BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg489137
Length=1678
Score E
Sequences producing significant alignments: (Bits) Value
AT5G22840.1 | Symbols: | Protein kinase superfamily protein | ... 2361 0.0
AT3G44850.1 | Symbols: | Protein kinase superfamily protein | ... 1303 0.0
AT3G53030.1 | Symbols: SRPK4 | ser/arg-rich protein kinase 4 | ... 248 1e-64
> AT5G22840.1 | Symbols: | Protein kinase superfamily protein
| chr5:7630717-7633223 REVERSE LENGTH=2123
Length=2123
Score = 2361 bits (1278), Expect = 0.0
Identities = 1536/1654 (93%), Gaps = 43/1654 (3%)
Strand=Plus/Plus
Query 1 GGCGATGGCGGATGAGAAGAACGGTGGACGTGTGAGTGACGCTAGTGACTACTCGTCTGA 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct 117 GGCGATGGCGGATGAGAAGAACGGTGGACGTCTGAGTGACGCTAGTGACTACTCATCAGA 176
Query 61 GGACGAAGGAACAGAAGATTACAGAAGAGGAGGTTACCATGA-GGTTCGAGTCGGTGATA 119
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 177 GGACGAAGGAACAGAAGATTACAGAAGAGGAGGTTACCAT-ACGGTTCGAGTCGGTGATA 235
Query 120 CTTTTAAGAATGGTTCTTATGTCATTCAGAGTAAGCTTGGTTGGGGACATTTCTCCACTG 179
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 236 CTTTTAAGAATGGATCTTATGTCATTCAAAGTAAGCTTGGTTGGGGACATTTCTCCACTG 295
Query 180 TCTGGCTCTCTTGGGACACTCTAAAATCTCGATACGTAGCTTTGAAAATCCAGAAGAGTG 239
|||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 296 TCTGGCTCGCTTGGGACACTCTCAACTCTCGATACGTAGCTTTGAAAATCCAGAAGAGTG 355
Query 240 CTCAGCACTACACTGAGGCGGCAATGGATGAGATAAAGATCTTGAAACAGATTGCGGAAG 299
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 356 CTCAGCACTACACTGAAGCGGCCATGGATGAGATAAAGATATTGAAACAGATTGCAGAAG 415
Query 300 GTGACGCCGAAGATAAGAAGTGTGTTGTGAAGCTTCTTGATCATTTCAAGCACGCAGGTC 359
| || || |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 416 GCGATGCGGAAGATAAGAAGTGTGTTGTGAAGCTTCTTGATCATTTCAAGCATGCTGGTC 475
Query 360 CTAATGGGCAACATGTTTGTATGGTCTTTGAGTATTTGGGAGATAACCTCTTGTCGGTTA 419
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 476 CTAATGGGCAACATGTTTGTATGGTTTTTGAGTATTTGGGAGATAACCTCTTGTCGGTTA 535
Query 420 TCAAGTACAGCGATTACCGAGGGGTTCCTCTTCATATGGTTAAAGAGCTCTGTTTTCATA 479
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 536 TCAAGTACAGTGATTACCGAGGGGTTCCTCTTCATATGGTTAAAGAGATCTGTTTTCATA 595
Query 480 TTTTGGTTGGGTTGGATTATCTTCATCGTGAGCTTTCGATTATTCATACTGATATCAAGC 539
| || ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 596 TCTTAGTTGGTTTGGATTATCTTCATCGTGAACTTTCTATTATTCATACTGATATCAAGC 655
