAAATCTCTTTAGGAAAATGGTTATGGAGATCATA-AGAAACAAG 1225 ||||||||||||| || ||||| | ||||| ||| ||||| ||| || |||| |||| Sbjct 1244 GGTCTTGTGGACCAGCTAATCTATGGAGGAAGATGACAATGGAAATCTTACAGAA-CAAG 1302 Query 1226 AAAGTGA-GATTCTGGAAGAAAGTGTATGTGATCTACAGCTTCTTCTTTGTGAGGAAAAT 1284 |||||| | |||||||||| ||||| | || |||| |||||||| | ||||| || Sbjct 1303 AAAGTGTCGGC-CTGGAAGAAATTGTATCTCATATACAATTTCTTCTTCATAAGGAAGAT 1361 Query 1285 CATTG--CACAT-TGGGTCACATTTTGT-TTCTACTG-CGTTGTTCTT-CCT-CTTACCA 1337 | | ||||| | |||||||| || |||||||| | | | | || || | || Sbjct 1362 TGTAGTACACATCT---TCACATTT-GTCTTCTACTGTC-T-GATATTACCAACA-ACTG 1414 Query 1338 TCCTCGTCCCCGAAGTTA-AAGTTCCGATTTGGGGCTCC-GTTTATATCCCTTCCATCA- 1394 | || |||| || | | ||||||| | |||| | | |||||| | ||| | | || Sbjct 1415 TGCTATTCCCTGA-GCTCCAAGTTCCTAAATGGG-CAACTGTTTATTTTCCTACTA-CAA 1471 Query 1395 TCACTATCCTCAACTCCGTCGGTACTCCAAGGTCGATTC-ATCTGCT-GTTCTATTGGAT 1452 |||||||||| ||| | ||| ||| || | || | || |||| || || || |||||| Sbjct 1472 TCACTATCCTTAACGCAATCGCTACACCTCGATC-ACTCCATCTTCTTGT-CTTTTGGAT 1529 Query 1453 TCT-ATTTGAGAATGTGATGTCGCTGCACCGGACAAAGGCCAC-TCTCATTGG-TCT-CT 1508 || ||| |||||||| |||||| |||| || ||||| || || | |||| || | | || Sbjct 1530 -CTTATTCGAGAATGTAATGTCGATGCATCGCACAAAAGCGACAT-TCATCGGGT-TACT 1586 Query 1509 TTGAGGCTGGAAGGGCTAACGAATGGGTCGTGACTG 1544 ||||| ||| ||| |||||||||||| || |||| Sbjct 1587 A-GAGGCAGGACGGGTTAACGAATGGGTTGTTACTG 1621 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111846814260 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5