Query 540 CAGAGAACATTCTGCTTTGTTCCACTATTGACCCTGAAGCAGATGCTCGGAAATCGGGGA 599
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 CGGAGAATATTCTGCTTTGTTCCACTATTGACCCTGAAGCAGATGCTCGGAAATCGGGGA 715
Query 600 TTCCTCTTGTTCTTCCAACTGCT-AAGGACAAGACTGTTCTTGAGAGA-CAGGCTGAAAA 657
||||||||||||||||||||| | ||||||||| |||||| ||||||| || | ||||||
Sbjct 716 TTCCTCTTGTTCTTCCAACTG-TGAAGGACAAGGCTGTTCCTGAGAGACCA-GTTGAAAA 773
Query 658 GGAGAAACCCAAGAGTTACACGTACAGTGCGGATTTGACTAAGAATCAGAAAAAGAAGAT 717
|||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct 774 AGAGAAACCTAAGAGTTATACGTATAGTGCGGATTTGACTAAGAATCAGAAGAAGAAGAT 833
Query 718 TCGGAAGAAAGCTAAGAAAGTGGAAGGTCAAGGATGTGGTGGAGAAGAAGGCTCAGAGGA 777
|| |||||||| | || | || | || | ||||| ||||||||
Sbjct 834 CCGTAAGAAAGC--------T--AA-G--AA--A----GT---G--GAAGGTTCAGAGGA 869
Query 778 TAATGAGAGAGA---TTCTAACTCTGAGGCAAGACAAAACGGAAATGCAACGGTGGAGAG 834
||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||
Sbjct 870 AAATGAGAGAGACTCTTCTAACTCTGAGGCAAGACCAAATGGAAATGCAACTGTGGAGAG 929
Query 835 GTCGGAAGAGAGTTCTGAAAGAGTAAAAGATGCAGAGAATGTTAGTCAAAAGAGCCGGGG 894
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 GTTGGAAGAGAGTTCTGAAAGAGTAAAAGATGCAGAGAATGTTAGTCAAAAGAGCCGGGG 989
Query 895 CAATAGGAGAGGAAGTCGATCCACGCGGCAAAAGTTACTTGCGGATGTTGATCGGAAATG 954
|||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 990 AAATAGGAGAGGAAGCCAATCCACGAGGCAAAAGTTACTTGCGGATGTTGATCGGAAATG 1049
Query 955 CAAGTTAGTGGATTTTGGGAATGCTTGTTGGACTTATAAACAGTTTACGAGTGATATTCA 1014
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050 CAAGTTGGTGGATTTTGGGAATGCTTGTTGGACTTATAAACAGTTTACGAGTGATATTCA 1109
Query 1015 GACAAGACAGTACCGGTGTCCTGAGGTTGTTCTTGGCTCAAAATACTCAACCTCAGCGGA 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GACAAGACAGTACCGGTGTCCTGAGGTTGTTCTTGGCTCAAAATACTCAACCTCAGCGGA 1169
Query 1075 TATGTGGTCATTTGCTTGCATTTGTTTTGAGCTTGCCACCGGAGATGTTCTATTTGATCC 1134
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1170 TATGTGGTCATTTGCTTGCATTTGTTTTGAGCTTGCCACCGGAGATGTTCTATTCGATCC 1229
Query 1135 TCACAGTGGTGAAAACTTTGAGCGGGATGAGGATCACTTGGCATTGATGATGGAGCTTCT 1194
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1230 TCACAGTGGTGAAAACTTTGAGCGAGATGAGGATCACTTGGCATTGATGATGGAGCTTCT 1289
Query 1195 TGGGATGATGCCACGAAAGATTGCATTAGGTGGACGCCATTCGCGGGATTTCTTCAACCG 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 CGGGATGATGCCACGAAAGATTGCATTAGGTGGACGCCATTCGCGGGATTTCTTCAACCG 1349
Query 1255 ACAGGGTGAACTGA-GGCACATCAGGCGGTTACGGTTTTGGCCACTTAGCAAGGTCTTAA 1313
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350 ACAGGGTGAACT-ACGGCACATCAGGCGGTTACGGTTTTGGCCACTTAGCAAGGTCTTAA 1408
Query 1314 CAGATAAATATGACTTCAGCGAGGAAGACGCAATTGCTTTGCAAGATTTCATCATTCCCA 1373
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1409 CAGATAAATATGACTTCAGCGAGGAAGACGCAATTGCTATGCAAGATTTCATCACTCCCA 1468
Query 1374 TTCTTGAATTTGTACCTGAGAAGAGACCGACGGCTGCTCAGTGCCTAACGCACCCATGGA 1433
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1469 TTCTTCAATTTGTACCTGAGAAGAGACCGACGGCTGCTCAGTGCCTAACGCACCCATGGT 1528
Query 1434 TGAATCCGGTCCCTAAATCACTGAAACCGTCACCGAGTCCACAAAAACCCAAAGATGAAG 1493
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct 1529 TGAATCCGGTCCCTAAATCACTGAAACCGTCATCGAGTCCACAAAATCCCAAAGAAGAAG 1588
Query 1494 AAGT--AC-CA-C--ATGAGAATAAA-ACGAAGGAAAATGATGAGAGGGAAGCCATGGAG 1546
||| | | | ||||| ||||| | |||||||| | |||||||||||||||||||
Sbjct 1589 AAGAGGAAGCGTCGGATGAGGATAAAGAT-AAGGAAAAGGTTGAGAGGGAAGCCATGGAG 1647
Query 1547 GTTGGTGTTGGGAATATCGCCATTGATGGCTCAGAACCAAAGACCTCAGCAAGAGAAGGT 1606
| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1648 GCAGGTGTTGGAAATATCGCCATTGATGGCTCGGAAAGAAAGACCTCAGCAAGAGAAGGT 1707
Query 1607 CGTCAATCTGCTCGTGATCTTCACACTTaaaaaa 1640
|||||||| ||||||||||||| |||||| |||
Sbjct 1708 CGTCAATCAGCTCGTGATCTTCGTACTTAAGAAA 1741
> AT3G44850.1 | Symbols: | Protein kinase superfamily protein
| chr3:16374617-16376931 REVERSE LENGTH=1605
Length=1605
Score = 1303 bits (705), Expect = 0.0
Identities = 1347/1643 (82%), Gaps = 100/1643 (6%)
Strand=Plus/Plus
Query 5 ATGGCGGATGAGAAGAACGGTGGACGTGTGAGTGACGCTAGTGACTACTCGTCTGAGGAC 64
|||||||| || || ||| |||||||||| ||||| ||||| |||||||| ||||||
Sbjct 1 ATGGCGGAGGACAAAAACAACGGACGTGTGAATGACGAAAGTGAGTACTCGTCGGAGGAC 60
Query 65 GAAGGAACAGAAGATTA-CAGAAGAGGAGGTTACCATGA-GGTTCGAGTCGGTGATACTT 122
||||||||||| ||||| |||| |||||| |||||| | || |||||||||||||||
Sbjct 61 GAAGGAACAGAGGATTATAAGAA-AGGAGGATACCAT-ACAGTAAGAGTCGGTGATACTT 118
Query 123 TTAAGAATGGTTCTTATGTCATTCAGAGTAAGCTTGGTTGGGGACATTTCTCCACTGTCT 182
|||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||| |
Sbjct 119 TTAAGAATGGAGCTTATGTGATTCAGAGTAAACTTGGTTGGGGGCATTTCTCCACTGTTT 178
Query 183 GGCTCT-CTTGGGACACTCTAA-AATCTCGATACGTAGCTTTGAAAATCCAGAAGAGTGC 240
|||| | ||||||| || | || |||| || || |||||||||||| | |||||||||||
Sbjct 179 GGCT-TGCTTGGGATACGC-AAGAATCGCGTTATGTAGCTTTGAAAGTTCAGAAGAGTGC 236
Query 241 TCAGCACTACACTGAGGCGGCAATGGATGAGATAAAGATCTTGAAACAGATTGCGGAAGG 300
||| || || || ||||| |||||||||||||||||||| ||||||||||| || |||||
Sbjct 237 TCAACATTATACAGAGGCAGCAATGGATGAGATAAAGATTTTGAAACAGATAGCTGAAGG 296
Query 301 TGACGCCGAAGATAAGAAGTGTGTTGTGAAGCTTCTTGATCATTTCAAGCACGCAGGTCC 360
|||| | | ||||||||||||||||| ||||| || |||||||||||||| | |||||
Sbjct 297 TGACTCGGGTGATAAGAAGTGTGTTGTAAAGCTACTGGATCATTTCAAGCATACGGGTCC 356
Query 361 TAATGGGCAA-CATGTTTGTATGGTCTTT-GAGTATTTGGGAGATAACCTCTTGTCGGTT 418
||||||| || |||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct 357 TAATGGG-AAGCATGTTTGTATGGT-TTTCGAGTATTTGGGAGATAACCTTTTGTCGGTT 414
Query 419 ATCAAGTACAGCGATTACCGAGGGGTTCCTCTTCATATGGTTAAAGAGCTCTGTTTTCAT 478
|| |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 415 ATTAAGTACAGTGATTACCGAGGGGTTCCTCTTCACATGGTTAAAGAGCTTTGTTTTCAT 474
Query 479 ATTTTGGTTGGGTTGGATTATCTTCATCGTGAGCTTTCGATTATTCATACTGATATCAAG 538
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 475 ATTTTGGTTGGGTTGGATTATCTTCATCGTGAGCTTTCTATTATTCATACTGATTTAAAG 534
Query 539 CCAGAGAACATTCTGCTTT-GTTCCACTATTGACCC-T-GAAGCAGATGCTC-GGAAATC 594
|| ||||| ||||||||| || | || ||||| || | || | ||||| | ||| |||
Sbjct 535 CCGGAGAATGTTCTGCTTTTGT-CTACGATTGATCCGTCGA-G-AGATG-TGAGGAGATC 590
Query 595 GGG-GATTCCTCTTGTTCTTCCAACTG-CTAAGGACAAGACTGTT-CTTGAGAGACAGGC 651
|| | |||| |||||||| || | | | |||||||||| |||| || ||| | | |
Sbjct 591 AGGTG-TTCCACTTGTTCTGCCTA-TAACCAAGGACAAGATTGTTTCT-GAGT--CTG-C 644
Query 652 TGA-AAAGGAGAAACCCAAGAGTTACACGTACAGTGCG-GATTTGACTAAGAATCAGAAA 709
|| ||| ||||| || ||||| ||||||| || | |||||||| |||||||||||
Sbjct 645 TGTTAAACCTGAAACTAAA-AGTTATACGTACAATG-GTGATTTGACAAAGAATCAGAAG 702
Query 710 AAGAAGATTCGGAAGAAAGCTAAGAAAGTGGAAGG-TCAAGGATGT-GGTGGAGAAGAAG 767
||||||||||| |||||||| ||||| |||| || ||||| || | |||||||| ||||
Sbjct 703 AAGAAGATTCGTAAGAAAGCGAAGAAGGTGGT-GGCTCAAG-ATTTTGGTGGAGAGGAAG 760
Query 768 GCTCAG-AGGATAA-TGAGAGAGATTCTAACTCTGAGGCAAGACA-AAACGGAAATGCAA 824
|| | | || || |||||||||||||||||| || |||||| | ||| || ||| | |
Sbjct 761 -CTTTGGAAGA-AAGTGAGAGAGATTCTAACTCCGAAGCAAGA-ATAAATGGCAATTCCA 817
Query 825 CGGTGGAGAGGTCGGAAGAGA-GTTCTGA-AAGAGTAA---AAGATG------C-AGAGA 872
| || ||||| || |||| || |||| | |||| ||| ||| || | |||||
Sbjct 818 CCGTAGAGAGATCTGAAG-GAAGTTCC-ACAAGATTAATGGAAGGTGAAGAAGCCAGAGA 875
Query 873 -ATGT-TAGTCAAAA-GA--GC-CGGGGCAATAGGAGAGGAAGTCGATCCACGCGGCA-A 925
| | || ||||| || | ||||| | |||||||||||| |||||||| |||| |
Sbjct 876 GAAGGCTAA-CAAAAAGAATGGTCGGGGTAGTAGGAGAGGAAGCCGATCCACAAGGCAGA 934
Query 926 AAGTTACTTGCG-GATGTTGA-TCGGAAATGCAAGTTAGTGGATTTTGGGAATGCTTGTT 983
|| ||||| | | ||| | || | | |||||||| ||||| |||||||||||||||||||
Sbjct 935 AA-TTACT-GAGTGATATAGAGT-GCAAATGCAAATTAGTAGATTTTGGGAATGCTTGTT 991
Query 984 GGACTTATAAACAGTTTACGAGTGATATTCAGACAAGACAGTACCGGTGTCCTGAGGTTG 1043
|||| ||||||||||| || || |||||||||||||||||||| || ||||| |||||||
Sbjct 992 GGACATATAAACAGTTCACAAGCGATATTCAGACAAGACAGTATCGATGTCCAGAGGTTG 1051
Query 1044 TTCTTGGCTCAAAATACTCAACCTCAGCGGATATGTGGTCATTTGCTTGCATTTGTTTTG 1103
|||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| |
Sbjct 1052 TTCTTGGCTCAAAATACTCAACTTCTGCAGATATGTGGTCCTTTGCTTGTATTTGTTTCG 1111
Query 1104 AGCTTGCCACCGGAGATGTTCTAT-TT-GATCCTCACAGTGGTGAAAACTT-TGAGCGGG 1160
|||| |||||||||||||| || | || |||||||||||||||||||| || ||| ||||
Sbjct 1112 AGCTGGCCACCGGAGATGT-CT-TGTTCGATCCTCACAGTGGTGAAAA-TTATGACCGGG 1168
Query 1161 ATGAGGATCACTTGGCATTGATGATGGAGCTTCTTGGGATGATGCCACGAAAGATTGCAT 1220
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1169 ATGAGGATCACCTGGCATTGATGATGGAGCTTCTAGGGATGATGCCACGAAAGATTGCAT 1228
Query 1221 TAGGTGGACGCCATTCGCGGGATTTCTTCAACCGACAGGGTGAACTGAGGCACATCAGGC 1280
||||||| || | || || ||||||||||||||||| ||||| || ||||||||| |||
Sbjct 1229 TAGGTGGTCGATACTCACGAGATTTCTTCAACCGACAAGGTGAGCTAAGGCACATCCGGC 1288
Query 1281 GGTTACGGTTTTGGCCACTT-AGCAAGGTCTTAACAG-ATAAATATGACTTCAGCGAGGA 1338
|||| ||||||||||| | | ||||| ||||| | || | |||||||| ||||||||| |
Sbjct 1289 GGTTGCGGTTTTGGCC-CATCAGCAAAGTCTTGA-AGGAGAAATATGATTTCAGCGAGCA 1346
Query 1339 AGACGCAATTG-CTT-TGCAAGATTTCATCATTCCCA-TTCTTGAATTTGTACCTGAGAA 1395
||||||| | | | | || |||||| | | || || ||||||||||||| ||||||||
Sbjct 1347 GGACGCAAAAGACATGT-CA-GATTTCTT-AGTCACAATTCTTGAATTTGTGCCTGAGAA 1403
Query 1396 GAGACCGACGGCTGCTCAGTGCCTAACGCACCCATGGATGAATCC-GGTCCCTAAATCAC 1454
|||||| || || || || ||||||| ||||||||| | ||||| || ||| | || |
Sbjct 1404 GAGACCAACAGCCGCCCAATGCCTAAAACACCCATGGTTCAATCCTGG-CCCGAGATTGC 1462
Query 1455 T-GAAACCGTCACCGAGTCCACAAAAACCCAAAG-AT--GAAGAAGTACCA-CA--TGAG 1507
| ||| ||||||| || |||||| |||| |||| | ||||||| | || || ||||
Sbjct 1463 TTGAA-CCGTCACTGAAACCACAACAACCAAAAGGAGAAGAAGAAGGAGCAGCAAATGAG 1521
Query 1508 AATA-A-AACGAAGGAAAATGATGAGAGGGAAGCCATGGAGGTTGGTGTTGGGAATATCG 1565
|| | | || |||||||| || || || ||||| ||||| | |||||| ||||||||||
Sbjct 1522 AACATAGAA--AAGGAAAAGGACGAAAGAGAAGCAATGGAAGCTGGTGTAGGGAATATCG 1579
Query 1566 CCATTGATGGCTCAGAACCAAAG 1588
| ||||||| ||| ||||| |||
Sbjct 1580 CTATTGATGTCTCTGAACCGAAG 1602
> AT3G53030.1 | Symbols: SRPK4 | ser/arg-rich protein kinase 4
| chr3:19662281-19664505 FORWARD LENGTH=1864
Length=1864
Score = 248 bits (134), Expect = 1e-64
Identities = 376/491 (77%), Gaps = 23/491 (5%)
Strand=Plus/Plus
Query 968 TTTGGGAATGCTTGTTGGACTTATAAACAGTTTACGAGTGATATTCAGACAAGACAGTAC 1027
||||| ||||| |||||||| || |||||||| || || || ||||| || ||||||||
Sbjct 1062 TTTGGTAATGCGTGTTGGACATACAAACAGTTCACAAGCGACATTCAAACGAGACAGTAT 1121
Query 1028 CGGTGTCCTGAGGTTGTTCTTGGCTCAAAATACTCAACCTCAGCGGATATGTGGTCATTT 1087
||||||| || || | ||||| || |||||||| || || || ||| | ||||||||
Sbjct 1122 AGGTGTCCAGAAGTAATCCTTGGATCTAAATACTCTACATCTGCAGATCTCTGGTCATTC 1181
Query 1088 GCTTGCATTTGTTTTGAGCTTGCCACCGGAGATGTTCTATTTGATCCTCACAGTGGTGAA 1147
|| ||||| |||||||| |||| ||| |||||||| ||||||||||| || ||||| ||
Sbjct 1182 GCGTGCATATGTTTTGAACTTGTCACTGGAGATGTGCTATTTGATCCCCATAGTGGCGAC 1241
Query 1148 AACTT-TGAGCGGGATGAGGATCACTTGGCAT-TGATGATGGAGCTTCTTGGGATGATGC 1205
|| || ||| | ||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 1242 AA-TTATGATAGAGATGAGGATCACTTGGC-TCTGATGATGGAGCTTCTTGGGATGATGC 1299
Query 1206 CACGAAAGATTGCATTAGGTGGACGCCATTCGCGG-GATTTCTTCAACCGACAGGGTGAA 1264
|||| ||||| ||||| ||||| ||| | || | | |||||||| ||| | || |||||
Sbjct 1300 CACGCAAGATAGCATTGGGTGGCCGCTACTC-CAGAGATTTCTTTAACAGGCATGGTGAT 1358
Query 1265 CTGAGGCACATCAGGCGGTTACGGTTT-TGGCCACTT-AGCAAGGT-CTTAACAGATAAA 1321
|| | |||||||| | | || ||| ||||| | | | ||| || || | | || ||
Sbjct 1359 CTTCGACACATCAGAAGACTGCG-TTTCTGGCC-CATGAACAAAGTGCTGACC-GAGAAG 1415
Query 1322 TATGACTTCAGCGAGGAAGACGCAATTG-CTTTGCAA-GATTT-CATCATTCCCATTCTT 1378
|| || ||||| ||| |||| |||| || | | | | ||||| | | ||| ||||||
Sbjct 1416 TACGAGTTCAGTGAGCAAGATGCAAATGACCT-G-AGTGATTTTCTTGTTTCG-ATTCTT 1472
Query 1379 GAATTT-GTACCTGAGAAGA-GACCGACGGCTGCTCAGTGCCTAACGCACCCATGGATGA 1436
|| ||| || || ||||| | |||| || || |||||||| || || || ||||| |
Sbjct 1473 GA-TTTCGTCCCAGAGAA-ACGACCAACTGCAGCTCAGTGTCTGTTACATCCTTGGATCA 1530
Query 1437 A-TCCGGTCCC 1446
| || ||||||
Sbjct 1531 ACTCTGGTCCC 1541
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82931300340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5